Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.19□□□□□ -1.74
VARS2Q5ST30 MIR3152-201ENST00000579801 74 ntBASIC4.19□□□□□ -1.74
VARS2Q5ST30 MIR5195-201ENST00000583555 115 ntBASIC4.19□□□□□ -1.74
VARS2Q5ST30 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VARS2Q5ST30 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
VARS2Q5ST30 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.19□□□□□ -1.74
VARS2Q5ST30 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VARS2Q5ST30 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.18□□□□□ -1.74
VARS2Q5ST30 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VARS2Q5ST30 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VARS2Q5ST30 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.18□□□□□ -1.74
VARS2Q5ST30 SNORD74.4-201ENST00000364129 80 ntBASIC4.18□□□□□ -1.74
VARS2Q5ST30 MIR206-201ENST00000384872 86 ntBASIC4.18□□□□□ -1.74
VARS2Q5ST30 RNA5SP104-201ENST00000410989 118 ntBASIC4.18□□□□□ -1.74
VARS2Q5ST30 AC004552.1-201ENST00000419089 348 ntBASIC4.18□□□□□ -1.74
VARS2Q5ST30 AC244505.4-201ENST00000434905 287 ntBASIC4.18□□□□□ -1.74
VARS2Q5ST30 SSXP5-201ENST00000443473 287 ntBASIC4.18□□□□□ -1.74
VARS2Q5ST30 U3.44-201ENST00000458938 192 ntBASIC4.18□□□□□ -1.74
VARS2Q5ST30 RPS26P3-201ENST00000470205 348 ntBASIC4.18□□□□□ -1.74
VARS2Q5ST30 AC090543.2-201ENST00000483963 348 ntBASIC4.18□□□□□ -1.74
VARS2Q5ST30 AC004057.1-201ENST00000485827 348 ntBASIC4.18□□□□□ -1.74
VARS2Q5ST30 RNU1-95P-201ENST00000516357 160 ntBASIC4.18□□□□□ -1.74
VARS2Q5ST30 RNU1-128P-201ENST00000516704 160 ntBASIC4.18□□□□□ -1.74
VARS2Q5ST30 AC087499.8-201ENST00000578406 226 ntBASIC4.18□□□□□ -1.74
VARS2Q5ST30 uc_338.32-201ENST00000615087 172 ntBASIC4.18□□□□□ -1.74
VARS2Q5ST30 U6.108-201ENST00000637764 58 ntBASIC4.18□□□□□ -1.74
VARS2Q5ST30 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VARS2Q5ST30 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VARS2Q5ST30 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
VARS2Q5ST30 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VARS2Q5ST30 snoU2-30.2-201ENST00000362805 70 ntBASIC4.17□□□□□ -1.74
VARS2Q5ST30 SNORA3.3-201ENST00000408712 125 ntBASIC4.17□□□□□ -1.74
VARS2Q5ST30 SNORA3C-201ENST00000408792 125 ntBASIC4.17□□□□□ -1.74
VARS2Q5ST30 RNU6-1190P-201ENST00000410811 104 ntBASIC4.17□□□□□ -1.74
VARS2Q5ST30 AC025445.1-201ENST00000502728 300 ntBASIC4.17□□□□□ -1.74
VARS2Q5ST30 RNU6-807P-201ENST00000516805 107 ntBASIC4.17□□□□□ -1.74
VARS2Q5ST30 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.17□□□□□ -1.74
VARS2Q5ST30 MIR4484-201ENST00000582855 83 ntBASIC4.17□□□□□ -1.74
VARS2Q5ST30 MIR1297-201ENST00000637311 77 ntBASIC4.17□□□□□ -1.74
VARS2Q5ST30 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.17□□□□□ -1.74
VARS2Q5ST30 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VARS2Q5ST30 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.17□□□□□ -1.74
VARS2Q5ST30 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
VARS2Q5ST30 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
VARS2Q5ST30 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
VARS2Q5ST30 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VARS2Q5ST30 PWAR6-201ENST00000552334 4618 ntBASIC4.16□□□□□ -1.74
VARS2Q5ST30 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
VARS2Q5ST30 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.16□□□□□ -1.74
VARS2Q5ST30 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.16□□□□□ -1.74
VARS2Q5ST30 RNU6-161P-201ENST00000363051 106 ntBASIC4.16□□□□□ -1.74
VARS2Q5ST30 MIR218-2-201ENST00000385006 110 ntBASIC4.16□□□□□ -1.74
VARS2Q5ST30 AC083863.1-201ENST00000438811 231 ntBASIC4.16□□□□□ -1.74
VARS2Q5ST30 SPINT5P-201ENST00000448174 155 ntBASIC4.16□□□□□ -1.74
VARS2Q5ST30 AC078918.1-201ENST00000498515 228 ntBASIC4.16□□□□□ -1.74
VARS2Q5ST30 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
VARS2Q5ST30 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
VARS2Q5ST30 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
VARS2Q5ST30 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.16□□□□□ -1.74
VARS2Q5ST30 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
VARS2Q5ST30 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VARS2Q5ST30 SNORA5A-201ENST00000384111 134 ntBASIC4.15□□□□□ -1.75
VARS2Q5ST30 RNU6-480P-201ENST00000384332 107 ntBASIC4.15□□□□□ -1.75
VARS2Q5ST30 MIR607-201ENST00000385241 96 ntBASIC4.15□□□□□ -1.75
VARS2Q5ST30 RNA5SP467-201ENST00000391274 118 ntBASIC4.15□□□□□ -1.75
VARS2Q5ST30 SNORD4B-201ENST00000459083 72 ntBASIC4.15□□□□□ -1.75
VARS2Q5ST30 RNU7-23P-201ENST00000459465 62 ntBASIC4.15□□□□□ -1.75
VARS2Q5ST30 AP002884.2-201ENST00000471647 395 ntBASIC4.15□□□□□ -1.75
VARS2Q5ST30 FGF7P7-201ENST00000514120 227 ntBASIC4.15□□□□□ -1.75
VARS2Q5ST30 RNU6-826P-201ENST00000516827 104 ntBASIC4.15□□□□□ -1.75
VARS2Q5ST30 SCARNA14-201ENST00000516903 136 ntBASIC4.15□□□□□ -1.75
VARS2Q5ST30 MIR1248-201ENST00000629190 106 ntBASIC4.15□□□□□ -1.75
VARS2Q5ST30 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
VARS2Q5ST30 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
VARS2Q5ST30 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.15□□□□□ -1.75
VARS2Q5ST30 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
VARS2Q5ST30 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
VARS2Q5ST30 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.15□□□□□ -1.75
VARS2Q5ST30 USP8P1-201ENST00000494673 3183 ntBASIC4.14□□□□□ -1.75
VARS2Q5ST30 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VARS2Q5ST30 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VARS2Q5ST30 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.14□□□□□ -1.75
VARS2Q5ST30 RNU6-614P-201ENST00000384369 107 ntBASIC4.14□□□□□ -1.75
VARS2Q5ST30 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VARS2Q5ST30 RNU6-663P-201ENST00000391105 106 ntBASIC4.14□□□□□ -1.75
VARS2Q5ST30 RNA5SP129-201ENST00000410276 118 ntBASIC4.14□□□□□ -1.75
VARS2Q5ST30 AC025554.1-201ENST00000505641 188 ntBASIC4.14□□□□□ -1.75
VARS2Q5ST30 RNU6-1108P-201ENST00000516308 104 ntBASIC4.14□□□□□ -1.75
VARS2Q5ST30 FAM106DP-201ENST00000586416 501 ntBASIC4.14□□□□□ -1.75
VARS2Q5ST30 AC005000.2-201ENST00000605468 310 ntBASIC4.14□□□□□ -1.75
VARS2Q5ST30 U6.59-201ENST00000615686 107 ntBASIC4.14□□□□□ -1.75
VARS2Q5ST30 SCARNA15.3-201ENST00000626315 122 ntBASIC4.14□□□□□ -1.75
VARS2Q5ST30 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.14□□□□□ -1.75
VARS2Q5ST30 SCARNA4.1-201ENST00000628597 123 ntBASIC4.14□□□□□ -1.75
VARS2Q5ST30 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.14□□□□□ -1.75
VARS2Q5ST30 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.14□□□□□ -1.75
VARS2Q5ST30 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VARS2Q5ST30 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.13□□□□□ -1.75
VARS2Q5ST30 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VARS2Q5ST30 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms