Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC040896.1-201ENST00000613819 479 ntBASIC1.48□□□□□ -2.17
CDH13P55290 AC134503.1-201ENST00000633048 54 ntBASIC1.48□□□□□ -2.17
CDH13P55290 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CDH13P55290 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CDH13P55290 Y_RNA.31-201ENST00000362574 102 ntBASIC1.47□□□□□ -2.17
CDH13P55290 RNU6-324P-201ENST00000363957 106 ntBASIC1.47□□□□□ -2.17
CDH13P55290 Y_RNA.265-201ENST00000364677 108 ntBASIC1.47□□□□□ -2.17
CDH13P55290 Y_RNA.267-201ENST00000364679 109 ntBASIC1.47□□□□□ -2.17
CDH13P55290 RNU6-474P-201ENST00000384243 107 ntBASIC1.47□□□□□ -2.17
CDH13P55290 Y_RNA.471-201ENST00000384312 102 ntBASIC1.47□□□□□ -2.17
CDH13P55290 Y_RNA.551-201ENST00000384661 102 ntBASIC1.47□□□□□ -2.17
CDH13P55290 RNA5SP511-201ENST00000410487 115 ntBASIC1.47□□□□□ -2.17
CDH13P55290 MTND1P14-201ENST00000427400 950 ntBASIC1.47□□□□□ -2.17
CDH13P55290 STAG3L5P-204ENST00000443759 179 ntBASIC1.47□□□□□ -2.17
CDH13P55290 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.47□□□□□ -2.17
CDH13P55290 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.47□□□□□ -2.17
CDH13P55290 RNU6-966P-201ENST00000516479 104 ntBASIC1.47□□□□□ -2.17
CDH13P55290 AC022616.4-201ENST00000522985 181 ntBASIC1.47□□□□□ -2.17
CDH13P55290 AC011373.1-201ENST00000607270 237 ntBASIC1.47□□□□□ -2.17
CDH13P55290 Y_RNA.813-201ENST00000364639 102 ntBASIC1.46□□□□□ -2.18
CDH13P55290 RNU6-1065P-201ENST00000384513 106 ntBASIC1.46□□□□□ -2.18
CDH13P55290 MIR660-201ENST00000385235 97 ntBASIC1.46□□□□□ -2.18
CDH13P55290 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.46□□□□□ -2.18
CDH13P55290 AL354751.2-201ENST00000415471 210 ntBASIC1.46□□□□□ -2.18
CDH13P55290 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.46□□□□□ -2.18
CDH13P55290 snoU13.23-201ENST00000458863 104 ntBASIC1.46□□□□□ -2.18
CDH13P55290 AL049830.1-201ENST00000468034 425 ntBASIC1.46□□□□□ -2.18
CDH13P55290 RNU6-1291P-201ENST00000516591 104 ntBASIC1.46□□□□□ -2.18
CDH13P55290 RNU6-63P-201ENST00000516690 95 ntBASIC1.46□□□□□ -2.18
CDH13P55290 Y_RNA.721-201ENST00000517207 102 ntBASIC1.46□□□□□ -2.18
CDH13P55290 RNU6-988P-201ENST00000519081 107 ntBASIC1.46□□□□□ -2.18
CDH13P55290 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
CDH13P55290 MTND4P29-201ENST00000503122 1372 ntBASIC1.46□□□□□ -2.18
CDH13P55290 Y_RNA.329-201ENST00000365209 107 ntBASIC1.45□□□□□ -2.18
CDH13P55290 Y_RNA.331-201ENST00000365267 102 ntBASIC1.45□□□□□ -2.18
CDH13P55290 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.45□□□□□ -2.18
CDH13P55290 RNU6-308P-201ENST00000390957 107 ntBASIC1.45□□□□□ -2.18
CDH13P55290 RN7SKP51-201ENST00000410781 304 ntBASIC1.45□□□□□ -2.18
CDH13P55290 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.45□□□□□ -2.18
CDH13P55290 SNX2P2-201ENST00000424553 323 ntBASIC1.45□□□□□ -2.18
CDH13P55290 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.45□□□□□ -2.18
CDH13P55290 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.45□□□□□ -2.18
CDH13P55290 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.45□□□□□ -2.18
CDH13P55290 OR9P1P-201ENST00000496431 281 ntBASIC1.45□□□□□ -2.18
CDH13P55290 MIR3683-201ENST00000580847 82 ntBASIC1.45□□□□□ -2.18
CDH13P55290 AL121890.5-201ENST00000620848 304 ntBASIC1.45□□□□□ -2.18
CDH13P55290 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.45□□□□□ -2.18
CDH13P55290 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.45□□□□□ -2.18
CDH13P55290 AP000648.3-201ENST00000623539 4507 ntBASIC1.45□□□□□ -2.18
CDH13P55290 Y_RNA.148-201ENST00000363557 117 ntBASIC1.44□□□□□ -2.18
CDH13P55290 RNA5SP259-201ENST00000365541 109 ntBASIC1.44□□□□□ -2.18
CDH13P55290 RNU6-424P-201ENST00000384367 105 ntBASIC1.44□□□□□ -2.18
CDH13P55290 Y_RNA.645-201ENST00000391229 102 ntBASIC1.44□□□□□ -2.18
CDH13P55290 AC024067.1-201ENST00000426199 223 ntBASIC1.44□□□□□ -2.18
CDH13P55290 RNU1-98P-201ENST00000458992 160 ntBASIC1.44□□□□□ -2.18
CDH13P55290 AC108210.2-201ENST00000503681 201 ntBASIC1.44□□□□□ -2.18
CDH13P55290 RNU7-110P-201ENST00000516891 62 ntBASIC1.44□□□□□ -2.18
CDH13P55290 MIR3937-201ENST00000580135 106 ntBASIC1.44□□□□□ -2.18
CDH13P55290 SNORD3E-202ENST00000627253 216 ntBASIC1.44□□□□□ -2.18
CDH13P55290 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.44□□□□□ -2.18
CDH13P55290 SNORD81.1-201ENST00000363064 77 ntBASIC1.43□□□□□ -2.18
CDH13P55290 Y_RNA.143-201ENST00000363520 106 ntBASIC1.43□□□□□ -2.18
CDH13P55290 RNU4-13P-201ENST00000364019 141 ntBASIC1.43□□□□□ -2.18
CDH13P55290 RNA5SP190-201ENST00000365222 118 ntBASIC1.43□□□□□ -2.18
CDH13P55290 AC117470.1-201ENST00000381974 330 ntBASIC1.43□□□□□ -2.18
CDH13P55290 RNU6-136P-201ENST00000384663 107 ntBASIC1.43□□□□□ -2.18
CDH13P55290 MIR517C-201ENST00000385103 95 ntBASIC1.43□□□□□ -2.18
CDH13P55290 RNU6-130P-201ENST00000411112 103 ntBASIC1.43□□□□□ -2.18
CDH13P55290 RPS27P16-201ENST00000425758 201 ntBASIC1.43□□□□□ -2.18
CDH13P55290 RPS4XP11-201ENST00000446897 772 ntBASIC1.43□□□□□ -2.18
CDH13P55290 AC233266.1-201ENST00000454518 96 ntBASIC1.43□□□□□ -2.18
CDH13P55290 U8.19-201ENST00000459095 133 ntBASIC1.43□□□□□ -2.18
CDH13P55290 RNA5SP168-201ENST00000516642 112 ntBASIC1.43□□□□□ -2.18
CDH13P55290 SUMO2P16-201ENST00000519475 264 ntBASIC1.43□□□□□ -2.18
CDH13P55290 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.43□□□□□ -2.18
CDH13P55290 AC015712.3-201ENST00000559380 164 ntBASIC1.43□□□□□ -2.18
CDH13P55290 AC124312.5-201ENST00000604451 268 ntBASIC1.43□□□□□ -2.18
CDH13P55290 PART1_1.1-201ENST00000611761 217 ntBASIC1.43□□□□□ -2.18
CDH13P55290 AC242852.1-201ENST00000612151 96 ntBASIC1.43□□□□□ -2.18
CDH13P55290 AC244015.1-201ENST00000622301 99 ntBASIC1.43□□□□□ -2.18
CDH13P55290 RNU1-42P-201ENST00000364033 160 ntBASIC1.42□□□□□ -2.18
CDH13P55290 Y_RNA.394-201ENST00000383942 103 ntBASIC1.42□□□□□ -2.18
CDH13P55290 RNU6-937P-201ENST00000384325 106 ntBASIC1.42□□□□□ -2.18
CDH13P55290 SNORD116-13-201ENST00000384408 92 ntBASIC1.42□□□□□ -2.18
CDH13P55290 MIR764-201ENST00000390811 85 ntBASIC1.42□□□□□ -2.18
CDH13P55290 RNU6-823P-201ENST00000391042 103 ntBASIC1.42□□□□□ -2.18
CDH13P55290 MIR548P-201ENST00000408336 84 ntBASIC1.42□□□□□ -2.18
CDH13P55290 MTCO2P12-201ENST00000427426 682 ntBASIC1.42□□□□□ -2.18
CDH13P55290 AL354695.1-201ENST00000427935 228 ntBASIC1.42□□□□□ -2.18
CDH13P55290 RPS20P10-201ENST00000451209 253 ntBASIC1.42□□□□□ -2.18
CDH13P55290 SNORD13-201ENST00000459299 104 ntBASIC1.42□□□□□ -2.18
CDH13P55290 RPL39P38-201ENST00000467018 153 ntBASIC1.42□□□□□ -2.18
CDH13P55290 SEPT14P8-201ENST00000508026 178 ntBASIC1.42□□□□□ -2.18
CDH13P55290 RNA5SP61-201ENST00000516453 100 ntBASIC1.42□□□□□ -2.18
CDH13P55290 Y_RNA.711-201ENST00000516993 102 ntBASIC1.42□□□□□ -2.18
CDH13P55290 Y_RNA.715-201ENST00000517082 110 ntBASIC1.42□□□□□ -2.18
CDH13P55290 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.42□□□□□ -2.18
CDH13P55290 AC005972.2-201ENST00000604690 348 ntBASIC1.42□□□□□ -2.18
CDH13P55290 SNORD113-5-201ENST00000607261 78 ntBASIC1.42□□□□□ -2.18
CDH13P55290 AL365434.2-201ENST00000607979 234 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms