Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MIR6845-201ENST00000613182 61 ntBASIC1.84□□□□□ -2.11
CLCNKAP51800 U6.108-201ENST00000637764 58 ntBASIC1.84□□□□□ -2.11
CLCNKAP51800 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CLCNKAP51800 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.84□□□□□ -2.12
CLCNKAP51800 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.12
CLCNKAP51800 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CLCNKAP51800 SNORA48.1-201ENST00000390879 135 ntBASIC1.83□□□□□ -2.12
CLCNKAP51800 RNU2-38P-201ENST00000410856 79 ntBASIC1.83□□□□□ -2.12
CLCNKAP51800 AL135790.2-201ENST00000437701 267 ntBASIC1.83□□□□□ -2.12
CLCNKAP51800 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.83□□□□□ -2.12
CLCNKAP51800 SNORA70.12-201ENST00000516084 153 ntBASIC1.83□□□□□ -2.12
CLCNKAP51800 Y_RNA.668-201ENST00000516233 93 ntBASIC1.83□□□□□ -2.12
CLCNKAP51800 RNU6-1337P-201ENST00000516525 95 ntBASIC1.83□□□□□ -2.12
CLCNKAP51800 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.83□□□□□ -2.12
CLCNKAP51800 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.83□□□□□ -2.12
CLCNKAP51800 MIR4713-201ENST00000582691 75 ntBASIC1.83□□□□□ -2.12
CLCNKAP51800 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.83□□□□□ -2.12
CLCNKAP51800 U4.1-201ENST00000620349 87 ntBASIC1.83□□□□□ -2.12
CLCNKAP51800 U6.104-201ENST00000637979 90 ntBASIC1.83□□□□□ -2.12
CLCNKAP51800 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.83□□□□□ -2.12
CLCNKAP51800 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CLCNKAP51800 AL391987.6-201ENST00000305671 199 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 SNORA25.1-201ENST00000362326 128 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 Y_RNA.136-201ENST00000363444 102 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 Y_RNA.193-201ENST00000363979 102 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 Y_RNA.288-201ENST00000364854 92 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 RNU6-326P-201ENST00000365480 107 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.82□□□□□ -2.12
CLCNKAP51800 Y_RNA.452-201ENST00000384202 108 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 SNORD116-13-201ENST00000384408 92 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 RNA5SP323-201ENST00000391094 133 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 SNORA53-201ENST00000391141 249 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 RNU6-855P-201ENST00000410395 104 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 EBAG9P1-201ENST00000418955 543 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.82□□□□□ -2.12
CLCNKAP51800 AL591806.2-201ENST00000433122 173 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 SERF1AP1-201ENST00000514575 187 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 RNU6-191P-201ENST00000516295 94 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 SNORA44.1-201ENST00000517031 108 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 RNU7-172P-201ENST00000517125 64 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.82□□□□□ -2.12
CLCNKAP51800 AC073413.2-201ENST00000604332 360 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 AL359075.3-201ENST00000613288 217 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.82□□□□□ -2.12
CLCNKAP51800 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.81□□□□□ -2.12
CLCNKAP51800 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CLCNKAP51800 SNORD114-7-201ENST00000362520 77 ntBASIC1.81□□□□□ -2.12
CLCNKAP51800 RNU6-702P-201ENST00000364982 107 ntBASIC1.81□□□□□ -2.12
CLCNKAP51800 RNU6-117P-201ENST00000365415 107 ntBASIC1.81□□□□□ -2.12
CLCNKAP51800 Y_RNA.518-201ENST00000384552 113 ntBASIC1.81□□□□□ -2.12
CLCNKAP51800 Y_RNA.556-201ENST00000384677 113 ntBASIC1.81□□□□□ -2.12
CLCNKAP51800 AC245047.4-201ENST00000433189 144 ntBASIC1.81□□□□□ -2.12
CLCNKAP51800 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.81□□□□□ -2.12
CLCNKAP51800 AC091959.1-201ENST00000495857 238 ntBASIC1.81□□□□□ -2.12
CLCNKAP51800 RPL23AP63-201ENST00000498752 471 ntBASIC1.81□□□□□ -2.12
CLCNKAP51800 MIR4255-201ENST00000579351 72 ntBASIC1.81□□□□□ -2.12
CLCNKAP51800 AC012433.1-201ENST00000588916 398 ntBASIC1.81□□□□□ -2.12
CLCNKAP51800 AC069114.2-201ENST00000604699 304 ntBASIC1.81□□□□□ -2.12
CLCNKAP51800 AC037487.3-201ENST00000606668 112 ntBASIC1.81□□□□□ -2.12
CLCNKAP51800 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CLCNKAP51800 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
CLCNKAP51800 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
CLCNKAP51800 RNU6-514P-201ENST00000384208 107 ntBASIC1.8□□□□□ -2.12
CLCNKAP51800 RNU6-136P-201ENST00000384663 107 ntBASIC1.8□□□□□ -2.12
CLCNKAP51800 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.8□□□□□ -2.12
CLCNKAP51800 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.8□□□□□ -2.12
CLCNKAP51800 SNORD127-201ENST00000458892 86 ntBASIC1.8□□□□□ -2.12
CLCNKAP51800 AL163195.1-201ENST00000496941 348 ntBASIC1.8□□□□□ -2.12
CLCNKAP51800 RNU7-99P-201ENST00000516271 62 ntBASIC1.8□□□□□ -2.12
CLCNKAP51800 RNU1-142P-201ENST00000516682 145 ntBASIC1.8□□□□□ -2.12
CLCNKAP51800 AC015712.3-201ENST00000559380 164 ntBASIC1.8□□□□□ -2.12
CLCNKAP51800 AC004832.4-201ENST00000608952 331 ntBASIC1.8□□□□□ -2.12
CLCNKAP51800 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
CLCNKAP51800 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.79□□□□□ -2.12
CLCNKAP51800 RNU6-376P-201ENST00000384731 106 ntBASIC1.79□□□□□ -2.12
CLCNKAP51800 MIR515-2-201ENST00000384883 83 ntBASIC1.79□□□□□ -2.12
CLCNKAP51800 MIR515-1-201ENST00000384884 83 ntBASIC1.79□□□□□ -2.12
CLCNKAP51800 MIR9-3-201ENST00000385084 90 ntBASIC1.79□□□□□ -2.12
CLCNKAP51800 MIR764-201ENST00000390811 85 ntBASIC1.79□□□□□ -2.12
CLCNKAP51800 RNU6-710P-201ENST00000410424 105 ntBASIC1.79□□□□□ -2.12
CLCNKAP51800 RNA5SP511-201ENST00000410487 115 ntBASIC1.79□□□□□ -2.12
CLCNKAP51800 RPL31P63-201ENST00000422565 375 ntBASIC1.79□□□□□ -2.12
CLCNKAP51800 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.79□□□□□ -2.12
CLCNKAP51800 AC024067.1-201ENST00000426199 223 ntBASIC1.79□□□□□ -2.12
CLCNKAP51800 RNA5SP57-201ENST00000459463 123 ntBASIC1.79□□□□□ -2.12
CLCNKAP51800 RNU6-1278P-201ENST00000516130 107 ntBASIC1.79□□□□□ -2.12
CLCNKAP51800 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.79□□□□□ -2.12
CLCNKAP51800 AC084364.2-201ENST00000546924 395 ntBASIC1.79□□□□□ -2.12
CLCNKAP51800 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.79□□□□□ -2.12
CLCNKAP51800 MIR4524B-201ENST00000581569 115 ntBASIC1.79□□□□□ -2.12
CLCNKAP51800 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.79□□□□□ -2.12
CLCNKAP51800 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
CLCNKAP51800 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
CLCNKAP51800 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
CLCNKAP51800 Y_RNA.14-201ENST00000362415 103 ntBASIC1.78□□□□□ -2.12
CLCNKAP51800 RNU6-1048P-201ENST00000364054 107 ntBASIC1.78□□□□□ -2.12
CLCNKAP51800 SNORA16.1-201ENST00000364597 132 ntBASIC1.78□□□□□ -2.12
CLCNKAP51800 Y_RNA.341-201ENST00000365341 102 ntBASIC1.78□□□□□ -2.12
CLCNKAP51800 RNU6-662P-201ENST00000384253 104 ntBASIC1.78□□□□□ -2.12
CLCNKAP51800 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms