Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.71□□□□□ -2.14
LMO4P61968 ATP5EP1-201ENST00000510257 156 ntBASIC1.71□□□□□ -2.14
LMO4P61968 RNA5SP82-201ENST00000516707 92 ntBASIC1.71□□□□□ -2.14
LMO4P61968 RNU6-965P-201ENST00000516721 96 ntBASIC1.71□□□□□ -2.14
LMO4P61968 RNA5SP402-201ENST00000517148 110 ntBASIC1.71□□□□□ -2.14
LMO4P61968 SNORA31.25-201ENST00000517242 134 ntBASIC1.71□□□□□ -2.14
LMO4P61968 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.71□□□□□ -2.14
LMO4P61968 AC136628.3-201ENST00000521868 290 ntBASIC1.71□□□□□ -2.14
LMO4P61968 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.71□□□□□ -2.14
LMO4P61968 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.71□□□□□ -2.14
LMO4P61968 MIR3144-201ENST00000579460 79 ntBASIC1.71□□□□□ -2.14
LMO4P61968 AC022202.1-201ENST00000613515 211 ntBASIC1.71□□□□□ -2.14
LMO4P61968 AL078604.3-201ENST00000615580 211 ntBASIC1.71□□□□□ -2.14
LMO4P61968 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
LMO4P61968 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.7□□□□□ -2.14
LMO4P61968 Y_RNA.8-201ENST00000362353 102 ntBASIC1.7□□□□□ -2.14
LMO4P61968 Y_RNA.398-201ENST00000383952 99 ntBASIC1.7□□□□□ -2.14
LMO4P61968 Y_RNA.412-201ENST00000384001 104 ntBASIC1.7□□□□□ -2.14
LMO4P61968 Y_RNA.441-201ENST00000384123 112 ntBASIC1.7□□□□□ -2.14
LMO4P61968 SNORA72.4-201ENST00000384174 132 ntBASIC1.7□□□□□ -2.14
LMO4P61968 U8.13-201ENST00000390842 128 ntBASIC1.7□□□□□ -2.14
LMO4P61968 RNU6-855P-201ENST00000410395 104 ntBASIC1.7□□□□□ -2.14
LMO4P61968 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.7□□□□□ -2.14
LMO4P61968 AC245102.2-201ENST00000448956 180 ntBASIC1.7□□□□□ -2.14
LMO4P61968 RNU7-14P-201ENST00000459331 62 ntBASIC1.7□□□□□ -2.14
LMO4P61968 RPL23AP42-201ENST00000471152 471 ntBASIC1.7□□□□□ -2.14
LMO4P61968 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.7□□□□□ -2.14
LMO4P61968 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.7□□□□□ -2.14
LMO4P61968 RNU7-200P-201ENST00000516105 62 ntBASIC1.7□□□□□ -2.14
LMO4P61968 RNU6-346P-201ENST00000516288 111 ntBASIC1.7□□□□□ -2.14
LMO4P61968 MIR5002-201ENST00000584713 97 ntBASIC1.7□□□□□ -2.14
LMO4P61968 RNU2-4P-201ENST00000606190 192 ntBASIC1.7□□□□□ -2.14
LMO4P61968 MIR6895-201ENST00000613497 78 ntBASIC1.7□□□□□ -2.14
LMO4P61968 Y_RNA.783-201ENST00000613546 102 ntBASIC1.7□□□□□ -2.14
LMO4P61968 AC013791.1-201ENST00000616619 62 ntBASIC1.7□□□□□ -2.14
LMO4P61968 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
LMO4P61968 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LMO4P61968 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
LMO4P61968 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LMO4P61968 Y_RNA.7-201ENST00000362352 102 ntBASIC1.69□□□□□ -2.14
LMO4P61968 Y_RNA.124-201ENST00000363339 93 ntBASIC1.69□□□□□ -2.14
LMO4P61968 Y_RNA.238-201ENST00000364441 102 ntBASIC1.69□□□□□ -2.14
LMO4P61968 Y_RNA.287-201ENST00000364853 94 ntBASIC1.69□□□□□ -2.14
LMO4P61968 RNU6-234P-201ENST00000365229 104 ntBASIC1.69□□□□□ -2.14
LMO4P61968 Y_RNA.368-201ENST00000365547 113 ntBASIC1.69□□□□□ -2.14
LMO4P61968 RNY1P5-201ENST00000383890 115 ntBASIC1.69□□□□□ -2.14
LMO4P61968 HMGN2P39-201ENST00000398005 273 ntBASIC1.69□□□□□ -2.14
LMO4P61968 MTCO2P33-201ENST00000402100 465 ntBASIC1.69□□□□□ -2.14
LMO4P61968 AL355497.1-201ENST00000406262 551 ntBASIC1.69□□□□□ -2.14
LMO4P61968 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.69□□□□□ -2.14
LMO4P61968 MIR1283-1-201ENST00000408494 87 ntBASIC1.69□□□□□ -2.14
LMO4P61968 MIR1294-201ENST00000408503 142 ntBASIC1.69□□□□□ -2.14
LMO4P61968 RNU6-710P-201ENST00000410424 105 ntBASIC1.69□□□□□ -2.14
LMO4P61968 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.69□□□□□ -2.14
LMO4P61968 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.69□□□□□ -2.14
LMO4P61968 AC108210.2-201ENST00000503681 201 ntBASIC1.69□□□□□ -2.14
LMO4P61968 RNU2-19P-201ENST00000517288 84 ntBASIC1.69□□□□□ -2.14
LMO4P61968 AC025754.2-201ENST00000606491 432 ntBASIC1.69□□□□□ -2.14
LMO4P61968 AL137847.3-201ENST00000611521 109 ntBASIC1.69□□□□□ -2.14
LMO4P61968 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LMO4P61968 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
LMO4P61968 AC134026.1-201ENST00000623249 2239 ntBASIC1.68□□□□□ -2.14
LMO4P61968 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LMO4P61968 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
LMO4P61968 SNORD115-3-201ENST00000363100 82 ntBASIC1.68□□□□□ -2.14
LMO4P61968 Y_RNA.172-201ENST00000363765 102 ntBASIC1.68□□□□□ -2.14
LMO4P61968 RNU6-743P-201ENST00000364151 106 ntBASIC1.68□□□□□ -2.14
LMO4P61968 RNU4-10P-201ENST00000364383 140 ntBASIC1.68□□□□□ -2.14
LMO4P61968 Y_RNA.310-201ENST00000365063 113 ntBASIC1.68□□□□□ -2.14
LMO4P61968 RNU6-1130P-201ENST00000365434 107 ntBASIC1.68□□□□□ -2.14
LMO4P61968 MIR29C-201ENST00000385231 88 ntBASIC1.68□□□□□ -2.14
LMO4P61968 RNU6-381P-201ENST00000391259 108 ntBASIC1.68□□□□□ -2.14
LMO4P61968 AL355796.1-201ENST00000406706 323 ntBASIC1.68□□□□□ -2.14
LMO4P61968 RNU7-57P-201ENST00000459540 60 ntBASIC1.68□□□□□ -2.14
LMO4P61968 AC055731.1-201ENST00000474387 401 ntBASIC1.68□□□□□ -2.14
LMO4P61968 AC104435.1-201ENST00000483483 166 ntBASIC1.68□□□□□ -2.14
LMO4P61968 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.68□□□□□ -2.14
LMO4P61968 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.68□□□□□ -2.14
LMO4P61968 MIR5694-201ENST00000581190 76 ntBASIC1.68□□□□□ -2.14
LMO4P61968 AC108706.1-201ENST00000611053 297 ntBASIC1.68□□□□□ -2.14
LMO4P61968 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.68□□□□□ -2.14
LMO4P61968 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.68□□□□□ -2.14
LMO4P61968 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
LMO4P61968 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.68□□□□□ -2.14
LMO4P61968 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
LMO4P61968 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.67□□□□□ -2.14
LMO4P61968 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.67□□□□□ -2.14
LMO4P61968 MIRLET7G-201ENST00000362280 84 ntBASIC1.67□□□□□ -2.14
LMO4P61968 Y_RNA.121-201ENST00000363309 113 ntBASIC1.67□□□□□ -2.14
LMO4P61968 Y_RNA.182-201ENST00000363880 111 ntBASIC1.67□□□□□ -2.14
LMO4P61968 snoU2_19.4-201ENST00000364329 80 ntBASIC1.67□□□□□ -2.14
LMO4P61968 Y_RNA.341-201ENST00000365341 102 ntBASIC1.67□□□□□ -2.14
LMO4P61968 Y_RNA.456-201ENST00000384232 111 ntBASIC1.67□□□□□ -2.14
LMO4P61968 SNORD14D-201ENST00000384390 87 ntBASIC1.67□□□□□ -2.14
LMO4P61968 MIR300-201ENST00000401138 83 ntBASIC1.67□□□□□ -2.14
LMO4P61968 AC019129.1-201ENST00000403786 261 ntBASIC1.67□□□□□ -2.14
LMO4P61968 RNU2-48P-201ENST00000410694 191 ntBASIC1.67□□□□□ -2.14
LMO4P61968 TMSB4XP3-201ENST00000445144 114 ntBASIC1.67□□□□□ -2.14
LMO4P61968 AC016717.1-201ENST00000448918 286 ntBASIC1.67□□□□□ -2.14
LMO4P61968 RNU7-141P-201ENST00000459304 62 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms