Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
VSX2P58304 SNORD12-201ENST00000391002 90 ntBASIC0.69□□□□□ -2.3
VSX2P58304 MIR548K-201ENST00000408406 116 ntBASIC0.69□□□□□ -2.3
VSX2P58304 MIR548F5-201ENST00000408421 86 ntBASIC0.69□□□□□ -2.3
VSX2P58304 RNU2-64P-201ENST00000411315 191 ntBASIC0.69□□□□□ -2.3
VSX2P58304 AC074085.1-201ENST00000413598 418 ntBASIC0.69□□□□□ -2.3
VSX2P58304 AL606490.4-201ENST00000423117 127 ntBASIC0.69□□□□□ -2.3
VSX2P58304 PIGPP3-201ENST00000425307 415 ntBASIC0.69□□□□□ -2.3
VSX2P58304 RPEP5-201ENST00000441137 268 ntBASIC0.69□□□□□ -2.3
VSX2P58304 MTATP6P26-201ENST00000445926 662 ntBASIC0.69□□□□□ -2.3
VSX2P58304 RNU6-322P-201ENST00000516010 103 ntBASIC0.69□□□□□ -2.3
VSX2P58304 RNU6-197P-201ENST00000516680 100 ntBASIC0.69□□□□□ -2.3
VSX2P58304 RNU6-1096P-201ENST00000517089 102 ntBASIC0.69□□□□□ -2.3
VSX2P58304 MIR4714-201ENST00000580728 77 ntBASIC0.69□□□□□ -2.3
VSX2P58304 AC009229.3-201ENST00000608056 282 ntBASIC0.69□□□□□ -2.3
VSX2P58304 AC093913.1-201ENST00000614178 329 ntBASIC0.69□□□□□ -2.3
VSX2P58304 AC090517.2-201ENST00000614966 680 ntBASIC0.69□□□□□ -2.3
VSX2P58304 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.69□□□□□ -2.3
VSX2P58304 MIR3674-201ENST00000636576 68 ntBASIC0.69□□□□□ -2.3
VSX2P58304 HSBP1P2-201ENST00000299671 229 ntBASIC0.68□□□□□ -2.3
VSX2P58304 MIR410-201ENST00000362222 80 ntBASIC0.68□□□□□ -2.3
VSX2P58304 Y_RNA.86-201ENST00000363020 111 ntBASIC0.68□□□□□ -2.3
VSX2P58304 Y_RNA.243-201ENST00000364481 109 ntBASIC0.68□□□□□ -2.3
VSX2P58304 Y_RNA.339-201ENST00000365325 102 ntBASIC0.68□□□□□ -2.3
VSX2P58304 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
VSX2P58304 RNA5SP475-201ENST00000410568 110 ntBASIC0.68□□□□□ -2.3
VSX2P58304 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.68□□□□□ -2.3
VSX2P58304 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.68□□□□□ -2.3
VSX2P58304 RPS3AP52-201ENST00000435639 297 ntBASIC0.68□□□□□ -2.3
VSX2P58304 MTND3P10-201ENST00000450967 341 ntBASIC0.68□□□□□ -2.3
VSX2P58304 RNU6-625P-201ENST00000459412 107 ntBASIC0.68□□□□□ -2.3
VSX2P58304 AC117454.1-201ENST00000491120 168 ntBASIC0.68□□□□□ -2.3
VSX2P58304 PDCD5P2-201ENST00000507570 312 ntBASIC0.68□□□□□ -2.3
VSX2P58304 AC074133.1-201ENST00000515696 183 ntBASIC0.68□□□□□ -2.3
VSX2P58304 SNORA40.9-201ENST00000515895 93 ntBASIC0.68□□□□□ -2.3
VSX2P58304 RNU6-120P-201ENST00000516077 103 ntBASIC0.68□□□□□ -2.3
VSX2P58304 RNU6-718P-201ENST00000516166 105 ntBASIC0.68□□□□□ -2.3
VSX2P58304 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.68□□□□□ -2.3
VSX2P58304 AC133485.1-201ENST00000567176 124 ntBASIC0.68□□□□□ -2.3
VSX2P58304 AC138907.6-201ENST00000568401 126 ntBASIC0.68□□□□□ -2.3
VSX2P58304 AC018638.8-201ENST00000588755 281 ntBASIC0.68□□□□□ -2.3
VSX2P58304 AC004832.4-201ENST00000608952 331 ntBASIC0.68□□□□□ -2.3
VSX2P58304 RNU6-700P-201ENST00000391043 107 ntBASIC0.67□□□□□ -2.3
VSX2P58304 MIR873-201ENST00000401120 77 ntBASIC0.67□□□□□ -2.3
VSX2P58304 RNA5SP118-201ENST00000410385 109 ntBASIC0.67□□□□□ -2.3
VSX2P58304 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.67□□□□□ -2.3
VSX2P58304 LINC01399-202ENST00000458450 244 ntBASIC0.67□□□□□ -2.3
VSX2P58304 AC069439.1-201ENST00000494739 167 ntBASIC0.67□□□□□ -2.3
VSX2P58304 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.67□□□□□ -2.3
VSX2P58304 PSMC1P5-201ENST00000512850 177 ntBASIC0.67□□□□□ -2.3
VSX2P58304 RNA5SP480-201ENST00000516840 109 ntBASIC0.67□□□□□ -2.3
VSX2P58304 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.67□□□□□ -2.3
VSX2P58304 MIR1244-1-201ENST00000612829 85 ntBASIC0.67□□□□□ -2.3
VSX2P58304 MIR1244-3-201ENST00000635744 85 ntBASIC0.67□□□□□ -2.3
VSX2P58304 MIR1244-2-201ENST00000636449 85 ntBASIC0.67□□□□□ -2.3
VSX2P58304 MIR1244-4-202ENST00000636813 85 ntBASIC0.67□□□□□ -2.3
VSX2P58304 RNU6-833P-201ENST00000363486 107 ntBASIC0.66□□□□□ -2.3
VSX2P58304 Y_RNA.172-201ENST00000363765 102 ntBASIC0.66□□□□□ -2.3
VSX2P58304 RNU6-961P-201ENST00000363893 105 ntBASIC0.66□□□□□ -2.3
VSX2P58304 Y_RNA.573-201ENST00000384763 105 ntBASIC0.66□□□□□ -2.3
VSX2P58304 MIR608-201ENST00000384820 100 ntBASIC0.66□□□□□ -2.3
VSX2P58304 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
VSX2P58304 AL354751.2-201ENST00000415471 210 ntBASIC0.66□□□□□ -2.3
VSX2P58304 AL139396.1-201ENST00000421137 167 ntBASIC0.66□□□□□ -2.3
VSX2P58304 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.66□□□□□ -2.3
VSX2P58304 MTCYBP10-201ENST00000424905 650 ntBASIC0.66□□□□□ -2.3
VSX2P58304 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.66□□□□□ -2.3
VSX2P58304 AC092423.1-201ENST00000430165 186 ntBASIC0.66□□□□□ -2.3
VSX2P58304 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.66□□□□□ -2.3
VSX2P58304 RPL39P39-201ENST00000455840 151 ntBASIC0.66□□□□□ -2.3
VSX2P58304 AC114811.1-201ENST00000507207 168 ntBASIC0.66□□□□□ -2.3
VSX2P58304 SNORA25.10-201ENST00000515926 124 ntBASIC0.66□□□□□ -2.3
VSX2P58304 RNU6-1278P-201ENST00000516130 107 ntBASIC0.66□□□□□ -2.3
VSX2P58304 RNU6-1016P-201ENST00000516689 94 ntBASIC0.66□□□□□ -2.3
VSX2P58304 AC090142.3-201ENST00000519012 385 ntBASIC0.66□□□□□ -2.3
VSX2P58304 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.66□□□□□ -2.3
VSX2P58304 AL357312.1-201ENST00000603879 298 ntBASIC0.66□□□□□ -2.3
VSX2P58304 AL590095.2-201ENST00000604136 117 ntBASIC0.66□□□□□ -2.3
VSX2P58304 AL391903.3-201ENST00000612158 163 ntBASIC0.66□□□□□ -2.3
VSX2P58304 RNU6-1301P-201ENST00000362724 104 ntBASIC0.65□□□□□ -2.31
VSX2P58304 SNORD68-201ENST00000363214 84 ntBASIC0.65□□□□□ -2.31
VSX2P58304 RNU6-1335P-201ENST00000365426 107 ntBASIC0.65□□□□□ -2.31
VSX2P58304 RNU6-163P-201ENST00000384396 106 ntBASIC0.65□□□□□ -2.31
VSX2P58304 MIR562-201ENST00000384894 95 ntBASIC0.65□□□□□ -2.31
VSX2P58304 MIR942-201ENST00000401111 86 ntBASIC0.65□□□□□ -2.31
VSX2P58304 MIR891A-201ENST00000401237 79 ntBASIC0.65□□□□□ -2.31
VSX2P58304 SNORD12B-201ENST00000410433 91 ntBASIC0.65□□□□□ -2.31
VSX2P58304 RNU6-1132P-201ENST00000459214 107 ntBASIC0.65□□□□□ -2.31
VSX2P58304 RNU6-408P-201ENST00000515910 100 ntBASIC0.65□□□□□ -2.31
VSX2P58304 RNU6-1213P-201ENST00000517075 94 ntBASIC0.65□□□□□ -2.31
VSX2P58304 MIR3684-201ENST00000579779 74 ntBASIC0.65□□□□□ -2.31
VSX2P58304 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.65□□□□□ -2.31
VSX2P58304 AC093783.1-201ENST00000612976 329 ntBASIC0.65□□□□□ -2.31
VSX2P58304 AC004467.1-201ENST00000615678 330 ntBASIC0.65□□□□□ -2.31
VSX2P58304 RNU6-623P-201ENST00000363143 105 ntBASIC0.64□□□□□ -2.31
VSX2P58304 SNORD114-26-201ENST00000363543 72 ntBASIC0.64□□□□□ -2.31
VSX2P58304 SNORD116-13-201ENST00000384408 92 ntBASIC0.64□□□□□ -2.31
VSX2P58304 SNORD116-4-201ENST00000384733 96 ntBASIC0.64□□□□□ -2.31
VSX2P58304 RNU6-1105P-201ENST00000384774 107 ntBASIC0.64□□□□□ -2.31
VSX2P58304 MIR1298-201ENST00000408783 112 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms