Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNU6-966P-201ENST00000516479 104 ntBASIC1.16□□□□□ -2.22
SCN1BQ07699 MIR4524B-201ENST00000581569 115 ntBASIC1.16□□□□□ -2.22
SCN1BQ07699 UBE2V2P2-201ENST00000587677 504 ntBASIC1.16□□□□□ -2.22
SCN1BQ07699 AL357312.1-201ENST00000603879 298 ntBASIC1.16□□□□□ -2.22
SCN1BQ07699 U6.92-201ENST00000636464 89 ntBASIC1.16□□□□□ -2.22
SCN1BQ07699 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SCN1BQ07699 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.15□□□□□ -2.23
SCN1BQ07699 Y_RNA.446-201ENST00000384178 104 ntBASIC1.15□□□□□ -2.23
SCN1BQ07699 MIR526A1-201ENST00000384897 85 ntBASIC1.15□□□□□ -2.23
SCN1BQ07699 SNORA67.5-201ENST00000391036 107 ntBASIC1.15□□□□□ -2.23
SCN1BQ07699 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.15□□□□□ -2.23
SCN1BQ07699 AC245047.7-201ENST00000440265 293 ntBASIC1.15□□□□□ -2.23
SCN1BQ07699 RPL39P39-201ENST00000455840 151 ntBASIC1.15□□□□□ -2.23
SCN1BQ07699 OR2A41P-201ENST00000473586 105 ntBASIC1.15□□□□□ -2.23
SCN1BQ07699 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.15□□□□□ -2.23
SCN1BQ07699 CYCTP-201ENST00000504253 315 ntBASIC1.15□□□□□ -2.23
SCN1BQ07699 Y_RNA.718-201ENST00000517110 102 ntBASIC1.15□□□□□ -2.23
SCN1BQ07699 AC006600.1-201ENST00000572529 153 ntBASIC1.15□□□□□ -2.23
SCN1BQ07699 MIR4303-201ENST00000581299 66 ntBASIC1.15□□□□□ -2.23
SCN1BQ07699 FAM106DP-201ENST00000586416 501 ntBASIC1.15□□□□□ -2.23
SCN1BQ07699 AL132765.2-201ENST00000610812 351 ntBASIC1.15□□□□□ -2.23
SCN1BQ07699 AL591926.4-201ENST00000616895 298 ntBASIC1.15□□□□□ -2.23
SCN1BQ07699 ZNF209P-201ENST00000593450 2304 ntBASIC1.14□□□□□ -2.23
SCN1BQ07699 Y_RNA.172-201ENST00000363765 102 ntBASIC1.14□□□□□ -2.23
SCN1BQ07699 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.14□□□□□ -2.23
SCN1BQ07699 RNU2-61P-201ENST00000411069 191 ntBASIC1.14□□□□□ -2.23
SCN1BQ07699 RNU6-1199P-201ENST00000411249 104 ntBASIC1.14□□□□□ -2.23
SCN1BQ07699 RNU6-1054P-201ENST00000411293 104 ntBASIC1.14□□□□□ -2.23
SCN1BQ07699 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.14□□□□□ -2.23
SCN1BQ07699 CHEK2P4-201ENST00000450340 246 ntBASIC1.14□□□□□ -2.23
SCN1BQ07699 SNORD116-28-201ENST00000516123 91 ntBASIC1.14□□□□□ -2.23
SCN1BQ07699 RNU6-911P-201ENST00000516523 104 ntBASIC1.14□□□□□ -2.23
SCN1BQ07699 AC084781.2-201ENST00000615568 161 ntBASIC1.14□□□□□ -2.23
SCN1BQ07699 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.14□□□□□ -2.23
SCN1BQ07699 Y_RNA.27-201ENST00000362540 103 ntBASIC1.13□□□□□ -2.23
SCN1BQ07699 SNORA72.1-201ENST00000363485 129 ntBASIC1.13□□□□□ -2.23
SCN1BQ07699 RNU6-833P-201ENST00000363486 107 ntBASIC1.13□□□□□ -2.23
SCN1BQ07699 SNORA70.7-201ENST00000384159 133 ntBASIC1.13□□□□□ -2.23
SCN1BQ07699 RNU6-1105P-201ENST00000384774 107 ntBASIC1.13□□□□□ -2.23
SCN1BQ07699 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.13□□□□□ -2.23
SCN1BQ07699 AL163540.1-201ENST00000485382 386 ntBASIC1.13□□□□□ -2.23
SCN1BQ07699 AC114811.1-201ENST00000507207 168 ntBASIC1.13□□□□□ -2.23
SCN1BQ07699 SNORD111.1-201ENST00000516421 86 ntBASIC1.13□□□□□ -2.23
SCN1BQ07699 AC011604.1-201ENST00000545978 196 ntBASIC1.13□□□□□ -2.23
SCN1BQ07699 AC004832.4-201ENST00000608952 331 ntBASIC1.13□□□□□ -2.23
SCN1BQ07699 Y_RNA.140-201ENST00000363474 103 ntBASIC1.12□□□□□ -2.23
SCN1BQ07699 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
SCN1BQ07699 AC093019.1-201ENST00000443135 252 ntBASIC1.12□□□□□ -2.23
SCN1BQ07699 RNU6-436P-201ENST00000516171 114 ntBASIC1.12□□□□□ -2.23
SCN1BQ07699 AC090821.2-201ENST00000523552 176 ntBASIC1.12□□□□□ -2.23
SCN1BQ07699 AL355375.2-201ENST00000574825 175 ntBASIC1.12□□□□□ -2.23
SCN1BQ07699 AL050343.2-201ENST00000607338 280 ntBASIC1.12□□□□□ -2.23
SCN1BQ07699 AL353997.5-201ENST00000618886 171 ntBASIC1.12□□□□□ -2.23
SCN1BQ07699 AL008636.1-201ENST00000625038 1018 ntBASIC1.12□□□□□ -2.23
SCN1BQ07699 AC027279.3-201ENST00000625055 122 ntBASIC1.12□□□□□ -2.23
SCN1BQ07699 Y_RNA.363-201ENST00000365529 113 ntBASIC1.11□□□□□ -2.23
SCN1BQ07699 Y_RNA.428-201ENST00000384078 102 ntBASIC1.11□□□□□ -2.23
SCN1BQ07699 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
SCN1BQ07699 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.11□□□□□ -2.23
SCN1BQ07699 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.11□□□□□ -2.23
SCN1BQ07699 LINC01399-202ENST00000458450 244 ntBASIC1.11□□□□□ -2.23
SCN1BQ07699 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.11□□□□□ -2.23
SCN1BQ07699 VN1R91P-201ENST00000594377 169 ntBASIC1.11□□□□□ -2.23
SCN1BQ07699 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SCN1BQ07699 Y_RNA.146-201ENST00000363549 102 ntBASIC1.1□□□□□ -2.23
SCN1BQ07699 Y_RNA.230-201ENST00000364348 109 ntBASIC1.1□□□□□ -2.23
SCN1BQ07699 U8.5-201ENST00000364528 136 ntBASIC1.1□□□□□ -2.23
SCN1BQ07699 Y_RNA.303-201ENST00000364998 94 ntBASIC1.1□□□□□ -2.23
SCN1BQ07699 Y_RNA.336-201ENST00000365307 109 ntBASIC1.1□□□□□ -2.23
SCN1BQ07699 Y_RNA.463-201ENST00000384271 102 ntBASIC1.1□□□□□ -2.23
SCN1BQ07699 MTCO2P27-201ENST00000420740 428 ntBASIC1.1□□□□□ -2.23
SCN1BQ07699 AC063976.4-201ENST00000421971 163 ntBASIC1.1□□□□□ -2.23
SCN1BQ07699 RNU1-123P-201ENST00000458950 160 ntBASIC1.1□□□□□ -2.23
SCN1BQ07699 Y_RNA.632-201ENST00000459189 102 ntBASIC1.1□□□□□ -2.23
SCN1BQ07699 RPS23P4-201ENST00000487908 423 ntBASIC1.1□□□□□ -2.23
SCN1BQ07699 AC091951.2-201ENST00000500762 203 ntBASIC1.1□□□□□ -2.23
SCN1BQ07699 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.1□□□□□ -2.23
SCN1BQ07699 SNORD116.3-201ENST00000517176 78 ntBASIC1.1□□□□□ -2.23
SCN1BQ07699 AC022441.3-201ENST00000605737 136 ntBASIC1.1□□□□□ -2.23
SCN1BQ07699 AL096861.1-201ENST00000610899 123 ntBASIC1.1□□□□□ -2.23
SCN1BQ07699 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.1□□□□□ -2.23
SCN1BQ07699 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.1□□□□□ -2.23
SCN1BQ07699 MIR4272-201ENST00000635924 64 ntBASIC1.1□□□□□ -2.23
SCN1BQ07699 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
SCN1BQ07699 Y_RNA.253-201ENST00000364562 112 ntBASIC1.09□□□□□ -2.23
SCN1BQ07699 Y_RNA.329-201ENST00000365209 107 ntBASIC1.09□□□□□ -2.23
SCN1BQ07699 MIR452-201ENST00000385020 85 ntBASIC1.09□□□□□ -2.23
SCN1BQ07699 MIR764-201ENST00000390811 85 ntBASIC1.09□□□□□ -2.23
SCN1BQ07699 MLLT10P1-201ENST00000418346 262 ntBASIC1.09□□□□□ -2.23
SCN1BQ07699 snoU13.23-201ENST00000458863 104 ntBASIC1.09□□□□□ -2.23
SCN1BQ07699 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.09□□□□□ -2.23
SCN1BQ07699 SNORA25.10-201ENST00000515926 124 ntBASIC1.09□□□□□ -2.23
SCN1BQ07699 SNORD79.1-201ENST00000516069 84 ntBASIC1.09□□□□□ -2.23
SCN1BQ07699 RN7SKP295-201ENST00000517264 153 ntBASIC1.09□□□□□ -2.23
SCN1BQ07699 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.09□□□□□ -2.23
SCN1BQ07699 HSPE1P19-201ENST00000603327 295 ntBASIC1.09□□□□□ -2.23
SCN1BQ07699 AL512598.1-201ENST00000610158 273 ntBASIC1.09□□□□□ -2.23
SCN1BQ07699 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
SCN1BQ07699 Y_RNA.70-201ENST00000362886 110 ntBASIC1.08□□□□□ -2.24
SCN1BQ07699 RNU6-1175P-201ENST00000365200 107 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms