Protein–RNA interactions for Protein: Q504U0

C4orf46, Renal cancer differentiation gene 1 protein, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46Q504U0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
C4orf46Q504U0 snoU2-30.2-201ENST00000362805 70 ntBASIC2.19□□□□□ -2.06
C4orf46Q504U0 Y_RNA.456-201ENST00000384232 111 ntBASIC2.19□□□□□ -2.06
C4orf46Q504U0 Y_RNA.785-201ENST00000384290 109 ntBASIC2.19□□□□□ -2.06
C4orf46Q504U0 MIR548I3-201ENST00000408378 149 ntBASIC2.19□□□□□ -2.06
C4orf46Q504U0 MIR1267-201ENST00000408723 78 ntBASIC2.19□□□□□ -2.06
C4orf46Q504U0 MIR548I1-201ENST00000408810 149 ntBASIC2.19□□□□□ -2.06
C4orf46Q504U0 RNU6-453P-201ENST00000516819 85 ntBASIC2.19□□□□□ -2.06
C4orf46Q504U0 RNU7-172P-201ENST00000517125 64 ntBASIC2.19□□□□□ -2.06
C4orf46Q504U0 AC021269.2-201ENST00000532318 330 ntBASIC2.19□□□□□ -2.06
C4orf46Q504U0 POLR3GP1-201ENST00000594073 261 ntBASIC2.19□□□□□ -2.06
C4orf46Q504U0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.19□□□□□ -2.06
C4orf46Q504U0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.19□□□□□ -2.06
C4orf46Q504U0 FTX_2.1-201ENST00000618816 94 ntBASIC2.19□□□□□ -2.06
C4orf46Q504U0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.19□□□□□ -2.06
C4orf46Q504U0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.19□□□□□ -2.06
C4orf46Q504U0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
C4orf46Q504U0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
C4orf46Q504U0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
C4orf46Q504U0 RNU1-22P-201ENST00000363334 158 ntBASIC2.18□□□□□ -2.06
C4orf46Q504U0 RNU6-1205P-201ENST00000363625 106 ntBASIC2.18□□□□□ -2.06
C4orf46Q504U0 RNU6-682P-201ENST00000363843 106 ntBASIC2.18□□□□□ -2.06
C4orf46Q504U0 RNU4-13P-201ENST00000364019 141 ntBASIC2.18□□□□□ -2.06
C4orf46Q504U0 snoU2_19.4-201ENST00000364329 80 ntBASIC2.18□□□□□ -2.06
C4orf46Q504U0 RNU6-969P-201ENST00000383900 105 ntBASIC2.18□□□□□ -2.06
C4orf46Q504U0 RNU6-376P-201ENST00000384731 106 ntBASIC2.18□□□□□ -2.06
C4orf46Q504U0 HMGN2P23-201ENST00000456759 269 ntBASIC2.18□□□□□ -2.06
C4orf46Q504U0 RNU6-1219P-201ENST00000516143 112 ntBASIC2.18□□□□□ -2.06
C4orf46Q504U0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.18□□□□□ -2.06
C4orf46Q504U0 AC015720.1-201ENST00000565251 277 ntBASIC2.18□□□□□ -2.06
C4orf46Q504U0 MIR4444-1-201ENST00000581696 74 ntBASIC2.18□□□□□ -2.06
C4orf46Q504U0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.18□□□□□ -2.06
C4orf46Q504U0 MIR4444-2-201ENST00000584390 74 ntBASIC2.18□□□□□ -2.06
C4orf46Q504U0 AC073413.2-201ENST00000604332 360 ntBASIC2.18□□□□□ -2.06
C4orf46Q504U0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.18□□□□□ -2.06
C4orf46Q504U0 AC098479.1-201ENST00000609225 154 ntBASIC2.18□□□□□ -2.06
C4orf46Q504U0 AC104465.1-201ENST00000611365 139 ntBASIC2.18□□□□□ -2.06
C4orf46Q504U0 AC012314.7-201ENST00000619693 93 ntBASIC2.18□□□□□ -2.06
C4orf46Q504U0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
C4orf46Q504U0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
C4orf46Q504U0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
C4orf46Q504U0 RNU6-774P-201ENST00000363238 107 ntBASIC2.17□□□□□ -2.06
C4orf46Q504U0 RNU6-271P-201ENST00000363858 105 ntBASIC2.17□□□□□ -2.06
C4orf46Q504U0 RNU6-899P-201ENST00000363947 107 ntBASIC2.17□□□□□ -2.06
C4orf46Q504U0 MT-TT-201ENST00000387460 66 ntBASIC2.17□□□□□ -2.06
C4orf46Q504U0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.17□□□□□ -2.06
C4orf46Q504U0 SNORA36B-201ENST00000410438 131 ntBASIC2.17□□□□□ -2.06
C4orf46Q504U0 SUMO1P2-201ENST00000452524 304 ntBASIC2.17□□□□□ -2.06
C4orf46Q504U0 AC233266.1-201ENST00000454518 96 ntBASIC2.17□□□□□ -2.06
C4orf46Q504U0 AC245047.8-201ENST00000456455 284 ntBASIC2.17□□□□□ -2.06
C4orf46Q504U0 RPL23AP54-201ENST00000495129 419 ntBASIC2.17□□□□□ -2.06
C4orf46Q504U0 AC008413.1-201ENST00000511864 177 ntBASIC2.17□□□□□ -2.06
C4orf46Q504U0 AC097462.1-201ENST00000514125 324 ntBASIC2.17□□□□□ -2.06
C4orf46Q504U0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
C4orf46Q504U0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.17□□□□□ -2.06
C4orf46Q504U0 Z83818.1-201ENST00000603584 150 ntBASIC2.17□□□□□ -2.06
C4orf46Q504U0 AC242852.1-201ENST00000612151 96 ntBASIC2.17□□□□□ -2.06
C4orf46Q504U0 MIR548AY-201ENST00000617669 107 ntBASIC2.17□□□□□ -2.06
C4orf46Q504U0 AC244015.1-201ENST00000622301 99 ntBASIC2.17□□□□□ -2.06
C4orf46Q504U0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
C4orf46Q504U0 Y_RNA.8-201ENST00000362353 102 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 Y_RNA.233-201ENST00000364407 101 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 RNU6-886P-201ENST00000384319 105 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 SNORA67.3-201ENST00000384366 140 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 RNA5SP323-201ENST00000391094 133 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 Y_RNA.621-201ENST00000411065 96 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 AL135786.1-201ENST00000415892 214 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 RPL31P63-201ENST00000422565 375 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.16□□□□□ -2.06
C4orf46Q504U0 AC099677.2-201ENST00000436385 175 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 AL513328.1-201ENST00000446460 224 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 PRSS3P4-201ENST00000453323 162 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.16□□□□□ -2.06
C4orf46Q504U0 snoU13.9-201ENST00000458927 103 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 TRBV12-1-201ENST00000479785 344 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 SCARNA8-201ENST00000515924 131 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 RNU7-115P-201ENST00000516433 55 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 RN7SKP57-201ENST00000517248 293 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 AC100767.1-201ENST00000528178 123 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 AL929325.1-201ENST00000603096 117 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 AC005972.2-201ENST00000604690 348 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 MIR338-201ENST00000636369 67 ntBASIC2.16□□□□□ -2.06
C4orf46Q504U0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
C4orf46Q504U0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
C4orf46Q504U0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
C4orf46Q504U0 ICE2P2-201ENST00000483823 2787 ntBASIC2.15□□□□□ -2.06
C4orf46Q504U0 MIR208A-201ENST00000362287 71 ntBASIC2.15□□□□□ -2.07
C4orf46Q504U0 RNU6-117P-201ENST00000365415 107 ntBASIC2.15□□□□□ -2.07
C4orf46Q504U0 SNORA9-201ENST00000384215 133 ntBASIC2.15□□□□□ -2.07
C4orf46Q504U0 MIR634-201ENST00000385208 97 ntBASIC2.15□□□□□ -2.07
C4orf46Q504U0 PCNPP3-201ENST00000393579 471 ntBASIC2.15□□□□□ -2.07
C4orf46Q504U0 AL117342.1-201ENST00000404861 406 ntBASIC2.15□□□□□ -2.07
C4orf46Q504U0 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.15□□□□□ -2.07
C4orf46Q504U0 RNU7-120P-201ENST00000459334 63 ntBASIC2.15□□□□□ -2.07
C4orf46Q504U0 COX6CP14-201ENST00000469580 174 ntBASIC2.15□□□□□ -2.07
C4orf46Q504U0 RNU6-1007P-201ENST00000516586 107 ntBASIC2.15□□□□□ -2.07
C4orf46Q504U0 RNU6-1291P-201ENST00000516591 104 ntBASIC2.15□□□□□ -2.07
C4orf46Q504U0 SNORA70.24-201ENST00000517233 118 ntBASIC2.15□□□□□ -2.07
C4orf46Q504U0 AL137100.2-201ENST00000555786 315 ntBASIC2.15□□□□□ -2.07
C4orf46Q504U0 MIR3684-201ENST00000579779 74 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms