Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC007012.1-201ENST00000567192 175 ntBASIC3.68□□□□□ -1.82
RNF20Q5VTR2 MIR7112-201ENST00000616126 65 ntBASIC3.68□□□□□ -1.82
RNF20Q5VTR2 AC106754.2-201ENST00000623006 233 ntBASIC3.68□□□□□ -1.82
RNF20Q5VTR2 MIR7157-201ENST00000635801 60 ntBASIC3.68□□□□□ -1.82
RNF20Q5VTR2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF20Q5VTR2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF20Q5VTR2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF20Q5VTR2 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF20Q5VTR2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF20Q5VTR2 AC011406.1-201ENST00000512440 370 ntBASIC3.67□□□□□ -1.82
RNF20Q5VTR2 RNU7-99P-201ENST00000516271 62 ntBASIC3.67□□□□□ -1.82
RNF20Q5VTR2 RNU6-1146P-201ENST00000516282 102 ntBASIC3.67□□□□□ -1.82
RNF20Q5VTR2 UBL5P2-201ENST00000583788 219 ntBASIC3.67□□□□□ -1.82
RNF20Q5VTR2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF20Q5VTR2 AC007229.1-201ENST00000590455 412 ntBASIC3.67□□□□□ -1.82
RNF20Q5VTR2 RNU6-888P-201ENST00000363010 101 ntBASIC3.66□□□□□ -1.82
RNF20Q5VTR2 Y_RNA.281-201ENST00000364774 94 ntBASIC3.66□□□□□ -1.82
RNF20Q5VTR2 Y_RNA.366-201ENST00000365540 102 ntBASIC3.66□□□□□ -1.82
RNF20Q5VTR2 Y_RNA.549-201ENST00000384657 102 ntBASIC3.66□□□□□ -1.82
RNF20Q5VTR2 MIR23B-201ENST00000384832 97 ntBASIC3.66□□□□□ -1.82
RNF20Q5VTR2 MIR34B-201ENST00000385076 84 ntBASIC3.66□□□□□ -1.82
RNF20Q5VTR2 SNORD12C-201ENST00000386307 89 ntBASIC3.66□□□□□ -1.82
RNF20Q5VTR2 SNORD77.3-201ENST00000391113 65 ntBASIC3.66□□□□□ -1.82
RNF20Q5VTR2 RN7SL75P-201ENST00000461926 281 ntBASIC3.66□□□□□ -1.82
RNF20Q5VTR2 AC006483.1-201ENST00000487308 313 ntBASIC3.66□□□□□ -1.82
RNF20Q5VTR2 RNU6-1041P-201ENST00000516254 102 ntBASIC3.66□□□□□ -1.82
RNF20Q5VTR2 RNU7-128P-201ENST00000517247 62 ntBASIC3.66□□□□□ -1.82
RNF20Q5VTR2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF20Q5VTR2 AC008507.4-201ENST00000585464 127 ntBASIC3.66□□□□□ -1.82
RNF20Q5VTR2 AL137067.1-201ENST00000615933 120 ntBASIC3.66□□□□□ -1.82
RNF20Q5VTR2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RNF20Q5VTR2 MIR126-201ENST00000362291 85 ntBASIC3.65□□□□□ -1.83
RNF20Q5VTR2 SNORA63.1-201ENST00000362493 131 ntBASIC3.65□□□□□ -1.83
RNF20Q5VTR2 snoU2-30.2-201ENST00000362805 70 ntBASIC3.65□□□□□ -1.83
RNF20Q5VTR2 Y_RNA.369-201ENST00000365568 117 ntBASIC3.65□□□□□ -1.83
RNF20Q5VTR2 SNORD24-201ENST00000383884 75 ntBASIC3.65□□□□□ -1.83
RNF20Q5VTR2 RNVU1-14-201ENST00000384770 164 ntBASIC3.65□□□□□ -1.83
RNF20Q5VTR2 AL590004.2-201ENST00000404787 371 ntBASIC3.65□□□□□ -1.83
RNF20Q5VTR2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF20Q5VTR2 RN7SL20P-201ENST00000488827 297 ntBASIC3.65□□□□□ -1.83
RNF20Q5VTR2 SEM1P1-201ENST00000506694 209 ntBASIC3.65□□□□□ -1.83
RNF20Q5VTR2 SCGB1D5P-201ENST00000515134 247 ntBASIC3.65□□□□□ -1.83
RNF20Q5VTR2 RN7SKP43-201ENST00000516173 320 ntBASIC3.65□□□□□ -1.83
RNF20Q5VTR2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF20Q5VTR2 MIR5004-201ENST00000579078 107 ntBASIC3.65□□□□□ -1.83
RNF20Q5VTR2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
RNF20Q5VTR2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.65□□□□□ -1.83
RNF20Q5VTR2 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF20Q5VTR2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF20Q5VTR2 AC093010.3-201ENST00000570269 15214 ntBASIC3.64□□□□□ -1.83
RNF20Q5VTR2 MIR548A2-201ENST00000384956 97 ntBASIC3.64□□□□□ -1.83
RNF20Q5VTR2 SNORD67-201ENST00000390833 111 ntBASIC3.64□□□□□ -1.83
RNF20Q5VTR2 RNA5SP344-201ENST00000411081 104 ntBASIC3.64□□□□□ -1.83
RNF20Q5VTR2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF20Q5VTR2 CYP2C59P-201ENST00000457790 269 ntBASIC3.64□□□□□ -1.83
RNF20Q5VTR2 MIR92B-201ENST00000607575 96 ntBASIC3.64□□□□□ -1.83
RNF20Q5VTR2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF20Q5VTR2 MIR6079-201ENST00000635807 62 ntBASIC3.64□□□□□ -1.83
RNF20Q5VTR2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF20Q5VTR2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNF20Q5VTR2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF20Q5VTR2 MIR570-201ENST00000384917 97 ntBASIC3.63□□□□□ -1.83
RNF20Q5VTR2 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.63□□□□□ -1.83
RNF20Q5VTR2 RNU2-48P-201ENST00000410694 191 ntBASIC3.63□□□□□ -1.83
RNF20Q5VTR2 RNA5SP136-201ENST00000410906 107 ntBASIC3.63□□□□□ -1.83
RNF20Q5VTR2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF20Q5VTR2 SNRPGP13-201ENST00000442212 177 ntBASIC3.63□□□□□ -1.83
RNF20Q5VTR2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.63□□□□□ -1.83
RNF20Q5VTR2 RPS29P12-201ENST00000460178 152 ntBASIC3.63□□□□□ -1.83
RNF20Q5VTR2 RN7SL633P-201ENST00000488974 297 ntBASIC3.63□□□□□ -1.83
RNF20Q5VTR2 SCARNA15-202ENST00000516881 127 ntBASIC3.63□□□□□ -1.83
RNF20Q5VTR2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF20Q5VTR2 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.63□□□□□ -1.83
RNF20Q5VTR2 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
RNF20Q5VTR2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.63□□□□□ -1.83
RNF20Q5VTR2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.63□□□□□ -1.83
RNF20Q5VTR2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RNF20Q5VTR2 Y_RNA.85-201ENST00000363014 111 ntBASIC3.62□□□□□ -1.83
RNF20Q5VTR2 EDDM3CP-201ENST00000415977 425 ntBASIC3.62□□□□□ -1.83
RNF20Q5VTR2 AC023141.11-201ENST00000508864 202 ntBASIC3.62□□□□□ -1.83
RNF20Q5VTR2 RNU6-113P-201ENST00000516653 101 ntBASIC3.62□□□□□ -1.83
RNF20Q5VTR2 AL359075.3-201ENST00000613288 217 ntBASIC3.62□□□□□ -1.83
RNF20Q5VTR2 AL591926.4-201ENST00000616895 298 ntBASIC3.62□□□□□ -1.83
RNF20Q5VTR2 AC009831.4-201ENST00000620744 325 ntBASIC3.62□□□□□ -1.83
RNF20Q5VTR2 MIR376A2-201ENST00000636782 80 ntBASIC3.62□□□□□ -1.83
RNF20Q5VTR2 AC018630.2-201ENST00000534866 2403 ntBASIC3.62□□□□□ -1.83
RNF20Q5VTR2 ICE2P2-201ENST00000483823 2787 ntBASIC3.62□□□□□ -1.83
RNF20Q5VTR2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RNF20Q5VTR2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RNF20Q5VTR2 AC073325.2-201ENST00000339545 159 ntBASIC3.61□□□□□ -1.83
RNF20Q5VTR2 MIR22-201ENST00000362190 85 ntBASIC3.61□□□□□ -1.83
RNF20Q5VTR2 SNORA38.1-201ENST00000364172 131 ntBASIC3.61□□□□□ -1.83
RNF20Q5VTR2 SNORA68.1-201ENST00000364537 132 ntBASIC3.61□□□□□ -1.83
RNF20Q5VTR2 RNU6-756P-201ENST00000383997 107 ntBASIC3.61□□□□□ -1.83
RNF20Q5VTR2 MIR95-201ENST00000385072 81 ntBASIC3.61□□□□□ -1.83
RNF20Q5VTR2 RN7SKP284-201ENST00000411002 343 ntBASIC3.61□□□□□ -1.83
RNF20Q5VTR2 HMGN2P32-201ENST00000444648 269 ntBASIC3.61□□□□□ -1.83
RNF20Q5VTR2 RNU6-240P-201ENST00000516098 97 ntBASIC3.61□□□□□ -1.83
RNF20Q5VTR2 AL355297.2-201ENST00000604792 129 ntBASIC3.61□□□□□ -1.83
RNF20Q5VTR2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms