Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 U8.7-201ENST00000364940 136 ntBASIC1.91□□□□□ -2.1
CDH12P55289 RNU6-1318P-201ENST00000365389 103 ntBASIC1.91□□□□□ -2.1
CDH12P55289 SNORA8-201ENST00000384574 139 ntBASIC1.91□□□□□ -2.1
CDH12P55289 RNU6-376P-201ENST00000384731 106 ntBASIC1.91□□□□□ -2.1
CDH12P55289 RNA5SP501-201ENST00000410990 112 ntBASIC1.91□□□□□ -2.1
CDH12P55289 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.91□□□□□ -2.1
CDH12P55289 RNU7-141P-201ENST00000459304 62 ntBASIC1.91□□□□□ -2.1
CDH12P55289 RPS27P21-201ENST00000486977 252 ntBASIC1.91□□□□□ -2.1
CDH12P55289 RPL36AP21-201ENST00000490372 323 ntBASIC1.91□□□□□ -2.1
CDH12P55289 AL163195.1-201ENST00000496941 348 ntBASIC1.91□□□□□ -2.1
CDH12P55289 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.91□□□□□ -2.1
CDH12P55289 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.91□□□□□ -2.1
CDH12P55289 RNA5SP364-201ENST00000516938 78 ntBASIC1.91□□□□□ -2.1
CDH12P55289 MIR5094-201ENST00000578766 85 ntBASIC1.91□□□□□ -2.1
CDH12P55289 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.91□□□□□ -2.1
CDH12P55289 AC141273.2-201ENST00000618989 130 ntBASIC1.91□□□□□ -2.1
CDH12P55289 SCARNA15.3-201ENST00000626315 122 ntBASIC1.91□□□□□ -2.1
CDH12P55289 SCARNA4.1-201ENST00000628597 123 ntBASIC1.91□□□□□ -2.1
CDH12P55289 AC068647.2-201ENST00000637380 353 ntBASIC1.91□□□□□ -2.1
CDH12P55289 Y_RNA.552-201ENST00000384665 112 ntBASIC1.9□□□□□ -2.11
CDH12P55289 MIR515-2-201ENST00000384883 83 ntBASIC1.9□□□□□ -2.11
CDH12P55289 MIR515-1-201ENST00000384884 83 ntBASIC1.9□□□□□ -2.11
CDH12P55289 MIR634-201ENST00000385208 97 ntBASIC1.9□□□□□ -2.11
CDH12P55289 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CDH12P55289 SNORA48.1-201ENST00000390879 135 ntBASIC1.9□□□□□ -2.11
CDH12P55289 RNA5SP323-201ENST00000391094 133 ntBASIC1.9□□□□□ -2.11
CDH12P55289 MTCO2P33-201ENST00000402100 465 ntBASIC1.9□□□□□ -2.11
CDH12P55289 SNORD23.1-201ENST00000408212 104 ntBASIC1.9□□□□□ -2.11
CDH12P55289 AL356379.1-201ENST00000414105 126 ntBASIC1.9□□□□□ -2.11
CDH12P55289 AL135786.1-201ENST00000415892 214 ntBASIC1.9□□□□□ -2.11
CDH12P55289 AC010154.1-201ENST00000425857 269 ntBASIC1.9□□□□□ -2.11
CDH12P55289 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.9□□□□□ -2.11
CDH12P55289 AC245047.4-201ENST00000433189 144 ntBASIC1.9□□□□□ -2.11
CDH12P55289 HSPE1P21-201ENST00000438283 308 ntBASIC1.9□□□□□ -2.11
CDH12P55289 RPS26P45-201ENST00000471748 340 ntBASIC1.9□□□□□ -2.11
CDH12P55289 TRBV12-1-201ENST00000479785 344 ntBASIC1.9□□□□□ -2.11
CDH12P55289 AC117454.1-201ENST00000491120 168 ntBASIC1.9□□□□□ -2.11
CDH12P55289 RNU4-71P-201ENST00000516258 113 ntBASIC1.9□□□□□ -2.11
CDH12P55289 Y_RNA.679-201ENST00000516416 91 ntBASIC1.9□□□□□ -2.11
CDH12P55289 RNU1-142P-201ENST00000516682 145 ntBASIC1.9□□□□□ -2.11
CDH12P55289 AC005972.2-201ENST00000604690 348 ntBASIC1.9□□□□□ -2.11
CDH12P55289 AL442067.1-201ENST00000613261 223 ntBASIC1.9□□□□□ -2.11
CDH12P55289 MIR6873-201ENST00000622788 63 ntBASIC1.9□□□□□ -2.11
CDH12P55289 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDH12P55289 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.89□□□□□ -2.11
CDH12P55289 Y_RNA.257-201ENST00000364596 102 ntBASIC1.89□□□□□ -2.11
CDH12P55289 Y_RNA.292-201ENST00000364904 97 ntBASIC1.89□□□□□ -2.11
CDH12P55289 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CDH12P55289 RNU2-40P-201ENST00000410833 196 ntBASIC1.89□□□□□ -2.11
CDH12P55289 HMGN2P38-201ENST00000423806 265 ntBASIC1.89□□□□□ -2.11
CDH12P55289 AL606517.2-201ENST00000442855 241 ntBASIC1.89□□□□□ -2.11
CDH12P55289 RPS4XP11-201ENST00000446897 772 ntBASIC1.89□□□□□ -2.11
CDH12P55289 Y_RNA.638-201ENST00000459374 113 ntBASIC1.89□□□□□ -2.11
CDH12P55289 AC091021.1-201ENST00000468051 388 ntBASIC1.89□□□□□ -2.11
CDH12P55289 AC055731.1-201ENST00000474387 401 ntBASIC1.89□□□□□ -2.11
CDH12P55289 RNU7-115P-201ENST00000516433 55 ntBASIC1.89□□□□□ -2.11
CDH12P55289 RNU2-19P-201ENST00000517288 84 ntBASIC1.89□□□□□ -2.11
CDH12P55289 AC024995.1-201ENST00000523014 93 ntBASIC1.89□□□□□ -2.11
CDH12P55289 AC084364.2-201ENST00000546924 395 ntBASIC1.89□□□□□ -2.11
CDH12P55289 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.89□□□□□ -2.11
CDH12P55289 MIR4529-201ENST00000578110 78 ntBASIC1.89□□□□□ -2.11
CDH12P55289 AC091178.2-201ENST00000584401 117 ntBASIC1.89□□□□□ -2.11
CDH12P55289 AC009779.6-201ENST00000603972 165 ntBASIC1.89□□□□□ -2.11
CDH12P55289 AC013791.1-201ENST00000616619 62 ntBASIC1.89□□□□□ -2.11
CDH12P55289 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.89□□□□□ -2.11
CDH12P55289 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
CDH12P55289 RNU4-82P-201ENST00000362443 140 ntBASIC1.88□□□□□ -2.11
CDH12P55289 SNORA16B-201ENST00000364674 135 ntBASIC1.88□□□□□ -2.11
CDH12P55289 RNY4P28-201ENST00000365281 93 ntBASIC1.88□□□□□ -2.11
CDH12P55289 RNU6-1323P-201ENST00000384025 107 ntBASIC1.88□□□□□ -2.11
CDH12P55289 AL139156.1-201ENST00000412785 841 ntBASIC1.88□□□□□ -2.11
CDH12P55289 AC108059.2-201ENST00000434626 151 ntBASIC1.88□□□□□ -2.11
CDH12P55289 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.88□□□□□ -2.11
CDH12P55289 AC024405.2-202ENST00000532731 184 ntBASIC1.88□□□□□ -2.11
CDH12P55289 MIR5692C2-201ENST00000577959 77 ntBASIC1.88□□□□□ -2.11
CDH12P55289 AP003357.1-201ENST00000604497 148 ntBASIC1.88□□□□□ -2.11
CDH12P55289 AC069114.2-201ENST00000604699 304 ntBASIC1.88□□□□□ -2.11
CDH12P55289 AC073349.3-201ENST00000617616 186 ntBASIC1.88□□□□□ -2.11
CDH12P55289 MIR548AY-201ENST00000617669 107 ntBASIC1.88□□□□□ -2.11
CDH12P55289 AC018630.2-201ENST00000534866 2403 ntBASIC1.87□□□□□ -2.11
CDH12P55289 RNU6-899P-201ENST00000363947 107 ntBASIC1.87□□□□□ -2.11
CDH12P55289 RNU4-13P-201ENST00000364019 141 ntBASIC1.87□□□□□ -2.11
CDH12P55289 MTND2P29-201ENST00000438595 412 ntBASIC1.87□□□□□ -2.11
CDH12P55289 RPS27P1-201ENST00000450552 247 ntBASIC1.87□□□□□ -2.11
CDH12P55289 RPS29P21-201ENST00000496272 170 ntBASIC1.87□□□□□ -2.11
CDH12P55289 MIR514B-201ENST00000516774 80 ntBASIC1.87□□□□□ -2.11
CDH12P55289 RNU6-794P-201ENST00000517261 64 ntBASIC1.87□□□□□ -2.11
CDH12P55289 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH12P55289 SUB1P4-201ENST00000566062 339 ntBASIC1.87□□□□□ -2.11
CDH12P55289 AC130289.1-201ENST00000577321 73 ntBASIC1.87□□□□□ -2.11
CDH12P55289 MIR3935-201ENST00000583472 104 ntBASIC1.87□□□□□ -2.11
CDH12P55289 POLR3GP1-201ENST00000594073 261 ntBASIC1.87□□□□□ -2.11
CDH12P55289 AC022217.4-201ENST00000604389 163 ntBASIC1.87□□□□□ -2.11
CDH12P55289 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.87□□□□□ -2.11
CDH12P55289 MIR6079-201ENST00000635807 62 ntBASIC1.87□□□□□ -2.11
CDH12P55289 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDH12P55289 AL359851.1-201ENST00000569460 4997 ntBASIC1.87□□□□□ -2.11
CDH12P55289 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CDH12P55289 AC131280.1-202ENST00000624067 4211 ntBASIC1.86□□□□□ -2.11
CDH12P55289 RNU6-1019P-201ENST00000364424 107 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms