Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 Y_RNA.24-201ENST00000362508 103 ntBASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 RNU6-682P-201ENST00000363843 106 ntBASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 SNORD114-6-201ENST00000364393 72 ntBASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 RNU6-376P-201ENST00000384731 106 ntBASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 RNA5SP511-201ENST00000410487 115 ntBASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 RN7SKP223-201ENST00000410582 62 ntBASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 SRIP3-201ENST00000413200 219 ntBASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 HSPE1P13-201ENST00000451143 297 ntBASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 RN7SL429P-201ENST00000479090 223 ntBASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 RN7SL489P-201ENST00000486185 223 ntBASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 RN7SL327P-201ENST00000488659 223 ntBASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 AC011406.1-201ENST00000512440 370 ntBASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 AC100767.1-201ENST00000528178 123 ntBASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 MIR4658-201ENST00000584344 65 ntBASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 RN7SL853P-201ENST00000617250 223 ntBASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 MIR548AY-201ENST00000617669 107 ntBASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 U4atac.1-201ENST00000618345 95 ntBASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC178Q5BJE1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CCDC178Q5BJE1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC178Q5BJE1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.58□□□□□ -2
CCDC178Q5BJE1 RNU1-52P-201ENST00000384190 164 ntBASIC2.58□□□□□ -2
CCDC178Q5BJE1 SNORA70B-201ENST00000384210 135 ntBASIC2.58□□□□□ -2
CCDC178Q5BJE1 RNU4-70P-201ENST00000384579 139 ntBASIC2.58□□□□□ -2
CCDC178Q5BJE1 Y_RNA.572-201ENST00000384757 98 ntBASIC2.58□□□□□ -2
CCDC178Q5BJE1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.58□□□□□ -2
CCDC178Q5BJE1 RPS29P21-201ENST00000496272 170 ntBASIC2.58□□□□□ -2
CCDC178Q5BJE1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.58□□□□□ -2
CCDC178Q5BJE1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.58□□□□□ -2
CCDC178Q5BJE1 RNU7-172P-201ENST00000517125 64 ntBASIC2.58□□□□□ -2
CCDC178Q5BJE1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.58□□□□□ -2
CCDC178Q5BJE1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.58□□□□□ -2
CCDC178Q5BJE1 AL137100.2-201ENST00000555786 315 ntBASIC2.58□□□□□ -2
CCDC178Q5BJE1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.58□□□□□ -2
CCDC178Q5BJE1 POLR3GP1-201ENST00000594073 261 ntBASIC2.58□□□□□ -2
CCDC178Q5BJE1 Y_RNA.802-201ENST00000614892 130 ntBASIC2.58□□□□□ -2
CCDC178Q5BJE1 CENPCP1-201ENST00000533085 2578 ntBASIC2.58□□□□□ -2
CCDC178Q5BJE1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC178Q5BJE1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.58□□□□□ -2
CCDC178Q5BJE1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC178Q5BJE1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC178Q5BJE1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.57□□□□□ -2
CCDC178Q5BJE1 MIR367-201ENST00000362299 68 ntBASIC2.57□□□□□ -2
CCDC178Q5BJE1 SNORD114-7-201ENST00000362520 77 ntBASIC2.57□□□□□ -2
CCDC178Q5BJE1 Y_RNA.99-201ENST00000363138 105 ntBASIC2.57□□□□□ -2
CCDC178Q5BJE1 RNU6-160P-201ENST00000384591 107 ntBASIC2.57□□□□□ -2
CCDC178Q5BJE1 SNORA8.3-201ENST00000384679 139 ntBASIC2.57□□□□□ -2
CCDC178Q5BJE1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.57□□□□□ -2
CCDC178Q5BJE1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.57□□□□□ -2
CCDC178Q5BJE1 TRBV12-1-201ENST00000479785 344 ntBASIC2.57□□□□□ -2
CCDC178Q5BJE1 RPL23AP54-201ENST00000495129 419 ntBASIC2.57□□□□□ -2
CCDC178Q5BJE1 AC097462.1-201ENST00000514125 324 ntBASIC2.57□□□□□ -2
CCDC178Q5BJE1 Y_RNA.662-201ENST00000516028 97 ntBASIC2.57□□□□□ -2
CCDC178Q5BJE1 RNU6-1278P-201ENST00000516130 107 ntBASIC2.57□□□□□ -2
CCDC178Q5BJE1 RNU6-1219P-201ENST00000516143 112 ntBASIC2.57□□□□□ -2
CCDC178Q5BJE1 MIR3126-201ENST00000577443 74 ntBASIC2.57□□□□□ -2
CCDC178Q5BJE1 AC005972.2-201ENST00000604690 348 ntBASIC2.57□□□□□ -2
CCDC178Q5BJE1 U2.20-201ENST00000613956 192 ntBASIC2.57□□□□□ -2
CCDC178Q5BJE1 AC006435.5-201ENST00000624486 112 ntBASIC2.57□□□□□ -2
CCDC178Q5BJE1 MIRLET7G-201ENST00000362280 84 ntBASIC2.56□□□□□ -2
CCDC178Q5BJE1 RNU6-969P-201ENST00000383900 105 ntBASIC2.56□□□□□ -2
CCDC178Q5BJE1 Y_RNA.571-201ENST00000384753 98 ntBASIC2.56□□□□□ -2
CCDC178Q5BJE1 AL355497.1-201ENST00000406262 551 ntBASIC2.56□□□□□ -2
CCDC178Q5BJE1 SNORA36B-201ENST00000410438 131 ntBASIC2.56□□□□□ -2
CCDC178Q5BJE1 RNU6-383P-201ENST00000410864 94 ntBASIC2.56□□□□□ -2
CCDC178Q5BJE1 MTND2P29-201ENST00000438595 412 ntBASIC2.56□□□□□ -2
CCDC178Q5BJE1 SUMO1P3-201ENST00000439961 304 ntBASIC2.56□□□□□ -2
CCDC178Q5BJE1 AC079804.2-201ENST00000490376 200 ntBASIC2.56□□□□□ -2
CCDC178Q5BJE1 RNU6-1146P-201ENST00000516282 102 ntBASIC2.56□□□□□ -2
CCDC178Q5BJE1 RNU7-115P-201ENST00000516433 55 ntBASIC2.56□□□□□ -2
CCDC178Q5BJE1 AC026271.5-201ENST00000577873 130 ntBASIC2.56□□□□□ -2
CCDC178Q5BJE1 AC245884.12-201ENST00000615364 59 ntBASIC2.56□□□□□ -2
CCDC178Q5BJE1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC178Q5BJE1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.56□□□□□ -2
CCDC178Q5BJE1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC178Q5BJE1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC178Q5BJE1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC178Q5BJE1 Y_RNA.7-201ENST00000362352 102 ntBASIC2.55□□□□□ -2
CCDC178Q5BJE1 snoU2-30.2-201ENST00000362805 70 ntBASIC2.55□□□□□ -2
CCDC178Q5BJE1 RNU1-22P-201ENST00000363334 158 ntBASIC2.55□□□□□ -2
CCDC178Q5BJE1 Y_RNA.180-201ENST00000363867 113 ntBASIC2.55□□□□□ -2
CCDC178Q5BJE1 Y_RNA.182-201ENST00000363880 111 ntBASIC2.55□□□□□ -2
CCDC178Q5BJE1 RNU6-1062P-201ENST00000383908 107 ntBASIC2.55□□□□□ -2
CCDC178Q5BJE1 PCNPP3-201ENST00000393579 471 ntBASIC2.55□□□□□ -2
CCDC178Q5BJE1 SNORA11.4-201ENST00000408823 129 ntBASIC2.55□□□□□ -2
CCDC178Q5BJE1 EDDM3CP-201ENST00000415977 425 ntBASIC2.55□□□□□ -2
CCDC178Q5BJE1 AC010154.1-201ENST00000425857 269 ntBASIC2.55□□□□□ -2
CCDC178Q5BJE1 YWHAEP4-201ENST00000505390 198 ntBASIC2.55□□□□□ -2
CCDC178Q5BJE1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.55□□□□□ -2
CCDC178Q5BJE1 AC015720.1-201ENST00000565251 277 ntBASIC2.55□□□□□ -2
CCDC178Q5BJE1 MIR3945-201ENST00000581853 98 ntBASIC2.55□□□□□ -2
CCDC178Q5BJE1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.55□□□□□ -2
CCDC178Q5BJE1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC178Q5BJE1 U8.2-201ENST00000363156 134 ntBASIC2.54□□□□□ -2
CCDC178Q5BJE1 RNU6-23P-201ENST00000363283 107 ntBASIC2.54□□□□□ -2
CCDC178Q5BJE1 Y_RNA.238-201ENST00000364441 102 ntBASIC2.54□□□□□ -2
CCDC178Q5BJE1 RNA5SP323-201ENST00000391094 133 ntBASIC2.54□□□□□ -2
CCDC178Q5BJE1 RNA5SP467-201ENST00000391274 118 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms