Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CDH17Q12864 Y_RNA.36-201ENST00000362602 112 ntBASIC0.73□□□□□ -2.29
CDH17Q12864 RNU4-40P-201ENST00000364351 143 ntBASIC0.73□□□□□ -2.29
CDH17Q12864 RNU4-41P-201ENST00000364426 143 ntBASIC0.73□□□□□ -2.29
CDH17Q12864 Y_RNA.243-201ENST00000364481 109 ntBASIC0.73□□□□□ -2.29
CDH17Q12864 Y_RNA.404-201ENST00000383978 102 ntBASIC0.73□□□□□ -2.29
CDH17Q12864 MIR1277-201ENST00000408536 78 ntBASIC0.73□□□□□ -2.29
CDH17Q12864 RNA5SP475-201ENST00000410568 110 ntBASIC0.73□□□□□ -2.29
CDH17Q12864 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.73□□□□□ -2.29
CDH17Q12864 AC114482.1-201ENST00000418010 247 ntBASIC0.73□□□□□ -2.29
CDH17Q12864 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.73□□□□□ -2.29
CDH17Q12864 RNU6-625P-201ENST00000459412 107 ntBASIC0.73□□□□□ -2.29
CDH17Q12864 AL049830.1-201ENST00000468034 425 ntBASIC0.73□□□□□ -2.29
CDH17Q12864 RPL7P42-201ENST00000481005 679 ntBASIC0.73□□□□□ -2.29
CDH17Q12864 SNORA40.9-201ENST00000515895 93 ntBASIC0.73□□□□□ -2.29
CDH17Q12864 RNU6-1116P-201ENST00000517269 99 ntBASIC0.73□□□□□ -2.29
CDH17Q12864 AC090142.3-201ENST00000519012 385 ntBASIC0.73□□□□□ -2.29
CDH17Q12864 AC136628.3-201ENST00000521868 290 ntBASIC0.73□□□□□ -2.29
CDH17Q12864 AL358944.1-201ENST00000528537 144 ntBASIC0.73□□□□□ -2.29
CDH17Q12864 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.73□□□□□ -2.29
CDH17Q12864 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.73□□□□□ -2.29
CDH17Q12864 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.73□□□□□ -2.29
CDH17Q12864 AL357312.1-201ENST00000603879 298 ntBASIC0.73□□□□□ -2.29
CDH17Q12864 PVT1_3.1-201ENST00000620853 95 ntBASIC0.73□□□□□ -2.29
CDH17Q12864 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CDH17Q12864 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
CDH17Q12864 AC008163.1-202ENST00000636004 2889 ntBASIC0.72□□□□□ -2.29
CDH17Q12864 RNU6-601P-201ENST00000384540 107 ntBASIC0.72□□□□□ -2.29
CDH17Q12864 RNU6-136P-201ENST00000384663 107 ntBASIC0.72□□□□□ -2.29
CDH17Q12864 MIR608-201ENST00000384820 100 ntBASIC0.72□□□□□ -2.29
CDH17Q12864 MIR526A1-201ENST00000384897 85 ntBASIC0.72□□□□□ -2.29
CDH17Q12864 AC006461.1-201ENST00000412637 326 ntBASIC0.72□□□□□ -2.29
CDH17Q12864 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.72□□□□□ -2.29
CDH17Q12864 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.72□□□□□ -2.29
CDH17Q12864 MTND3P10-201ENST00000450967 341 ntBASIC0.72□□□□□ -2.29
CDH17Q12864 AC233266.1-201ENST00000454518 96 ntBASIC0.72□□□□□ -2.29
CDH17Q12864 RPL39P39-201ENST00000455840 151 ntBASIC0.72□□□□□ -2.29
CDH17Q12864 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.72□□□□□ -2.29
CDH17Q12864 SNORD111.1-201ENST00000516421 86 ntBASIC0.72□□□□□ -2.29
CDH17Q12864 RNU6-197P-201ENST00000516680 100 ntBASIC0.72□□□□□ -2.29
CDH17Q12864 RNU6-63P-201ENST00000516690 95 ntBASIC0.72□□□□□ -2.29
CDH17Q12864 RNU6-1096P-201ENST00000517089 102 ntBASIC0.72□□□□□ -2.29
CDH17Q12864 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.72□□□□□ -2.29
CDH17Q12864 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.72□□□□□ -2.29
CDH17Q12864 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.72□□□□□ -2.29
CDH17Q12864 AC242852.1-201ENST00000612151 96 ntBASIC0.72□□□□□ -2.29
CDH17Q12864 AC106800.4-201ENST00000614905 153 ntBASIC0.72□□□□□ -2.29
CDH17Q12864 AC007014.2-201ENST00000615581 479 ntBASIC0.72□□□□□ -2.29
CDH17Q12864 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.72□□□□□ -2.29
CDH17Q12864 AC244015.1-201ENST00000622301 99 ntBASIC0.72□□□□□ -2.29
CDH17Q12864 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.72□□□□□ -2.29
CDH17Q12864 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CDH17Q12864 SNORD114-7-201ENST00000362520 77 ntBASIC0.71□□□□□ -2.3
CDH17Q12864 Y_RNA.354-201ENST00000365448 111 ntBASIC0.71□□□□□ -2.3
CDH17Q12864 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
CDH17Q12864 RNU6-969P-201ENST00000383900 105 ntBASIC0.71□□□□□ -2.3
CDH17Q12864 Y_RNA.482-201ENST00000384377 111 ntBASIC0.71□□□□□ -2.3
CDH17Q12864 SNORA80D-201ENST00000384488 135 ntBASIC0.71□□□□□ -2.3
CDH17Q12864 MIR520G-201ENST00000385064 90 ntBASIC0.71□□□□□ -2.3
CDH17Q12864 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
CDH17Q12864 AC092423.1-201ENST00000430165 186 ntBASIC0.71□□□□□ -2.3
CDH17Q12864 AC107399.1-201ENST00000451226 265 ntBASIC0.71□□□□□ -2.3
CDH17Q12864 SUMO1P2-201ENST00000452524 304 ntBASIC0.71□□□□□ -2.3
CDH17Q12864 AC069439.1-201ENST00000494739 167 ntBASIC0.71□□□□□ -2.3
CDH17Q12864 RNA5SP436-201ENST00000516020 115 ntBASIC0.71□□□□□ -2.3
CDH17Q12864 PRELID3BP2-201ENST00000605362 201 ntBASIC0.71□□□□□ -2.3
CDH17Q12864 AC004832.4-201ENST00000608952 331 ntBASIC0.71□□□□□ -2.3
CDH17Q12864 AL096861.1-201ENST00000610899 123 ntBASIC0.71□□□□□ -2.3
CDH17Q12864 HSBP1P2-201ENST00000299671 229 ntBASIC0.7□□□□□ -2.3
CDH17Q12864 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
CDH17Q12864 Y_RNA.88-201ENST00000363029 99 ntBASIC0.7□□□□□ -2.3
CDH17Q12864 RNU6-833P-201ENST00000363486 107 ntBASIC0.7□□□□□ -2.3
CDH17Q12864 Y_RNA.361-201ENST00000365515 120 ntBASIC0.7□□□□□ -2.3
CDH17Q12864 SNORA75.2-201ENST00000391138 150 ntBASIC0.7□□□□□ -2.3
CDH17Q12864 SNORA75.3-201ENST00000391231 150 ntBASIC0.7□□□□□ -2.3
CDH17Q12864 SNORD12B-201ENST00000410433 91 ntBASIC0.7□□□□□ -2.3
CDH17Q12864 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
CDH17Q12864 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.7□□□□□ -2.3
CDH17Q12864 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.7□□□□□ -2.3
CDH17Q12864 snoU13.25-201ENST00000458945 104 ntBASIC0.7□□□□□ -2.3
CDH17Q12864 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.7□□□□□ -2.3
CDH17Q12864 AC116353.2-201ENST00000505332 712 ntBASIC0.7□□□□□ -2.3
CDH17Q12864 DEFB108E-201ENST00000524692 240 ntBASIC0.7□□□□□ -2.3
CDH17Q12864 MIR6779-201ENST00000617283 64 ntBASIC0.7□□□□□ -2.3
CDH17Q12864 AC092794.2-201ENST00000620933 563 ntBASIC0.7□□□□□ -2.3
CDH17Q12864 Y_RNA.6-201ENST00000362350 114 ntBASIC0.69□□□□□ -2.3
CDH17Q12864 RNU6-1301P-201ENST00000362724 104 ntBASIC0.69□□□□□ -2.3
CDH17Q12864 RNA5SP511-201ENST00000410487 115 ntBASIC0.69□□□□□ -2.3
CDH17Q12864 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.69□□□□□ -2.3
CDH17Q12864 LINC01399-202ENST00000458450 244 ntBASIC0.69□□□□□ -2.3
CDH17Q12864 RNU6-1132P-201ENST00000459214 107 ntBASIC0.69□□□□□ -2.3
CDH17Q12864 RNU7-21P-201ENST00000459430 62 ntBASIC0.69□□□□□ -2.3
CDH17Q12864 RPL17P19-201ENST00000489069 552 ntBASIC0.69□□□□□ -2.3
CDH17Q12864 MIR5000-201ENST00000577717 103 ntBASIC0.69□□□□□ -2.3
CDH17Q12864 AC005899.2-201ENST00000584353 90 ntBASIC0.69□□□□□ -2.3
CDH17Q12864 MIR1244-1-201ENST00000612829 85 ntBASIC0.69□□□□□ -2.3
CDH17Q12864 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
CDH17Q12864 MIR1244-3-201ENST00000635744 85 ntBASIC0.69□□□□□ -2.3
CDH17Q12864 MIR1244-2-201ENST00000636449 85 ntBASIC0.69□□□□□ -2.3
CDH17Q12864 MIR1244-4-202ENST00000636813 85 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms