Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TRBVB-201ENST00000477100 408 ntBASIC1.72□□□□□ -2.13
CLDN20P56880 MRPS17P9-201ENST00000511924 393 ntBASIC1.72□□□□□ -2.13
CLDN20P56880 RNU2-31P-201ENST00000516954 155 ntBASIC1.72□□□□□ -2.13
CLDN20P56880 RNU6-570P-201ENST00000517051 105 ntBASIC1.72□□□□□ -2.13
CLDN20P56880 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.72□□□□□ -2.13
CLDN20P56880 AC110588.1-201ENST00000559699 137 ntBASIC1.72□□□□□ -2.13
CLDN20P56880 MIR6715A-201ENST00000615929 79 ntBASIC1.72□□□□□ -2.13
CLDN20P56880 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.72□□□□□ -2.13
CLDN20P56880 MIR6079-201ENST00000635807 62 ntBASIC1.72□□□□□ -2.13
CLDN20P56880 ZNF355P-201ENST00000427301 3216 ntBASIC1.72□□□□□ -2.13
CLDN20P56880 AC018630.2-201ENST00000534866 2403 ntBASIC1.72□□□□□ -2.13
CLDN20P56880 RNU4-80P-201ENST00000363200 141 ntBASIC1.71□□□□□ -2.14
CLDN20P56880 Y_RNA.368-201ENST00000365547 113 ntBASIC1.71□□□□□ -2.14
CLDN20P56880 Y_RNA.461-201ENST00000384263 103 ntBASIC1.71□□□□□ -2.14
CLDN20P56880 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CLDN20P56880 U8.13-201ENST00000390842 128 ntBASIC1.71□□□□□ -2.14
CLDN20P56880 MIR1302-3-201ENST00000408128 138 ntBASIC1.71□□□□□ -2.14
CLDN20P56880 RNU2-7P-201ENST00000410794 178 ntBASIC1.71□□□□□ -2.14
CLDN20P56880 AC003989.2-201ENST00000440224 169 ntBASIC1.71□□□□□ -2.14
CLDN20P56880 RPL23AP6-201ENST00000446637 472 ntBASIC1.71□□□□□ -2.14
CLDN20P56880 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.71□□□□□ -2.14
CLDN20P56880 RPL36AP21-201ENST00000490372 323 ntBASIC1.71□□□□□ -2.14
CLDN20P56880 RNU6-63P-201ENST00000516690 95 ntBASIC1.71□□□□□ -2.14
CLDN20P56880 MIR4299-201ENST00000577899 72 ntBASIC1.71□□□□□ -2.14
CLDN20P56880 AL162730.1-201ENST00000605734 292 ntBASIC1.71□□□□□ -2.14
CLDN20P56880 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.71□□□□□ -2.14
CLDN20P56880 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CLDN20P56880 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CLDN20P56880 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
CLDN20P56880 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CLDN20P56880 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CLDN20P56880 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CLDN20P56880 Y_RNA.310-201ENST00000365063 113 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 Y_RNA.341-201ENST00000365341 102 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 Y_RNA.456-201ENST00000384232 111 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 MIR562-201ENST00000384894 95 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 MIR520G-201ENST00000385064 90 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 MIR676-201ENST00000390702 67 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 SNORA40.18-201ENST00000391200 128 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 MIR1302-6-201ENST00000408466 90 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.7□□□□□ -2.14
CLDN20P56880 MTCO1P5-201ENST00000433573 344 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 AL162725.1-201ENST00000435405 301 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 RPS27P1-201ENST00000450552 247 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 RNU6-1338P-201ENST00000516328 91 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 RNA5SP481-201ENST00000516814 122 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 SNORA31.17-201ENST00000516953 127 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 RNA5SP437-201ENST00000517249 129 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CLDN20P56880 AL161670.1-201ENST00000554348 137 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 AC022254.1-201ENST00000567857 235 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.7□□□□□ -2.14
CLDN20P56880 AC091178.2-201ENST00000584401 117 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 AC022217.4-201ENST00000604389 163 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 AC004832.4-201ENST00000608952 331 ntBASIC1.7□□□□□ -2.14
CLDN20P56880 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CLDN20P56880 SNORA25.1-201ENST00000362326 128 ntBASIC1.69□□□□□ -2.14
CLDN20P56880 Y_RNA.16-201ENST00000362421 102 ntBASIC1.69□□□□□ -2.14
CLDN20P56880 Y_RNA.172-201ENST00000363765 102 ntBASIC1.69□□□□□ -2.14
CLDN20P56880 RNU6-514P-201ENST00000384208 107 ntBASIC1.69□□□□□ -2.14
CLDN20P56880 SNORD116-13-201ENST00000384408 92 ntBASIC1.69□□□□□ -2.14
CLDN20P56880 MIR583-201ENST00000384846 75 ntBASIC1.69□□□□□ -2.14
CLDN20P56880 MIR504-201ENST00000385065 83 ntBASIC1.69□□□□□ -2.14
CLDN20P56880 RNA5SP109-201ENST00000391010 116 ntBASIC1.69□□□□□ -2.14
CLDN20P56880 snosnR66.1-201ENST00000391095 99 ntBASIC1.69□□□□□ -2.14
CLDN20P56880 RNA5SP511-201ENST00000410487 115 ntBASIC1.69□□□□□ -2.14
CLDN20P56880 AL606517.2-201ENST00000442855 241 ntBASIC1.69□□□□□ -2.14
CLDN20P56880 RPS20P10-201ENST00000451209 253 ntBASIC1.69□□□□□ -2.14
CLDN20P56880 RPL23AP63-201ENST00000498752 471 ntBASIC1.69□□□□□ -2.14
CLDN20P56880 RNU6-191P-201ENST00000516295 94 ntBASIC1.69□□□□□ -2.14
CLDN20P56880 AC015720.1-201ENST00000565251 277 ntBASIC1.69□□□□□ -2.14
CLDN20P56880 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.69□□□□□ -2.14
CLDN20P56880 MIR4713-201ENST00000582691 75 ntBASIC1.69□□□□□ -2.14
CLDN20P56880 MIR6845-201ENST00000613182 61 ntBASIC1.69□□□□□ -2.14
CLDN20P56880 AP001282.2-201ENST00000616149 309 ntBASIC1.69□□□□□ -2.14
CLDN20P56880 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.69□□□□□ -2.14
CLDN20P56880 RNU4-13P-201ENST00000364019 141 ntBASIC1.68□□□□□ -2.14
CLDN20P56880 RNU6-472P-201ENST00000384299 107 ntBASIC1.68□□□□□ -2.14
CLDN20P56880 Y_RNA.518-201ENST00000384552 113 ntBASIC1.68□□□□□ -2.14
CLDN20P56880 RNU6-950P-201ENST00000384651 107 ntBASIC1.68□□□□□ -2.14
CLDN20P56880 Y_RNA.556-201ENST00000384677 113 ntBASIC1.68□□□□□ -2.14
CLDN20P56880 MIR568-201ENST00000385036 95 ntBASIC1.68□□□□□ -2.14
CLDN20P56880 MT-TW-201ENST00000387382 68 ntBASIC1.68□□□□□ -2.14
CLDN20P56880 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.68□□□□□ -2.14
CLDN20P56880 AC245047.3-201ENST00000429428 127 ntBASIC1.68□□□□□ -2.14
CLDN20P56880 AC091021.1-201ENST00000468051 388 ntBASIC1.68□□□□□ -2.14
CLDN20P56880 SERF1AP1-201ENST00000514575 187 ntBASIC1.68□□□□□ -2.14
CLDN20P56880 RNA5SP182-201ENST00000516064 82 ntBASIC1.68□□□□□ -2.14
CLDN20P56880 RNU6-295P-201ENST00000516901 104 ntBASIC1.68□□□□□ -2.14
CLDN20P56880 RNU6-341P-201ENST00000516973 96 ntBASIC1.68□□□□□ -2.14
CLDN20P56880 AC104984.5-201ENST00000586878 94 ntBASIC1.68□□□□□ -2.14
CLDN20P56880 AC005972.2-201ENST00000604690 348 ntBASIC1.68□□□□□ -2.14
CLDN20P56880 MIR7843-201ENST00000622274 79 ntBASIC1.68□□□□□ -2.14
CLDN20P56880 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CLDN20P56880 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
CLDN20P56880 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CLDN20P56880 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLDN20P56880 AL391987.6-201ENST00000305671 199 ntBASIC1.67□□□□□ -2.14
CLDN20P56880 MIR335-201ENST00000362173 94 ntBASIC1.67□□□□□ -2.14
CLDN20P56880 Y_RNA.396-201ENST00000383949 103 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms