Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 Y_RNA.44-201ENST00000362676 108 ntBASIC2.11□□□□□ -2.07
RNF220Q5VTB9 RNA5SP160-201ENST00000364866 120 ntBASIC2.11□□□□□ -2.07
RNF220Q5VTB9 RNU6-702P-201ENST00000364982 107 ntBASIC2.11□□□□□ -2.07
RNF220Q5VTB9 SNORA72.4-201ENST00000384174 132 ntBASIC2.11□□□□□ -2.07
RNF220Q5VTB9 RN7SKP200-201ENST00000410564 320 ntBASIC2.11□□□□□ -2.07
RNF220Q5VTB9 COX6CP10-201ENST00000416832 224 ntBASIC2.11□□□□□ -2.07
RNF220Q5VTB9 snoU13.27-201ENST00000459278 104 ntBASIC2.11□□□□□ -2.07
RNF220Q5VTB9 Y_RNA.668-201ENST00000516233 93 ntBASIC2.11□□□□□ -2.07
RNF220Q5VTB9 RNU6-1291P-201ENST00000516591 104 ntBASIC2.11□□□□□ -2.07
RNF220Q5VTB9 AP002004.2-201ENST00000531656 154 ntBASIC2.11□□□□□ -2.07
RNF220Q5VTB9 MIR5002-201ENST00000584713 97 ntBASIC2.11□□□□□ -2.07
RNF220Q5VTB9 AL078604.3-201ENST00000615580 211 ntBASIC2.11□□□□□ -2.07
RNF220Q5VTB9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.11□□□□□ -2.07
RNF220Q5VTB9 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.11□□□□□ -2.07
RNF220Q5VTB9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RNF220Q5VTB9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
RNF220Q5VTB9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RNF220Q5VTB9 SNORA4.2-201ENST00000365313 147 ntBASIC2.1□□□□□ -2.07
RNF220Q5VTB9 FTH1P12-201ENST00000432137 551 ntBASIC2.1□□□□□ -2.07
RNF220Q5VTB9 RNU6-1132P-201ENST00000459214 107 ntBASIC2.1□□□□□ -2.07
RNF220Q5VTB9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.1□□□□□ -2.07
RNF220Q5VTB9 MRPS17P9-201ENST00000511924 393 ntBASIC2.1□□□□□ -2.07
RNF220Q5VTB9 RNU7-115P-201ENST00000516433 55 ntBASIC2.1□□□□□ -2.07
RNF220Q5VTB9 RNU1-40P-201ENST00000516816 164 ntBASIC2.1□□□□□ -2.07
RNF220Q5VTB9 RNU2-56P-201ENST00000516826 190 ntBASIC2.1□□□□□ -2.07
RNF220Q5VTB9 RNU1-97P-201ENST00000516872 164 ntBASIC2.1□□□□□ -2.07
RNF220Q5VTB9 AC011604.1-201ENST00000545978 196 ntBASIC2.1□□□□□ -2.07
RNF220Q5VTB9 MIR3935-201ENST00000583472 104 ntBASIC2.1□□□□□ -2.07
RNF220Q5VTB9 AC012433.1-201ENST00000588916 398 ntBASIC2.1□□□□□ -2.07
RNF220Q5VTB9 POLR3GP1-201ENST00000594073 261 ntBASIC2.1□□□□□ -2.07
RNF220Q5VTB9 AP003357.1-201ENST00000604497 148 ntBASIC2.1□□□□□ -2.07
RNF220Q5VTB9 AC046143.2-201ENST00000609789 160 ntBASIC2.1□□□□□ -2.07
RNF220Q5VTB9 AC100821.1-201ENST00000523153 2479 ntBASIC2.1□□□□□ -2.07
RNF220Q5VTB9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RNF220Q5VTB9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
RNF220Q5VTB9 Y_RNA.193-201ENST00000363979 102 ntBASIC2.09□□□□□ -2.07
RNF220Q5VTB9 U8.7-201ENST00000364940 136 ntBASIC2.09□□□□□ -2.07
RNF220Q5VTB9 RNU6-662P-201ENST00000384253 104 ntBASIC2.09□□□□□ -2.07
RNF220Q5VTB9 RNU6-574P-201ENST00000384265 107 ntBASIC2.09□□□□□ -2.07
RNF220Q5VTB9 SNORA72-201ENST00000384339 132 ntBASIC2.09□□□□□ -2.07
RNF220Q5VTB9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.09□□□□□ -2.07
RNF220Q5VTB9 AC104332.1-201ENST00000440471 797 ntBASIC2.09□□□□□ -2.07
RNF220Q5VTB9 U8.19-201ENST00000459095 133 ntBASIC2.09□□□□□ -2.07
RNF220Q5VTB9 AC025033.1-201ENST00000463883 194 ntBASIC2.09□□□□□ -2.07
RNF220Q5VTB9 AC117454.1-201ENST00000491120 168 ntBASIC2.09□□□□□ -2.07
RNF220Q5VTB9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.09□□□□□ -2.07
RNF220Q5VTB9 SNORA31.10-201ENST00000516482 106 ntBASIC2.09□□□□□ -2.07
RNF220Q5VTB9 MIR4709-201ENST00000577272 72 ntBASIC2.09□□□□□ -2.07
RNF220Q5VTB9 AL162424.1-201ENST00000602325 221 ntBASIC2.09□□□□□ -2.07
RNF220Q5VTB9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.09□□□□□ -2.07
RNF220Q5VTB9 AC062037.2-201ENST00000610137 73 ntBASIC2.09□□□□□ -2.07
RNF220Q5VTB9 U2.14-201ENST00000615943 113 ntBASIC2.09□□□□□ -2.07
RNF220Q5VTB9 MIR6852-201ENST00000621699 66 ntBASIC2.09□□□□□ -2.07
RNF220Q5VTB9 RNU6-661P-201ENST00000362409 107 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 Y_RNA.14-201ENST00000362415 103 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 RNU6-899P-201ENST00000363947 107 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 Y_RNA.217-201ENST00000364214 105 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 Y_RNA.275-201ENST00000364726 110 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RNF220Q5VTB9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RNF220Q5VTB9 RNU6-763P-201ENST00000390865 106 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 SNORA26.5-201ENST00000391215 123 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 RNU2-38P-201ENST00000410856 79 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 Y_RNA.621-201ENST00000411065 96 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.08□□□□□ -2.08
RNF220Q5VTB9 RNU7-141P-201ENST00000459304 62 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 Y_RNA.641-201ENST00000459414 105 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 RPL39P38-201ENST00000467018 153 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 RNU7-28P-201ENST00000516759 62 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 AC024405.2-202ENST00000532731 184 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 AC091544.4-201ENST00000555268 342 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 AC004817.2-201ENST00000561794 651 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 AL929325.1-201ENST00000603096 117 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 SNORA28-201ENST00000606769 126 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 MIR548AY-201ENST00000617669 107 ntBASIC2.08□□□□□ -2.08
RNF220Q5VTB9 SNORA1B-201ENST00000362535 133 ntBASIC2.07□□□□□ -2.08
RNF220Q5VTB9 RNU6-1272P-201ENST00000362776 107 ntBASIC2.07□□□□□ -2.08
RNF220Q5VTB9 RNU6-1048P-201ENST00000364054 107 ntBASIC2.07□□□□□ -2.08
RNF220Q5VTB9 Y_RNA.352-201ENST00000365439 102 ntBASIC2.07□□□□□ -2.08
RNF220Q5VTB9 Y_RNA.500-201ENST00000384466 111 ntBASIC2.07□□□□□ -2.08
RNF220Q5VTB9 RNU2-14P-201ENST00000411053 191 ntBASIC2.07□□□□□ -2.08
RNF220Q5VTB9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.07□□□□□ -2.08
RNF220Q5VTB9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.07□□□□□ -2.08
RNF220Q5VTB9 RNU7-34P-201ENST00000459394 64 ntBASIC2.07□□□□□ -2.08
RNF220Q5VTB9 Y_RNA.637-201ENST00000459424 114 ntBASIC2.07□□□□□ -2.08
RNF220Q5VTB9 AL049830.1-201ENST00000468034 425 ntBASIC2.07□□□□□ -2.08
RNF220Q5VTB9 SCARNA16.3-201ENST00000516595 184 ntBASIC2.07□□□□□ -2.08
RNF220Q5VTB9 AL096840.1-201ENST00000603287 93 ntBASIC2.07□□□□□ -2.08
RNF220Q5VTB9 AC009831.4-201ENST00000620744 325 ntBASIC2.07□□□□□ -2.08
RNF220Q5VTB9 AL136360.1-201ENST00000503377 1900 ntBASIC2.07□□□□□ -2.08
RNF220Q5VTB9 ZNF658B-202ENST00000615961 3375 ntBASIC2.07□□□□□ -2.08
RNF220Q5VTB9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
RNF220Q5VTB9 AC134026.1-201ENST00000623249 2239 ntBASIC2.06□□□□□ -2.08
RNF220Q5VTB9 RNU6-414P-201ENST00000363705 104 ntBASIC2.06□□□□□ -2.08
RNF220Q5VTB9 Y_RNA.265-201ENST00000364677 108 ntBASIC2.06□□□□□ -2.08
RNF220Q5VTB9 Y_RNA.562-201ENST00000384695 113 ntBASIC2.06□□□□□ -2.08
RNF220Q5VTB9 MTCO2P33-201ENST00000402100 465 ntBASIC2.06□□□□□ -2.08
RNF220Q5VTB9 AL034345.1-201ENST00000407768 123 ntBASIC2.06□□□□□ -2.08
RNF220Q5VTB9 SNORA11.2-201ENST00000408318 127 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms