Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 SNORA80E-201ENST00000384744 137 ntBASIC2.62□□□□□ -1.99
CREB3L3Q68CJ9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.62□□□□□ -1.99
CREB3L3Q68CJ9 CST2P1-201ENST00000425770 87 ntBASIC2.62□□□□□ -1.99
CREB3L3Q68CJ9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.62□□□□□ -1.99
CREB3L3Q68CJ9 RNU1-142P-201ENST00000516682 145 ntBASIC2.62□□□□□ -1.99
CREB3L3Q68CJ9 IGLV3-17-201ENST00000519099 244 ntBASIC2.62□□□□□ -1.99
CREB3L3Q68CJ9 AC024995.1-201ENST00000523014 93 ntBASIC2.62□□□□□ -1.99
CREB3L3Q68CJ9 SNORD115-3-201ENST00000363100 82 ntBASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 Y_RNA.121-201ENST00000363309 113 ntBASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 RNU6-103P-201ENST00000363686 107 ntBASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 RNU6-1048P-201ENST00000364054 107 ntBASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 RNU6-923P-201ENST00000364753 107 ntBASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 RNU6-117P-201ENST00000365415 107 ntBASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 RNU6-493P-201ENST00000391321 108 ntBASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 RNU6-1186P-201ENST00000410429 97 ntBASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 RNU4-53P-201ENST00000410828 140 ntBASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 RNU7-94P-201ENST00000459576 63 ntBASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 AC117454.1-201ENST00000491120 168 ntBASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 RPL23AP54-201ENST00000495129 419 ntBASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 YWHAEP4-201ENST00000505390 198 ntBASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 RNU7-99P-201ENST00000516271 62 ntBASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 AC121758.2-201ENST00000553271 193 ntBASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 AC127455.1-201ENST00000565496 145 ntBASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 MIR338-201ENST00000636369 67 ntBASIC2.61□□□□□ -1.99
CREB3L3Q68CJ9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CREB3L3Q68CJ9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CREB3L3Q68CJ9 MIR449A-201ENST00000362113 91 ntBASIC2.6□□□□□ -1.99
CREB3L3Q68CJ9 Y_RNA.7-201ENST00000362352 102 ntBASIC2.6□□□□□ -1.99
CREB3L3Q68CJ9 RNA5SP493-201ENST00000364115 91 ntBASIC2.6□□□□□ -1.99
CREB3L3Q68CJ9 Y_RNA.233-201ENST00000364407 101 ntBASIC2.6□□□□□ -1.99
CREB3L3Q68CJ9 SNORA72-201ENST00000384339 132 ntBASIC2.6□□□□□ -1.99
CREB3L3Q68CJ9 SNORA36B-201ENST00000410438 131 ntBASIC2.6□□□□□ -1.99
CREB3L3Q68CJ9 COX6CP10-201ENST00000416832 224 ntBASIC2.6□□□□□ -1.99
CREB3L3Q68CJ9 AC011753.1-201ENST00000451001 220 ntBASIC2.6□□□□□ -1.99
CREB3L3Q68CJ9 HMGB3P3-201ENST00000510526 400 ntBASIC2.6□□□□□ -1.99
CREB3L3Q68CJ9 RNA5SP200-201ENST00000516360 103 ntBASIC2.6□□□□□ -1.99
CREB3L3Q68CJ9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.6□□□□□ -1.99
CREB3L3Q68CJ9 MIR5002-201ENST00000584713 97 ntBASIC2.6□□□□□ -1.99
CREB3L3Q68CJ9 AC005786.1-201ENST00000588553 154 ntBASIC2.6□□□□□ -1.99
CREB3L3Q68CJ9 MIRLET7G-201ENST00000362280 84 ntBASIC2.59□□□□□ -1.99
CREB3L3Q68CJ9 RNU1-58P-201ENST00000362413 163 ntBASIC2.59□□□□□ -1.99
CREB3L3Q68CJ9 RNU1-96P-201ENST00000364163 162 ntBASIC2.59□□□□□ -1.99
CREB3L3Q68CJ9 U8.7-201ENST00000364940 136 ntBASIC2.59□□□□□ -1.99
CREB3L3Q68CJ9 MIR144-201ENST00000384886 86 ntBASIC2.59□□□□□ -1.99
CREB3L3Q68CJ9 AL512604.1-201ENST00000404812 257 ntBASIC2.59□□□□□ -1.99
CREB3L3Q68CJ9 MIR548I3-201ENST00000408378 149 ntBASIC2.59□□□□□ -1.99
CREB3L3Q68CJ9 MIR548I1-201ENST00000408810 149 ntBASIC2.59□□□□□ -1.99
CREB3L3Q68CJ9 EBAG9P1-201ENST00000418955 543 ntBASIC2.59□□□□□ -1.99
CREB3L3Q68CJ9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.59□□□□□ -1.99
CREB3L3Q68CJ9 Y_RNA.662-201ENST00000516028 97 ntBASIC2.59□□□□□ -1.99
CREB3L3Q68CJ9 RNU6-63P-201ENST00000516690 95 ntBASIC2.59□□□□□ -1.99
CREB3L3Q68CJ9 AC015720.1-201ENST00000565251 277 ntBASIC2.59□□□□□ -1.99
CREB3L3Q68CJ9 MIR2681-201ENST00000581814 105 ntBASIC2.59□□□□□ -1.99
CREB3L3Q68CJ9 AC073413.2-201ENST00000604332 360 ntBASIC2.59□□□□□ -1.99
CREB3L3Q68CJ9 MIR203B-201ENST00000636080 86 ntBASIC2.59□□□□□ -1.99
CREB3L3Q68CJ9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.59□□□□□ -1.99
CREB3L3Q68CJ9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CREB3L3Q68CJ9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CREB3L3Q68CJ9 SNORD114-6-201ENST00000364393 72 ntBASIC2.58□□□□□ -2
CREB3L3Q68CJ9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.58□□□□□ -2
CREB3L3Q68CJ9 RNU6-918P-201ENST00000391219 106 ntBASIC2.58□□□□□ -2
CREB3L3Q68CJ9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.58□□□□□ -2
CREB3L3Q68CJ9 RNA5SP511-201ENST00000410487 115 ntBASIC2.58□□□□□ -2
CREB3L3Q68CJ9 AC007064.1-201ENST00000412238 351 ntBASIC2.58□□□□□ -2
CREB3L3Q68CJ9 RNU6-437P-201ENST00000459408 95 ntBASIC2.58□□□□□ -2
CREB3L3Q68CJ9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.58□□□□□ -2
CREB3L3Q68CJ9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.58□□□□□ -2
CREB3L3Q68CJ9 SCARNA16.3-201ENST00000516595 184 ntBASIC2.58□□□□□ -2
CREB3L3Q68CJ9 MIR4658-201ENST00000584344 65 ntBASIC2.58□□□□□ -2
CREB3L3Q68CJ9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.58□□□□□ -2
CREB3L3Q68CJ9 MIR6895-201ENST00000613497 78 ntBASIC2.58□□□□□ -2
CREB3L3Q68CJ9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.58□□□□□ -2
CREB3L3Q68CJ9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
CREB3L3Q68CJ9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CREB3L3Q68CJ9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.57□□□□□ -2
CREB3L3Q68CJ9 Y_RNA.172-201ENST00000363765 102 ntBASIC2.57□□□□□ -2
CREB3L3Q68CJ9 Y_RNA.180-201ENST00000363867 113 ntBASIC2.57□□□□□ -2
CREB3L3Q68CJ9 RNU6-1164P-201ENST00000364428 107 ntBASIC2.57□□□□□ -2
CREB3L3Q68CJ9 Y_RNA.571-201ENST00000384753 98 ntBASIC2.57□□□□□ -2
CREB3L3Q68CJ9 MIR626-201ENST00000385032 94 ntBASIC2.57□□□□□ -2
CREB3L3Q68CJ9 RNA5SP465-201ENST00000391195 109 ntBASIC2.57□□□□□ -2
CREB3L3Q68CJ9 RNA5SP270-201ENST00000411361 118 ntBASIC2.57□□□□□ -2
CREB3L3Q68CJ9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.57□□□□□ -2
CREB3L3Q68CJ9 AC023449.1-201ENST00000454464 154 ntBASIC2.57□□□□□ -2
CREB3L3Q68CJ9 AC107393.1-201ENST00000512403 346 ntBASIC2.57□□□□□ -2
CREB3L3Q68CJ9 RNY3P16-201ENST00000516338 101 ntBASIC2.57□□□□□ -2
CREB3L3Q68CJ9 MIR3169-201ENST00000578032 83 ntBASIC2.57□□□□□ -2
CREB3L3Q68CJ9 U6.106-201ENST00000636360 105 ntBASIC2.57□□□□□ -2
CREB3L3Q68CJ9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CREB3L3Q68CJ9 Y_RNA.238-201ENST00000364441 102 ntBASIC2.56□□□□□ -2
CREB3L3Q68CJ9 RNU6-47P-201ENST00000383866 107 ntBASIC2.56□□□□□ -2
CREB3L3Q68CJ9 SNORA8-201ENST00000384574 139 ntBASIC2.56□□□□□ -2
CREB3L3Q68CJ9 SNORA48.3-201ENST00000391081 134 ntBASIC2.56□□□□□ -2
CREB3L3Q68CJ9 AC069257.2-201ENST00000441819 155 ntBASIC2.56□□□□□ -2
CREB3L3Q68CJ9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.56□□□□□ -2
CREB3L3Q68CJ9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.56□□□□□ -2
CREB3L3Q68CJ9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.56□□□□□ -2
CREB3L3Q68CJ9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms