Protein–RNA interactions for Protein: P48436

SOX9, Transcription factor SOX-9, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9P48436 MAPK10-266ENST00000641066 6555 ntBASIC2.87□□□□□ -1.95
SOX9P48436 ZNF271P-202ENST00000465539 1970 ntBASIC2.87□□□□□ -1.95
SOX9P48436 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.87□□□□□ -1.95
SOX9P48436 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SOX9P48436 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SOX9P48436 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SOX9P48436 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SOX9P48436 Y_RNA.441-201ENST00000384123 112 ntBASIC2.86□□□□□ -1.95
SOX9P48436 MT-TT-201ENST00000387460 66 ntBASIC2.86□□□□□ -1.95
SOX9P48436 RNA5SP270-201ENST00000411361 118 ntBASIC2.86□□□□□ -1.95
SOX9P48436 RNU6-1291P-201ENST00000516591 104 ntBASIC2.86□□□□□ -1.95
SOX9P48436 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SOX9P48436 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
SOX9P48436 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.85□□□□□ -1.95
SOX9P48436 RNU6-804P-201ENST00000384286 107 ntBASIC2.85□□□□□ -1.95
SOX9P48436 Y_RNA.587-201ENST00000391210 103 ntBASIC2.85□□□□□ -1.95
SOX9P48436 SNORA79-201ENST00000408376 140 ntBASIC2.85□□□□□ -1.95
SOX9P48436 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.85□□□□□ -1.95
SOX9P48436 AC008413.1-201ENST00000511864 177 ntBASIC2.85□□□□□ -1.95
SOX9P48436 RNU6-255P-201ENST00000516957 105 ntBASIC2.85□□□□□ -1.95
SOX9P48436 RNU6-341P-201ENST00000516973 96 ntBASIC2.85□□□□□ -1.95
SOX9P48436 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.85□□□□□ -1.95
SOX9P48436 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.85□□□□□ -1.95
SOX9P48436 RPL23AP91-201ENST00000569211 455 ntBASIC2.85□□□□□ -1.95
SOX9P48436 MIR3144-201ENST00000579460 79 ntBASIC2.85□□□□□ -1.95
SOX9P48436 MIR4431-201ENST00000579990 94 ntBASIC2.85□□□□□ -1.95
SOX9P48436 AC069114.2-201ENST00000604699 304 ntBASIC2.85□□□□□ -1.95
SOX9P48436 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.85□□□□□ -1.95
SOX9P48436 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
SOX9P48436 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SOX9P48436 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SOX9P48436 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
SOX9P48436 SNORA33-201ENST00000363664 130 ntBASIC2.84□□□□□ -1.95
SOX9P48436 Y_RNA.272-201ENST00000364696 102 ntBASIC2.84□□□□□ -1.95
SOX9P48436 RNU1-109P-201ENST00000383960 147 ntBASIC2.84□□□□□ -1.95
SOX9P48436 RNU6-1080P-201ENST00000383982 107 ntBASIC2.84□□□□□ -1.95
SOX9P48436 RNU6-746P-201ENST00000384112 109 ntBASIC2.84□□□□□ -1.95
SOX9P48436 MIR15B-201ENST00000385045 98 ntBASIC2.84□□□□□ -1.95
SOX9P48436 RNA5SP465-201ENST00000391195 109 ntBASIC2.84□□□□□ -1.95
SOX9P48436 RNU6-1135P-201ENST00000411083 103 ntBASIC2.84□□□□□ -1.95
SOX9P48436 RN7SKP101-201ENST00000411376 320 ntBASIC2.84□□□□□ -1.95
SOX9P48436 AL163195.1-201ENST00000496941 348 ntBASIC2.84□□□□□ -1.95
SOX9P48436 AC107027.2-201ENST00000512197 115 ntBASIC2.84□□□□□ -1.95
SOX9P48436 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.84□□□□□ -1.95
SOX9P48436 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.84□□□□□ -1.95
SOX9P48436 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.84□□□□□ -1.95
SOX9P48436 MTND1P7-201ENST00000632801 297 ntBASIC2.84□□□□□ -1.95
SOX9P48436 AC021753.1-201ENST00000635724 168 ntBASIC2.84□□□□□ -1.95
SOX9P48436 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SOX9P48436 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.83□□□□□ -1.96
SOX9P48436 MIR1278-201ENST00000408753 81 ntBASIC2.83□□□□□ -1.96
SOX9P48436 RNU6-394P-201ENST00000410735 107 ntBASIC2.83□□□□□ -1.96
SOX9P48436 RNU5E-9P-201ENST00000411164 104 ntBASIC2.83□□□□□ -1.96
SOX9P48436 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.83□□□□□ -1.96
SOX9P48436 RPS26P45-201ENST00000471748 340 ntBASIC2.83□□□□□ -1.96
SOX9P48436 RNU2-56P-201ENST00000516826 190 ntBASIC2.83□□□□□ -1.96
SOX9P48436 AP002004.2-201ENST00000531656 154 ntBASIC2.83□□□□□ -1.96
SOX9P48436 AC091178.2-201ENST00000584401 117 ntBASIC2.83□□□□□ -1.96
SOX9P48436 AL049861.1-201ENST00000603130 150 ntBASIC2.83□□□□□ -1.96
SOX9P48436 MIR6817-201ENST00000615588 66 ntBASIC2.83□□□□□ -1.96
SOX9P48436 U6.108-201ENST00000637764 58 ntBASIC2.83□□□□□ -1.96
SOX9P48436 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.83□□□□□ -1.96
SOX9P48436 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SOX9P48436 RNU6-774P-201ENST00000363238 107 ntBASIC2.82□□□□□ -1.96
SOX9P48436 RNA5SP68-201ENST00000363885 119 ntBASIC2.82□□□□□ -1.96
SOX9P48436 RNU6-449P-201ENST00000383914 107 ntBASIC2.82□□□□□ -1.96
SOX9P48436 SNORA46-201ENST00000384762 135 ntBASIC2.82□□□□□ -1.96
SOX9P48436 RNA5SP21-201ENST00000410917 96 ntBASIC2.82□□□□□ -1.96
SOX9P48436 RNU4-61P-201ENST00000411243 107 ntBASIC2.82□□□□□ -1.96
SOX9P48436 AC099677.2-201ENST00000436385 175 ntBASIC2.82□□□□□ -1.96
SOX9P48436 RPL39P40-201ENST00000445481 146 ntBASIC2.82□□□□□ -1.96
SOX9P48436 AL513328.1-201ENST00000446460 224 ntBASIC2.82□□□□□ -1.96
SOX9P48436 UQCRHP3-201ENST00000451503 251 ntBASIC2.82□□□□□ -1.96
SOX9P48436 RNA5SP148-201ENST00000516527 94 ntBASIC2.82□□□□□ -1.96
SOX9P48436 Y_RNA.703-201ENST00000516846 111 ntBASIC2.82□□□□□ -1.96
SOX9P48436 AL358944.1-201ENST00000528537 144 ntBASIC2.82□□□□□ -1.96
SOX9P48436 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.82□□□□□ -1.96
SOX9P48436 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SOX9P48436 AL161431.1-201ENST00000618966 4205 ntBASIC2.82□□□□□ -1.96
SOX9P48436 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.82□□□□□ -1.96
SOX9P48436 AC108206.1-201ENST00000570186 4159 ntBASIC2.81□□□□□ -1.96
SOX9P48436 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SOX9P48436 VTRNA1-1-201ENST00000363120 99 ntBASIC2.81□□□□□ -1.96
SOX9P48436 RNU4-84P-201ENST00000364200 139 ntBASIC2.81□□□□□ -1.96
SOX9P48436 SNORD116-18-201ENST00000383961 92 ntBASIC2.81□□□□□ -1.96
SOX9P48436 MIR518A2-201ENST00000384966 87 ntBASIC2.81□□□□□ -1.96
SOX9P48436 MIR597-201ENST00000384968 97 ntBASIC2.81□□□□□ -1.96
SOX9P48436 MIR9-1-201ENST00000385198 89 ntBASIC2.81□□□□□ -1.96
SOX9P48436 RNU6-239P-201ENST00000390990 99 ntBASIC2.81□□□□□ -1.96
SOX9P48436 Y_RNA.622-201ENST00000411091 108 ntBASIC2.81□□□□□ -1.96
SOX9P48436 AC069257.2-201ENST00000441819 155 ntBASIC2.81□□□□□ -1.96
SOX9P48436 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.81□□□□□ -1.96
SOX9P48436 Y_RNA.714-201ENST00000517065 90 ntBASIC2.81□□□□□ -1.96
SOX9P48436 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.81□□□□□ -1.96
SOX9P48436 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.81□□□□□ -1.96
SOX9P48436 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SOX9P48436 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
SOX9P48436 RNU6-1209P-201ENST00000363655 107 ntBASIC2.8□□□□□ -1.96
SOX9P48436 Y_RNA.170-201ENST00000363746 110 ntBASIC2.8□□□□□ -1.96
SOX9P48436 HMGN2P39-201ENST00000398005 273 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms