Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
LIMK2P53671 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.64□□□□□ -2.15
LIMK2P53671 MIR335-201ENST00000362173 94 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 Y_RNA.14-201ENST00000362415 103 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 SNORA72.2-201ENST00000365028 127 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 RNU6-290P-201ENST00000365212 101 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 Y_RNA.331-201ENST00000365267 102 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 Y_RNA.350-201ENST00000365409 98 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 RNU6-1310P-201ENST00000384153 107 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 Y_RNA.446-201ENST00000384178 104 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 Y_RNA.447-201ENST00000384184 113 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 RNU6-21P-201ENST00000384710 107 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
LIMK2P53671 RNU2-54P-201ENST00000410299 190 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 RNA5SP475-201ENST00000410568 110 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 RNA5SP100-201ENST00000410903 110 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 RNA5SP59-201ENST00000410922 110 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 TOMM22P2-201ENST00000430735 237 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 AC005042.3-201ENST00000453230 174 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 AC114982.1-201ENST00000469402 321 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 RNU6-856P-201ENST00000516959 98 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 RNU6-1271P-201ENST00000517049 105 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 RNU2-12P-201ENST00000517216 168 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 SUB1P4-201ENST00000566062 339 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.64□□□□□ -2.15
LIMK2P53671 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.64□□□□□ -2.15
LIMK2P53671 AL391987.6-201ENST00000305671 199 ntBASIC1.63□□□□□ -2.15
LIMK2P53671 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
LIMK2P53671 RNU6-661P-201ENST00000362409 107 ntBASIC1.63□□□□□ -2.15
LIMK2P53671 MIR1185-2-201ENST00000408687 86 ntBASIC1.63□□□□□ -2.15
LIMK2P53671 RN7SKP101-201ENST00000411376 320 ntBASIC1.63□□□□□ -2.15
LIMK2P53671 BTF3P4-201ENST00000418852 495 ntBASIC1.63□□□□□ -2.15
LIMK2P53671 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.63□□□□□ -2.15
LIMK2P53671 snoU13.31-201ENST00000607291 104 ntBASIC1.63□□□□□ -2.15
LIMK2P53671 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LIMK2P53671 AC245060.5-201ENST00000610778 3293 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.62□□□□□ -2.15
LIMK2P53671 Y_RNA.418-201ENST00000384029 102 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 RNU6-418P-201ENST00000384035 107 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 RNU6-975P-201ENST00000384296 105 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 Y_RNA.569-201ENST00000384749 103 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.62□□□□□ -2.15
LIMK2P53671 AC074290.1-201ENST00000448883 135 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 AC016717.1-201ENST00000448918 286 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 ATP5J2P3-201ENST00000451550 258 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 RNU7-57P-201ENST00000459540 60 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 RPL39P38-201ENST00000467018 153 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.62□□□□□ -2.15
LIMK2P53671 SERF1AP1-201ENST00000514575 187 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 RNU6-1053P-201ENST00000515930 101 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 RNU6-155P-201ENST00000516347 100 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 RNU6-948P-201ENST00000516374 107 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 SCARNA24.2-201ENST00000516968 130 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 CBX3P4-201ENST00000538909 354 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 MIR3128-201ENST00000581957 66 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.62□□□□□ -2.15
LIMK2P53671 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.62□□□□□ -2.15
LIMK2P53671 AC006001.4-201ENST00000622243 395 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 WWP1P1-201ENST00000466609 2769 ntBASIC1.62□□□□□ -2.15
LIMK2P53671 Y_RNA.4-201ENST00000362333 112 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 Y_RNA.60-201ENST00000362831 98 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 Y_RNA.136-201ENST00000363444 102 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 RNU6-379P-201ENST00000363813 104 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 SNORD115-30-201ENST00000364117 82 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 RNU6-326P-201ENST00000365480 107 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 Y_RNA.383-201ENST00000383855 97 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 Y_RNA.477-201ENST00000384352 108 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 RNU6-1235P-201ENST00000384559 107 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LIMK2P53671 RNU4-62P-201ENST00000410125 130 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.61□□□□□ -2.15
LIMK2P53671 HSPE1P21-201ENST00000438283 308 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
LIMK2P53671 MRPS10P1-201ENST00000448483 130 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 MTND4LP30-201ENST00000454092 297 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 RNU6-498P-201ENST00000459468 107 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 RNU2-31P-201ENST00000516954 155 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 MIR5094-201ENST00000578766 85 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 MIR4303-201ENST00000581299 66 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 snoZ196.1-201ENST00000625269 89 ntBASIC1.61□□□□□ -2.15
LIMK2P53671 Y_RNA.243-201ENST00000364481 109 ntBASIC1.6□□□□□ -2.15
LIMK2P53671 Y_RNA.416-201ENST00000384014 113 ntBASIC1.6□□□□□ -2.15
LIMK2P53671 Y_RNA.476-201ENST00000384347 108 ntBASIC1.6□□□□□ -2.15
LIMK2P53671 AP1B1P2-201ENST00000416196 106 ntBASIC1.6□□□□□ -2.15
LIMK2P53671 POLR2KP2-201ENST00000438155 177 ntBASIC1.6□□□□□ -2.15
LIMK2P53671 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.6□□□□□ -2.15
LIMK2P53671 RNU6-221P-201ENST00000459541 99 ntBASIC1.6□□□□□ -2.15
LIMK2P53671 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.6□□□□□ -2.15
LIMK2P53671 AC008834.1-201ENST00000511612 175 ntBASIC1.6□□□□□ -2.15
LIMK2P53671 RNU6-1023P-201ENST00000516137 106 ntBASIC1.6□□□□□ -2.15
LIMK2P53671 RNU6-436P-201ENST00000516171 114 ntBASIC1.6□□□□□ -2.15
LIMK2P53671 Y_RNA.673-201ENST00000516306 88 ntBASIC1.6□□□□□ -2.15
LIMK2P53671 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.6□□□□□ -2.15
LIMK2P53671 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.6□□□□□ -2.15
LIMK2P53671 MIR3198-2-201ENST00000577868 80 ntBASIC1.6□□□□□ -2.15
LIMK2P53671 MIR3145-201ENST00000580727 82 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms