Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 DEFB122-202ENST00000569013 197 ntBASIC1.91□□□□□ -2.1
CCDC38Q502W7 SNORA28-201ENST00000606769 126 ntBASIC1.91□□□□□ -2.1
CCDC38Q502W7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.9□□□□□ -2.1
CCDC38Q502W7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC38Q502W7 SNORD113-8-201ENST00000363497 74 ntBASIC1.9□□□□□ -2.11
CCDC38Q502W7 SNORA16.1-201ENST00000364597 132 ntBASIC1.9□□□□□ -2.11
CCDC38Q502W7 RNU6-136P-201ENST00000384663 107 ntBASIC1.9□□□□□ -2.11
CCDC38Q502W7 MIR934-201ENST00000401241 83 ntBASIC1.9□□□□□ -2.11
CCDC38Q502W7 RNU6-985P-201ENST00000410182 104 ntBASIC1.9□□□□□ -2.11
CCDC38Q502W7 AL591806.2-201ENST00000433122 173 ntBASIC1.9□□□□□ -2.11
CCDC38Q502W7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC38Q502W7 AC099513.1-201ENST00000490423 301 ntBASIC1.9□□□□□ -2.11
CCDC38Q502W7 RNU6-764P-201ENST00000516396 105 ntBASIC1.9□□□□□ -2.11
CCDC38Q502W7 RNU2-56P-201ENST00000516826 190 ntBASIC1.9□□□□□ -2.11
CCDC38Q502W7 RNU6-1137P-201ENST00000517073 99 ntBASIC1.9□□□□□ -2.11
CCDC38Q502W7 RNU6-1096P-201ENST00000517089 102 ntBASIC1.9□□□□□ -2.11
CCDC38Q502W7 AL358944.1-201ENST00000528537 144 ntBASIC1.9□□□□□ -2.11
CCDC38Q502W7 AC015720.1-201ENST00000565251 277 ntBASIC1.9□□□□□ -2.11
CCDC38Q502W7 MIR4769-201ENST00000584126 77 ntBASIC1.9□□□□□ -2.11
CCDC38Q502W7 AC021506.2-201ENST00000612354 169 ntBASIC1.9□□□□□ -2.11
CCDC38Q502W7 AC095038.3-201ENST00000634439 195 ntBASIC1.9□□□□□ -2.11
CCDC38Q502W7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC38Q502W7 RNU4-13P-201ENST00000364019 141 ntBASIC1.89□□□□□ -2.11
CCDC38Q502W7 SNORD116-13-201ENST00000384408 92 ntBASIC1.89□□□□□ -2.11
CCDC38Q502W7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC38Q502W7 AC005908.1-201ENST00000468701 347 ntBASIC1.89□□□□□ -2.11
CCDC38Q502W7 RNU7-28P-201ENST00000516759 62 ntBASIC1.89□□□□□ -2.11
CCDC38Q502W7 AP003072.1-201ENST00000531740 145 ntBASIC1.89□□□□□ -2.11
CCDC38Q502W7 DEFB117-201ENST00000602356 141 ntBASIC1.89□□□□□ -2.11
CCDC38Q502W7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC38Q502W7 RNU6-1123P-201ENST00000362347 106 ntBASIC1.88□□□□□ -2.11
CCDC38Q502W7 RNU6-694P-201ENST00000364071 147 ntBASIC1.88□□□□□ -2.11
CCDC38Q502W7 Y_RNA.383-201ENST00000383855 97 ntBASIC1.88□□□□□ -2.11
CCDC38Q502W7 RNU6-1011P-201ENST00000384668 107 ntBASIC1.88□□□□□ -2.11
CCDC38Q502W7 RNU6-855P-201ENST00000410395 104 ntBASIC1.88□□□□□ -2.11
CCDC38Q502W7 AC004965.1-201ENST00000413033 213 ntBASIC1.88□□□□□ -2.11
CCDC38Q502W7 POLR2KP2-201ENST00000438155 177 ntBASIC1.88□□□□□ -2.11
CCDC38Q502W7 snoU13.23-201ENST00000458863 104 ntBASIC1.88□□□□□ -2.11
CCDC38Q502W7 AC010655.3-201ENST00000478818 450 ntBASIC1.88□□□□□ -2.11
CCDC38Q502W7 RNU6-1291P-201ENST00000516591 104 ntBASIC1.88□□□□□ -2.11
CCDC38Q502W7 AC004832.4-201ENST00000608952 331 ntBASIC1.88□□□□□ -2.11
CCDC38Q502W7 SNORA1B-201ENST00000362535 133 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 SNORA63-201ENST00000363450 132 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 Y_RNA.153-201ENST00000363615 91 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 Y_RNA.172-201ENST00000363765 102 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 RNU6-770P-201ENST00000363929 105 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 Y_RNA.210-201ENST00000364161 110 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 Y_RNA.214-201ENST00000364201 112 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 Y_RNA.222-201ENST00000364264 102 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 Y_RNA.265-201ENST00000364677 108 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 Y_RNA.286-201ENST00000364813 102 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 Y_RNA.326-201ENST00000365176 113 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC38Q502W7 STAG3L5P-204ENST00000443759 179 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 RPS20P10-201ENST00000451209 253 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 AC233266.1-201ENST00000454518 96 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 HMGN1P10-201ENST00000474557 553 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 ICE2P2-201ENST00000483823 2787 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 RNU6-237P-201ENST00000515985 71 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 RNU6-1143P-201ENST00000516125 104 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC38Q502W7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC38Q502W7 MIR4419B-201ENST00000577260 68 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 AC005972.2-201ENST00000604690 348 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 AC242852.1-201ENST00000612151 96 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 AC244015.1-201ENST00000622301 99 ntBASIC1.87□□□□□ -2.11
CCDC38Q502W7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC38Q502W7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC38Q502W7 RNU4-90P-201ENST00000362773 141 ntBASIC1.86□□□□□ -2.11
CCDC38Q502W7 SNORD48-201ENST00000364953 64 ntBASIC1.86□□□□□ -2.11
CCDC38Q502W7 Y_RNA.341-201ENST00000365341 102 ntBASIC1.86□□□□□ -2.11
CCDC38Q502W7 Y_RNA.368-201ENST00000365547 113 ntBASIC1.86□□□□□ -2.11
CCDC38Q502W7 RNU6-338P-201ENST00000383888 105 ntBASIC1.86□□□□□ -2.11
CCDC38Q502W7 Y_RNA.456-201ENST00000384232 111 ntBASIC1.86□□□□□ -2.11
CCDC38Q502W7 AC019129.1-201ENST00000403786 261 ntBASIC1.86□□□□□ -2.11
CCDC38Q502W7 Y_RNA.602-201ENST00000410535 92 ntBASIC1.86□□□□□ -2.11
CCDC38Q502W7 ELOCP20-201ENST00000422460 345 ntBASIC1.86□□□□□ -2.11
CCDC38Q502W7 RPS4XP11-201ENST00000446897 772 ntBASIC1.86□□□□□ -2.11
CCDC38Q502W7 HSPE1P24-201ENST00000450782 238 ntBASIC1.86□□□□□ -2.11
CCDC38Q502W7 RNU6-496P-201ENST00000516145 99 ntBASIC1.86□□□□□ -2.11
CCDC38Q502W7 RNU6-548P-201ENST00000517083 115 ntBASIC1.86□□□□□ -2.11
CCDC38Q502W7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC38Q502W7 AC073349.3-201ENST00000617616 186 ntBASIC1.86□□□□□ -2.11
CCDC38Q502W7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC38Q502W7 Y_RNA.105-201ENST00000363182 111 ntBASIC1.85□□□□□ -2.11
CCDC38Q502W7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC38Q502W7 RNU6-997P-201ENST00000384725 107 ntBASIC1.85□□□□□ -2.11
CCDC38Q502W7 MIR764-201ENST00000390811 85 ntBASIC1.85□□□□□ -2.11
CCDC38Q502W7 SNORA12.1-201ENST00000390873 148 ntBASIC1.85□□□□□ -2.11
CCDC38Q502W7 Y_RNA.581-201ENST00000391017 97 ntBASIC1.85□□□□□ -2.11
CCDC38Q502W7 RNU6-1248P-201ENST00000391096 64 ntBASIC1.85□□□□□ -2.11
CCDC38Q502W7 RNA5SP482-201ENST00000391269 118 ntBASIC1.85□□□□□ -2.11
CCDC38Q502W7 RNU6-121P-201ENST00000410525 99 ntBASIC1.85□□□□□ -2.11
CCDC38Q502W7 PGBD4P5-201ENST00000445958 426 ntBASIC1.85□□□□□ -2.11
CCDC38Q502W7 HSPE1P25-201ENST00000455484 251 ntBASIC1.85□□□□□ -2.11
CCDC38Q502W7 AL049830.1-201ENST00000468034 425 ntBASIC1.85□□□□□ -2.11
CCDC38Q502W7 RPS29P11-201ENST00000496507 171 ntBASIC1.85□□□□□ -2.11
CCDC38Q502W7 AC107393.1-201ENST00000512403 346 ntBASIC1.85□□□□□ -2.11
CCDC38Q502W7 RNY3P15-201ENST00000516297 97 ntBASIC1.85□□□□□ -2.11
CCDC38Q502W7 AC015712.3-201ENST00000559380 164 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 407.9 ms