Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RN7SL633P-201ENST00000488974 297 ntBASIC2.64□□□□□ -1.99
GFRA1P56159 Y_RNA.714-201ENST00000517065 90 ntBASIC2.64□□□□□ -1.99
GFRA1P56159 AL160236.1-201ENST00000556317 195 ntBASIC2.64□□□□□ -1.99
GFRA1P56159 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.64□□□□□ -1.99
GFRA1P56159 MIR3646-201ENST00000578301 84 ntBASIC2.64□□□□□ -1.99
GFRA1P56159 MIR4662B-201ENST00000579498 81 ntBASIC2.64□□□□□ -1.99
GFRA1P56159 MIR378D2-201ENST00000580636 98 ntBASIC2.64□□□□□ -1.99
GFRA1P56159 MIR4506-201ENST00000584693 77 ntBASIC2.64□□□□□ -1.99
GFRA1P56159 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.64□□□□□ -1.99
GFRA1P56159 AC008264.2-201ENST00000610193 3731 ntBASIC2.64□□□□□ -1.99
GFRA1P56159 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
GFRA1P56159 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
GFRA1P56159 SNORA80A-201ENST00000363922 136 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 Y_RNA.253-201ENST00000364562 112 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 Y_RNA.393-201ENST00000383936 102 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 Y_RNA.568-201ENST00000384742 113 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 RPL30P13-201ENST00000418873 348 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 UQCRHP3-201ENST00000451503 251 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 TRBV12-1-201ENST00000479785 344 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 OR9P1P-201ENST00000496431 281 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 SCGB1D5P-201ENST00000515134 247 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 RNA5SP153-201ENST00000516498 76 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 RNU2-56P-201ENST00000516826 190 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 AC069114.2-201ENST00000604699 304 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 AC006386.2-201ENST00000624491 75 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 AC091895.1-201ENST00000624494 256 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 AC012005.1-201ENST00000624575 75 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 AL137790.1-201ENST00000634283 177 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 MIR6844-201ENST00000637122 62 ntBASIC2.63□□□□□ -1.99
GFRA1P56159 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
GFRA1P56159 MAPK10-266ENST00000641066 6555 ntBASIC2.62□□□□□ -1.99
GFRA1P56159 AL365361.1-201ENST00000566942 3481 ntBASIC2.62□□□□□ -1.99
GFRA1P56159 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
GFRA1P56159 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
GFRA1P56159 RNU6-818P-201ENST00000364837 108 ntBASIC2.62□□□□□ -1.99
GFRA1P56159 RNU6-768P-201ENST00000384683 107 ntBASIC2.62□□□□□ -1.99
GFRA1P56159 MIR634-201ENST00000385208 97 ntBASIC2.62□□□□□ -1.99
GFRA1P56159 MIR569-201ENST00000385228 96 ntBASIC2.62□□□□□ -1.99
GFRA1P56159 RNU6-131P-201ENST00000391144 107 ntBASIC2.62□□□□□ -1.99
GFRA1P56159 AL135938.1-201ENST00000443141 297 ntBASIC2.62□□□□□ -1.99
GFRA1P56159 RN7SKP43-201ENST00000516173 320 ntBASIC2.62□□□□□ -1.99
GFRA1P56159 RNU6-426P-201ENST00000516464 97 ntBASIC2.62□□□□□ -1.99
GFRA1P56159 RNU7-149P-201ENST00000516739 59 ntBASIC2.62□□□□□ -1.99
GFRA1P56159 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.62□□□□□ -1.99
GFRA1P56159 AC112693.2-201ENST00000556538 232 ntBASIC2.62□□□□□ -1.99
GFRA1P56159 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.62□□□□□ -1.99
GFRA1P56159 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.62□□□□□ -1.99
GFRA1P56159 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
GFRA1P56159 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.61□□□□□ -1.99
GFRA1P56159 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
GFRA1P56159 SNORA1B-201ENST00000362535 133 ntBASIC2.61□□□□□ -1.99
GFRA1P56159 RNU6-1138P-201ENST00000365359 106 ntBASIC2.61□□□□□ -1.99
GFRA1P56159 RNU11-3P-201ENST00000391111 133 ntBASIC2.61□□□□□ -1.99
GFRA1P56159 RPL21P3-201ENST00000395517 478 ntBASIC2.61□□□□□ -1.99
GFRA1P56159 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.61□□□□□ -1.99
GFRA1P56159 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.61□□□□□ -1.99
GFRA1P56159 AL049830.1-201ENST00000468034 425 ntBASIC2.61□□□□□ -1.99
GFRA1P56159 SNORA25.12-201ENST00000516202 82 ntBASIC2.61□□□□□ -1.99
GFRA1P56159 SCARNA13-201ENST00000516672 275 ntBASIC2.61□□□□□ -1.99
GFRA1P56159 Pinc.1-201ENST00000616452 154 ntBASIC2.61□□□□□ -1.99
GFRA1P56159 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
GFRA1P56159 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
GFRA1P56159 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
GFRA1P56159 ZNF702P-202ENST00000434269 1966 ntBASIC2.6□□□□□ -1.99
GFRA1P56159 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.6□□□□□ -1.99
GFRA1P56159 MIR126-201ENST00000362291 85 ntBASIC2.6□□□□□ -1.99
GFRA1P56159 Y_RNA.242-201ENST00000364473 110 ntBASIC2.6□□□□□ -1.99
GFRA1P56159 RN7SKP123-201ENST00000410732 291 ntBASIC2.6□□□□□ -1.99
GFRA1P56159 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.6□□□□□ -1.99
GFRA1P56159 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.6□□□□□ -1.99
GFRA1P56159 RN7SL297P-201ENST00000483161 293 ntBASIC2.6□□□□□ -1.99
GFRA1P56159 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.6□□□□□ -1.99
GFRA1P56159 AC022513.1-201ENST00000624512 117 ntBASIC2.6□□□□□ -1.99
GFRA1P56159 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.6□□□□□ -1.99
GFRA1P56159 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
GFRA1P56159 RNU6-597P-201ENST00000365620 102 ntBASIC2.59□□□□□ -1.99
GFRA1P56159 RNA5SP465-201ENST00000391195 109 ntBASIC2.59□□□□□ -1.99
GFRA1P56159 SNORA75.5-201ENST00000391291 81 ntBASIC2.59□□□□□ -1.99
GFRA1P56159 MLLT10P1-201ENST00000418346 262 ntBASIC2.59□□□□□ -1.99
GFRA1P56159 AL606753.1-201ENST00000427435 87 ntBASIC2.59□□□□□ -1.99
GFRA1P56159 AC245047.3-201ENST00000429428 127 ntBASIC2.59□□□□□ -1.99
GFRA1P56159 RNA5SP367-201ENST00000516557 118 ntBASIC2.59□□□□□ -1.99
GFRA1P56159 MIR7106-201ENST00000612419 65 ntBASIC2.59□□□□□ -1.99
GFRA1P56159 AL591926.4-201ENST00000616895 298 ntBASIC2.59□□□□□ -1.99
GFRA1P56159 CTSLP2-204ENST00000629029 392 ntBASIC2.59□□□□□ -1.99
GFRA1P56159 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.59□□□□□ -1.99
GFRA1P56159 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
GFRA1P56159 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.59□□□□□ -2
GFRA1P56159 AC093831.2-201ENST00000624393 3427 ntBASIC2.58□□□□□ -2
GFRA1P56159 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.58□□□□□ -2
GFRA1P56159 RNU6-1019P-201ENST00000364424 107 ntBASIC2.58□□□□□ -2
GFRA1P56159 Y_RNA.634-201ENST00000364811 113 ntBASIC2.58□□□□□ -2
GFRA1P56159 SNORD113-1-201ENST00000365321 69 ntBASIC2.58□□□□□ -2
GFRA1P56159 MIR597-201ENST00000384968 97 ntBASIC2.58□□□□□ -2
GFRA1P56159 SNORA12.1-201ENST00000390873 148 ntBASIC2.58□□□□□ -2
GFRA1P56159 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.58□□□□□ -2
GFRA1P56159 AC069257.2-201ENST00000441819 155 ntBASIC2.58□□□□□ -2
GFRA1P56159 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms