Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC016925.2-201ENST00000605108 242 ntBASIC1.56□□□□□ -2.16
CDK3Q00526 BX248123.2-201ENST00000606318 124 ntBASIC1.56□□□□□ -2.16
CDK3Q00526 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CDK3Q00526 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
CDK3Q00526 SNORA63.7-201ENST00000365579 123 ntBASIC1.55□□□□□ -2.16
CDK3Q00526 SNORD63-201ENST00000384262 68 ntBASIC1.55□□□□□ -2.16
CDK3Q00526 RNU6-21P-201ENST00000384710 107 ntBASIC1.55□□□□□ -2.16
CDK3Q00526 RNU6-1031P-201ENST00000384773 107 ntBASIC1.55□□□□□ -2.16
CDK3Q00526 RNU4-30P-201ENST00000410245 143 ntBASIC1.55□□□□□ -2.16
CDK3Q00526 RPL31P63-201ENST00000422565 375 ntBASIC1.55□□□□□ -2.16
CDK3Q00526 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.55□□□□□ -2.16
CDK3Q00526 HSPE1P24-201ENST00000450782 238 ntBASIC1.55□□□□□ -2.16
CDK3Q00526 HSPE1P13-201ENST00000451143 297 ntBASIC1.55□□□□□ -2.16
CDK3Q00526 RNU6-1291P-201ENST00000516591 104 ntBASIC1.55□□□□□ -2.16
CDK3Q00526 RNU2-56P-201ENST00000516826 190 ntBASIC1.55□□□□□ -2.16
CDK3Q00526 AC021506.2-201ENST00000612354 169 ntBASIC1.55□□□□□ -2.16
CDK3Q00526 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.55□□□□□ -2.16
CDK3Q00526 MIR8063-201ENST00000621930 81 ntBASIC1.55□□□□□ -2.16
CDK3Q00526 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CDK3Q00526 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
CDK3Q00526 ICE2P2-201ENST00000483823 2787 ntBASIC1.54□□□□□ -2.16
CDK3Q00526 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CDK3Q00526 Y_RNA.202-201ENST00000364083 110 ntBASIC1.54□□□□□ -2.16
CDK3Q00526 MIR562-201ENST00000384894 95 ntBASIC1.54□□□□□ -2.16
CDK3Q00526 MIR1252-201ENST00000408861 65 ntBASIC1.54□□□□□ -2.16
CDK3Q00526 RNA5SP511-201ENST00000410487 115 ntBASIC1.54□□□□□ -2.16
CDK3Q00526 RNU2-61P-201ENST00000411069 191 ntBASIC1.54□□□□□ -2.16
CDK3Q00526 AL161935.2-201ENST00000414627 60 ntBASIC1.54□□□□□ -2.16
CDK3Q00526 STAG3L5P-204ENST00000443759 179 ntBASIC1.54□□□□□ -2.16
CDK3Q00526 AC099513.1-201ENST00000490423 301 ntBASIC1.54□□□□□ -2.16
CDK3Q00526 RNU6-1046P-201ENST00000516538 107 ntBASIC1.54□□□□□ -2.16
CDK3Q00526 RNU6-341P-201ENST00000516973 96 ntBASIC1.54□□□□□ -2.16
CDK3Q00526 RNU6-1096P-201ENST00000517089 102 ntBASIC1.54□□□□□ -2.16
CDK3Q00526 AC091178.2-201ENST00000584401 117 ntBASIC1.54□□□□□ -2.16
CDK3Q00526 AC044792.1-201ENST00000593294 196 ntBASIC1.54□□□□□ -2.16
CDK3Q00526 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.54□□□□□ -2.16
CDK3Q00526 Y_RNA.158-201ENST00000363651 101 ntBASIC1.53□□□□□ -2.16
CDK3Q00526 AC117470.1-201ENST00000381974 330 ntBASIC1.53□□□□□ -2.16
CDK3Q00526 RNU6-338P-201ENST00000383888 105 ntBASIC1.53□□□□□ -2.16
CDK3Q00526 MIR520G-201ENST00000385064 90 ntBASIC1.53□□□□□ -2.16
CDK3Q00526 MIR934-201ENST00000401241 83 ntBASIC1.53□□□□□ -2.16
CDK3Q00526 AL034345.1-201ENST00000407768 123 ntBASIC1.53□□□□□ -2.16
CDK3Q00526 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.53□□□□□ -2.16
CDK3Q00526 RNU4-62P-201ENST00000410125 130 ntBASIC1.53□□□□□ -2.16
CDK3Q00526 AC004965.1-201ENST00000413033 213 ntBASIC1.53□□□□□ -2.16
CDK3Q00526 AC005534.2-201ENST00000431047 433 ntBASIC1.53□□□□□ -2.16
CDK3Q00526 AC233266.1-201ENST00000454518 96 ntBASIC1.53□□□□□ -2.16
CDK3Q00526 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.53□□□□□ -2.16
CDK3Q00526 AC015720.1-201ENST00000565251 277 ntBASIC1.53□□□□□ -2.16
CDK3Q00526 AC136932.1-201ENST00000574771 208 ntBASIC1.53□□□□□ -2.16
CDK3Q00526 AL645939.4-201ENST00000604495 135 ntBASIC1.53□□□□□ -2.16
CDK3Q00526 RAC1P9-201ENST00000604990 392 ntBASIC1.53□□□□□ -2.16
CDK3Q00526 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.53□□□□□ -2.16
CDK3Q00526 AC242852.1-201ENST00000612151 96 ntBASIC1.53□□□□□ -2.16
CDK3Q00526 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.53□□□□□ -2.16
CDK3Q00526 AC244015.1-201ENST00000622301 99 ntBASIC1.53□□□□□ -2.16
CDK3Q00526 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CDK3Q00526 SNORA1B-201ENST00000362535 133 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 SNORD81.1-201ENST00000363064 77 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 Y_RNA.172-201ENST00000363765 102 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 RNU4-13P-201ENST00000364019 141 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 RNU1-42P-201ENST00000364033 160 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 Y_RNA.265-201ENST00000364677 108 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 RNU6-60P-201ENST00000364792 103 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 SNORD116-13-201ENST00000384408 92 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 Y_RNA.527-201ENST00000384573 102 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 MIR194-1-201ENST00000384892 85 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 MIR517C-201ENST00000385103 95 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 SNORA67.6-201ENST00000391093 99 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 MIR1323-201ENST00000408090 73 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.52□□□□□ -2.17
CDK3Q00526 MTCYBP6-201ENST00000441810 138 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 RNU6-897P-201ENST00000517135 105 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 AP002004.2-201ENST00000531656 154 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 AL162424.1-201ENST00000602325 221 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 DEFB117-201ENST00000602356 141 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 SNORA28-201ENST00000606769 126 ntBASIC1.52□□□□□ -2.17
CDK3Q00526 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CDK3Q00526 Y_RNA.183-201ENST00000363882 113 ntBASIC1.51□□□□□ -2.17
CDK3Q00526 Y_RNA.380-201ENST00000365663 111 ntBASIC1.51□□□□□ -2.17
CDK3Q00526 RNU6-1227P-201ENST00000383981 107 ntBASIC1.51□□□□□ -2.17
CDK3Q00526 Y_RNA.455-201ENST00000384230 98 ntBASIC1.51□□□□□ -2.17
CDK3Q00526 SNORA12.1-201ENST00000390873 148 ntBASIC1.51□□□□□ -2.17
CDK3Q00526 AL162725.1-201ENST00000435405 301 ntBASIC1.51□□□□□ -2.17
CDK3Q00526 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.51□□□□□ -2.17
CDK3Q00526 SEPT14P8-201ENST00000508026 178 ntBASIC1.51□□□□□ -2.17
CDK3Q00526 MIR4680-201ENST00000580906 66 ntBASIC1.51□□□□□ -2.17
CDK3Q00526 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.51□□□□□ -2.17
CDK3Q00526 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.51□□□□□ -2.17
CDK3Q00526 MIR376A1-201ENST00000616574 68 ntBASIC1.51□□□□□ -2.17
CDK3Q00526 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.51□□□□□ -2.17
CDK3Q00526 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
CDK3Q00526 MIR378A-201ENST00000362177 66 ntBASIC1.5□□□□□ -2.17
CDK3Q00526 MIR126-201ENST00000362291 85 ntBASIC1.5□□□□□ -2.17
CDK3Q00526 RNU4-76P-201ENST00000364509 141 ntBASIC1.5□□□□□ -2.17
CDK3Q00526 RNU6-855P-201ENST00000410395 104 ntBASIC1.5□□□□□ -2.17
CDK3Q00526 RNU6-710P-201ENST00000410424 105 ntBASIC1.5□□□□□ -2.17
CDK3Q00526 RPS4XP11-201ENST00000446897 772 ntBASIC1.5□□□□□ -2.17
CDK3Q00526 AC010655.3-201ENST00000478818 450 ntBASIC1.5□□□□□ -2.17
CDK3Q00526 SNORA31.24-201ENST00000517232 57 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms