Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.16□□□□□ -2.22
CSTF1Q05048 RPS27P1-201ENST00000450552 247 ntBASIC1.16□□□□□ -2.22
CSTF1Q05048 HSPE1P13-201ENST00000451143 297 ntBASIC1.16□□□□□ -2.22
CSTF1Q05048 RPL17P19-201ENST00000489069 552 ntBASIC1.16□□□□□ -2.22
CSTF1Q05048 AL133373.1-201ENST00000497098 94 ntBASIC1.16□□□□□ -2.22
CSTF1Q05048 RN7SKP179-201ENST00000516126 217 ntBASIC1.16□□□□□ -2.22
CSTF1Q05048 SNORA31.10-201ENST00000516482 106 ntBASIC1.16□□□□□ -2.22
CSTF1Q05048 RNU6-1153P-201ENST00000516760 105 ntBASIC1.16□□□□□ -2.22
CSTF1Q05048 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.16□□□□□ -2.22
CSTF1Q05048 RN7SL793P-201ENST00000583259 296 ntBASIC1.16□□□□□ -2.22
CSTF1Q05048 MIR8054-201ENST00000620877 86 ntBASIC1.16□□□□□ -2.22
CSTF1Q05048 U6.108-201ENST00000637764 58 ntBASIC1.16□□□□□ -2.22
CSTF1Q05048 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
CSTF1Q05048 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CSTF1Q05048 Y_RNA.61-201ENST00000362835 102 ntBASIC1.15□□□□□ -2.23
CSTF1Q05048 Y_RNA.216-201ENST00000364205 93 ntBASIC1.15□□□□□ -2.23
CSTF1Q05048 SNORD42.2-201ENST00000365570 69 ntBASIC1.15□□□□□ -2.23
CSTF1Q05048 RNU6-1040P-201ENST00000383974 107 ntBASIC1.15□□□□□ -2.23
CSTF1Q05048 RNU6-1031P-201ENST00000384773 107 ntBASIC1.15□□□□□ -2.23
CSTF1Q05048 RNU6-1156P-201ENST00000410365 100 ntBASIC1.15□□□□□ -2.23
CSTF1Q05048 USP9YP16-201ENST00000430287 407 ntBASIC1.15□□□□□ -2.23
CSTF1Q05048 TOMM22P2-201ENST00000430735 237 ntBASIC1.15□□□□□ -2.23
CSTF1Q05048 USP9YP23-201ENST00000455085 407 ntBASIC1.15□□□□□ -2.23
CSTF1Q05048 AC010469.2-201ENST00000496412 480 ntBASIC1.15□□□□□ -2.23
CSTF1Q05048 AC093023.1-201ENST00000547375 507 ntBASIC1.15□□□□□ -2.23
CSTF1Q05048 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.15□□□□□ -2.23
CSTF1Q05048 AL512310.8-201ENST00000550183 120 ntBASIC1.15□□□□□ -2.23
CSTF1Q05048 MIR5000-201ENST00000577717 103 ntBASIC1.15□□□□□ -2.23
CSTF1Q05048 MIR4438-201ENST00000585271 93 ntBASIC1.15□□□□□ -2.23
CSTF1Q05048 AC022432.1-201ENST00000595739 310 ntBASIC1.15□□□□□ -2.23
CSTF1Q05048 SNORD58B-201ENST00000607313 66 ntBASIC1.15□□□□□ -2.23
CSTF1Q05048 RNU6-474P-201ENST00000384243 107 ntBASIC1.14□□□□□ -2.23
CSTF1Q05048 Y_RNA.535-201ENST00000384612 99 ntBASIC1.14□□□□□ -2.23
CSTF1Q05048 MIR625-201ENST00000385047 85 ntBASIC1.14□□□□□ -2.23
CSTF1Q05048 MIR216A-201ENST00000385063 110 ntBASIC1.14□□□□□ -2.23
CSTF1Q05048 MRPL42P3-201ENST00000401492 326 ntBASIC1.14□□□□□ -2.23
CSTF1Q05048 RPL23AP50-201ENST00000434149 455 ntBASIC1.14□□□□□ -2.23
CSTF1Q05048 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.14□□□□□ -2.23
CSTF1Q05048 RNU6-1114P-201ENST00000516022 107 ntBASIC1.14□□□□□ -2.23
CSTF1Q05048 AC090617.3-201ENST00000573670 475 ntBASIC1.14□□□□□ -2.23
CSTF1Q05048 AL080274.1-201ENST00000605565 220 ntBASIC1.14□□□□□ -2.23
CSTF1Q05048 AC100812.1-201ENST00000607622 580 ntBASIC1.14□□□□□ -2.23
CSTF1Q05048 AC007485.1-201ENST00000616755 206 ntBASIC1.14□□□□□ -2.23
CSTF1Q05048 U6.73-201ENST00000619194 103 ntBASIC1.14□□□□□ -2.23
CSTF1Q05048 AC068647.2-201ENST00000637380 353 ntBASIC1.14□□□□□ -2.23
CSTF1Q05048 RNU6-1123P-201ENST00000362347 106 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 RNU6-137P-201ENST00000363680 108 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 RNU6-961P-201ENST00000363893 105 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 Y_RNA.187-201ENST00000363918 113 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 RNU6-454P-201ENST00000364292 107 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 Y_RNA.364-201ENST00000365532 101 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 Y_RNA.384-201ENST00000383909 102 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 RNU6-1145P-201ENST00000384246 107 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 Y_RNA.592-201ENST00000410274 109 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 PMCHL1-202ENST00000423102 261 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 AC018865.2-201ENST00000423631 129 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 MTCYBP10-201ENST00000424905 650 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.13□□□□□ -2.23
CSTF1Q05048 AL137792.2-201ENST00000443484 235 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 SNORD65B-201ENST00000459126 73 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 RNU6-1132P-201ENST00000459214 107 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 AC010655.3-201ENST00000478818 450 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 Y_RNA.683-201ENST00000516508 93 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 RNU4-77P-201ENST00000516692 156 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 AC022868.1-201ENST00000517767 391 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 MIR4778-201ENST00000577635 80 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 MIR5690-201ENST00000583739 73 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 AC011476.5-201ENST00000615594 130 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 uc_338.22-201ENST00000622722 187 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 SNORD3E-202ENST00000627253 216 ntBASIC1.13□□□□□ -2.23
CSTF1Q05048 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CSTF1Q05048 RNU6-926P-201ENST00000384075 107 ntBASIC1.12□□□□□ -2.23
CSTF1Q05048 Y_RNA.577-201ENST00000384794 101 ntBASIC1.12□□□□□ -2.23
CSTF1Q05048 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CSTF1Q05048 AL034345.1-201ENST00000407768 123 ntBASIC1.12□□□□□ -2.23
CSTF1Q05048 STAG3L5P-204ENST00000443759 179 ntBASIC1.12□□□□□ -2.23
CSTF1Q05048 PGBD4P5-201ENST00000445958 426 ntBASIC1.12□□□□□ -2.23
CSTF1Q05048 RNU7-99P-201ENST00000516271 62 ntBASIC1.12□□□□□ -2.23
CSTF1Q05048 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.12□□□□□ -2.23
CSTF1Q05048 AC211469.2-201ENST00000605461 205 ntBASIC1.12□□□□□ -2.23
CSTF1Q05048 MIR4272-201ENST00000635924 64 ntBASIC1.12□□□□□ -2.23
CSTF1Q05048 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.12□□□□□ -2.23
CSTF1Q05048 AC073544.1-201ENST00000600110 1595 ntBASIC1.12□□□□□ -2.23
CSTF1Q05048 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
CSTF1Q05048 RNU6-879P-201ENST00000364328 108 ntBASIC1.11□□□□□ -2.23
CSTF1Q05048 RNU6-700P-201ENST00000391043 107 ntBASIC1.11□□□□□ -2.23
CSTF1Q05048 Y_RNA.645-201ENST00000391229 102 ntBASIC1.11□□□□□ -2.23
CSTF1Q05048 AC005534.2-201ENST00000431047 433 ntBASIC1.11□□□□□ -2.23
CSTF1Q05048 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.11□□□□□ -2.23
CSTF1Q05048 AL160004.2-201ENST00000432935 350 ntBASIC1.11□□□□□ -2.23
CSTF1Q05048 DYNLT3P2-201ENST00000442517 295 ntBASIC1.11□□□□□ -2.23
CSTF1Q05048 UQCRBP2-201ENST00000447827 297 ntBASIC1.11□□□□□ -2.23
CSTF1Q05048 NDUFB4P10-201ENST00000452541 359 ntBASIC1.11□□□□□ -2.23
CSTF1Q05048 RNU6-922P-201ENST00000516753 99 ntBASIC1.11□□□□□ -2.23
CSTF1Q05048 RNU7-128P-201ENST00000517247 62 ntBASIC1.11□□□□□ -2.23
CSTF1Q05048 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.11□□□□□ -2.23
CSTF1Q05048 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.11□□□□□ -2.23
CSTF1Q05048 AL008636.1-201ENST00000625038 1018 ntBASIC1.11□□□□□ -2.23
CSTF1Q05048 Y_RNA.30-201ENST00000362572 97 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms