Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RNA5SP511-201ENST00000410487 115 ntBASIC1.98□□□□□ -2.09
NEK3P51956 RNU2-40P-201ENST00000410833 196 ntBASIC1.98□□□□□ -2.09
NEK3P51956 AC004965.1-201ENST00000413033 213 ntBASIC1.98□□□□□ -2.09
NEK3P51956 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.98□□□□□ -2.09
NEK3P51956 HMGN1P10-201ENST00000474557 553 ntBASIC1.98□□□□□ -2.09
NEK3P51956 AC099513.1-201ENST00000490423 301 ntBASIC1.98□□□□□ -2.09
NEK3P51956 RNU6-397P-201ENST00000516226 104 ntBASIC1.98□□□□□ -2.09
NEK3P51956 RNU6-764P-201ENST00000516396 105 ntBASIC1.98□□□□□ -2.09
NEK3P51956 RNU6-1046P-201ENST00000516538 107 ntBASIC1.98□□□□□ -2.09
NEK3P51956 AC131281.1-201ENST00000522984 164 ntBASIC1.98□□□□□ -2.09
NEK3P51956 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
NEK3P51956 AC005972.2-201ENST00000604690 348 ntBASIC1.98□□□□□ -2.09
NEK3P51956 AC073349.3-201ENST00000617616 186 ntBASIC1.98□□□□□ -2.09
NEK3P51956 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.98□□□□□ -2.09
NEK3P51956 ICE2P2-201ENST00000483823 2787 ntBASIC1.98□□□□□ -2.09
NEK3P51956 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
NEK3P51956 SNORD113-8-201ENST00000363497 74 ntBASIC1.97□□□□□ -2.09
NEK3P51956 Y_RNA.267-201ENST00000364679 109 ntBASIC1.97□□□□□ -2.09
NEK3P51956 MIR583-201ENST00000384846 75 ntBASIC1.97□□□□□ -2.09
NEK3P51956 RNU4-30P-201ENST00000410245 143 ntBASIC1.97□□□□□ -2.09
NEK3P51956 snoU13.23-201ENST00000458863 104 ntBASIC1.97□□□□□ -2.09
NEK3P51956 RNU6-1153P-201ENST00000516760 105 ntBASIC1.97□□□□□ -2.09
NEK3P51956 DEFB122-202ENST00000569013 197 ntBASIC1.97□□□□□ -2.09
NEK3P51956 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.97□□□□□ -2.09
NEK3P51956 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.97□□□□□ -2.09
NEK3P51956 RNU6-770P-201ENST00000363929 105 ntBASIC1.96□□□□□ -2.1
NEK3P51956 Y_RNA.265-201ENST00000364677 108 ntBASIC1.96□□□□□ -2.1
NEK3P51956 Y_RNA.383-201ENST00000383855 97 ntBASIC1.96□□□□□ -2.1
NEK3P51956 RNU6-203P-201ENST00000384038 104 ntBASIC1.96□□□□□ -2.1
NEK3P51956 U8.13-201ENST00000390842 128 ntBASIC1.96□□□□□ -2.1
NEK3P51956 Y_RNA.581-201ENST00000391017 97 ntBASIC1.96□□□□□ -2.1
NEK3P51956 RNU1-78P-201ENST00000391248 165 ntBASIC1.96□□□□□ -2.1
NEK3P51956 RNU6-855P-201ENST00000410395 104 ntBASIC1.96□□□□□ -2.1
NEK3P51956 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.96□□□□□ -2.1
NEK3P51956 AL591806.2-201ENST00000433122 173 ntBASIC1.96□□□□□ -2.1
NEK3P51956 RPS20P10-201ENST00000451209 253 ntBASIC1.96□□□□□ -2.1
NEK3P51956 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.96□□□□□ -2.1
NEK3P51956 RNA5SP182-201ENST00000516064 82 ntBASIC1.96□□□□□ -2.1
NEK3P51956 RNU6-63P-201ENST00000516690 95 ntBASIC1.96□□□□□ -2.1
NEK3P51956 RNU6-295P-201ENST00000516901 104 ntBASIC1.96□□□□□ -2.1
NEK3P51956 RNU7-116P-201ENST00000516940 62 ntBASIC1.96□□□□□ -2.1
NEK3P51956 AC015688.6-201ENST00000577737 104 ntBASIC1.96□□□□□ -2.1
NEK3P51956 MIR4524B-201ENST00000581569 115 ntBASIC1.96□□□□□ -2.1
NEK3P51956 AC006504.6-201ENST00000590142 199 ntBASIC1.96□□□□□ -2.1
NEK3P51956 AC012493.3-201ENST00000604494 112 ntBASIC1.96□□□□□ -2.1
NEK3P51956 AC004832.4-201ENST00000608952 331 ntBASIC1.96□□□□□ -2.1
NEK3P51956 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.96□□□□□ -2.1
NEK3P51956 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NEK3P51956 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
NEK3P51956 SNORA1B-201ENST00000362535 133 ntBASIC1.95□□□□□ -2.1
NEK3P51956 Y_RNA.136-201ENST00000363444 102 ntBASIC1.95□□□□□ -2.1
NEK3P51956 Y_RNA.341-201ENST00000365341 102 ntBASIC1.95□□□□□ -2.1
NEK3P51956 AL445685.2-201ENST00000422551 342 ntBASIC1.95□□□□□ -2.1
NEK3P51956 STAG3L5P-204ENST00000443759 179 ntBASIC1.95□□□□□ -2.1
NEK3P51956 RPS4XP11-201ENST00000446897 772 ntBASIC1.95□□□□□ -2.1
NEK3P51956 AC245517.4-201ENST00000448601 281 ntBASIC1.95□□□□□ -2.1
NEK3P51956 AL049830.1-201ENST00000468034 425 ntBASIC1.95□□□□□ -2.1
NEK3P51956 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.95□□□□□ -2.1
NEK3P51956 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.95□□□□□ -2.1
NEK3P51956 CBX3P4-201ENST00000538909 354 ntBASIC1.95□□□□□ -2.1
NEK3P51956 DEFB117-201ENST00000602356 141 ntBASIC1.95□□□□□ -2.1
NEK3P51956 SNRPGP19-201ENST00000603826 189 ntBASIC1.95□□□□□ -2.1
NEK3P51956 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
NEK3P51956 MIR302D-201ENST00000362275 68 ntBASIC1.94□□□□□ -2.1
NEK3P51956 RNU6-1323P-201ENST00000384025 107 ntBASIC1.94□□□□□ -2.1
NEK3P51956 SNORD116-13-201ENST00000384408 92 ntBASIC1.94□□□□□ -2.1
NEK3P51956 MIR764-201ENST00000390811 85 ntBASIC1.94□□□□□ -2.1
NEK3P51956 HSPE1P24-201ENST00000450782 238 ntBASIC1.94□□□□□ -2.1
NEK3P51956 RNU6-496P-201ENST00000516145 99 ntBASIC1.94□□□□□ -2.1
NEK3P51956 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.94□□□□□ -2.1
NEK3P51956 AP003072.1-201ENST00000531740 145 ntBASIC1.94□□□□□ -2.1
NEK3P51956 MIR4719-201ENST00000585233 84 ntBASIC1.94□□□□□ -2.1
NEK3P51956 Y_RNA.812-201ENST00000610788 101 ntBASIC1.94□□□□□ -2.1
NEK3P51956 Y_RNA.784-201ENST00000613803 101 ntBASIC1.94□□□□□ -2.1
NEK3P51956 Y_RNA.787-201ENST00000616522 101 ntBASIC1.94□□□□□ -2.1
NEK3P51956 Y_RNA.780-201ENST00000617336 101 ntBASIC1.94□□□□□ -2.1
NEK3P51956 Y_RNA.801-201ENST00000619005 101 ntBASIC1.94□□□□□ -2.1
NEK3P51956 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.94□□□□□ -2.1
NEK3P51956 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
NEK3P51956 Y_RNA.214-201ENST00000364201 112 ntBASIC1.93□□□□□ -2.1
NEK3P51956 Y_RNA.310-201ENST00000365063 113 ntBASIC1.93□□□□□ -2.1
NEK3P51956 Y_RNA.326-201ENST00000365176 113 ntBASIC1.93□□□□□ -2.1
NEK3P51956 SNORA72-201ENST00000384339 132 ntBASIC1.93□□□□□ -2.1
NEK3P51956 RPL31P63-201ENST00000422565 375 ntBASIC1.93□□□□□ -2.1
NEK3P51956 AC233266.1-201ENST00000454518 96 ntBASIC1.93□□□□□ -2.1
NEK3P51956 AC005908.1-201ENST00000468701 347 ntBASIC1.93□□□□□ -2.1
NEK3P51956 AC108210.2-201ENST00000503681 201 ntBASIC1.93□□□□□ -2.1
NEK3P51956 RNU6-237P-201ENST00000515985 71 ntBASIC1.93□□□□□ -2.1
NEK3P51956 RNU6-1291P-201ENST00000516591 104 ntBASIC1.93□□□□□ -2.1
NEK3P51956 AC110588.1-201ENST00000559699 137 ntBASIC1.93□□□□□ -2.1
NEK3P51956 PRR13P7-201ENST00000605538 430 ntBASIC1.93□□□□□ -2.1
NEK3P51956 AC242852.1-201ENST00000612151 96 ntBASIC1.93□□□□□ -2.1
NEK3P51956 MIR6845-201ENST00000613182 61 ntBASIC1.93□□□□□ -2.1
NEK3P51956 AC244015.1-201ENST00000622301 99 ntBASIC1.93□□□□□ -2.1
NEK3P51956 AC095038.3-201ENST00000634439 195 ntBASIC1.93□□□□□ -2.1
NEK3P51956 Y_RNA.153-201ENST00000363615 91 ntBASIC1.92□□□□□ -2.1
NEK3P51956 Y_RNA.210-201ENST00000364161 110 ntBASIC1.92□□□□□ -2.1
NEK3P51956 RNU6-136P-201ENST00000384663 107 ntBASIC1.92□□□□□ -2.1
NEK3P51956 RNU6-1105P-201ENST00000384774 107 ntBASIC1.92□□□□□ -2.1
NEK3P51956 SNORA26.9-201ENST00000391322 122 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 313.6 ms