Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 RNU7-12P-201ENST00000516030 62 ntBASIC1.31□□□□□ -2.2
CDX1P47902 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.31□□□□□ -2.2
CDX1P47902 AL358944.1-201ENST00000528537 144 ntBASIC1.31□□□□□ -2.2
CDX1P47902 AL117336.2-201ENST00000602435 335 ntBASIC1.31□□□□□ -2.2
CDX1P47902 AL121655.1-201ENST00000605811 308 ntBASIC1.31□□□□□ -2.2
CDX1P47902 MIR8081-201ENST00000611533 95 ntBASIC1.31□□□□□ -2.2
CDX1P47902 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
CDX1P47902 AC010205.1-201ENST00000616668 449 ntBASIC1.31□□□□□ -2.2
CDX1P47902 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CDX1P47902 AL161722.3-201ENST00000605789 2983 ntBASIC1.3□□□□□ -2.2
CDX1P47902 Y_RNA.419-201ENST00000384041 102 ntBASIC1.3□□□□□ -2.2
CDX1P47902 Y_RNA.439-201ENST00000384119 94 ntBASIC1.3□□□□□ -2.2
CDX1P47902 Y_RNA.458-201ENST00000384240 102 ntBASIC1.3□□□□□ -2.2
CDX1P47902 U8.16-201ENST00000391279 133 ntBASIC1.3□□□□□ -2.2
CDX1P47902 AL390729.2-201ENST00000416137 156 ntBASIC1.3□□□□□ -2.2
CDX1P47902 AL162725.1-201ENST00000435405 301 ntBASIC1.3□□□□□ -2.2
CDX1P47902 AC015720.1-201ENST00000565251 277 ntBASIC1.3□□□□□ -2.2
CDX1P47902 SNORD58B-201ENST00000607313 66 ntBASIC1.3□□□□□ -2.2
CDX1P47902 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.29□□□□□ -2.2
CDX1P47902 MIR369-201ENST00000362155 70 ntBASIC1.29□□□□□ -2.2
CDX1P47902 RNU6-867P-201ENST00000364956 107 ntBASIC1.29□□□□□ -2.2
CDX1P47902 Y_RNA.329-201ENST00000365209 107 ntBASIC1.29□□□□□ -2.2
CDX1P47902 SNORD14.1-201ENST00000365609 90 ntBASIC1.29□□□□□ -2.2
CDX1P47902 RNU6-424P-201ENST00000384367 105 ntBASIC1.29□□□□□ -2.2
CDX1P47902 Y_RNA.570-201ENST00000384750 101 ntBASIC1.29□□□□□ -2.2
CDX1P47902 RNU2-61P-201ENST00000411069 191 ntBASIC1.29□□□□□ -2.2
CDX1P47902 AC005042.3-201ENST00000453230 174 ntBASIC1.29□□□□□ -2.2
CDX1P47902 U8.20-201ENST00000459445 131 ntBASIC1.29□□□□□ -2.2
CDX1P47902 RNU7-110P-201ENST00000516891 62 ntBASIC1.29□□□□□ -2.2
CDX1P47902 Y_RNA.713-201ENST00000517013 96 ntBASIC1.29□□□□□ -2.2
CDX1P47902 AL512310.8-201ENST00000550183 120 ntBASIC1.29□□□□□ -2.2
CDX1P47902 AL161670.1-201ENST00000554348 137 ntBASIC1.29□□□□□ -2.2
CDX1P47902 AL160236.1-201ENST00000556317 195 ntBASIC1.29□□□□□ -2.2
CDX1P47902 CYP3A52P-201ENST00000563326 91 ntBASIC1.29□□□□□ -2.2
CDX1P47902 AC011373.1-201ENST00000607270 237 ntBASIC1.29□□□□□ -2.2
CDX1P47902 AC007485.1-201ENST00000616755 206 ntBASIC1.29□□□□□ -2.2
CDX1P47902 AC090971.5-201ENST00000621102 293 ntBASIC1.29□□□□□ -2.2
CDX1P47902 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CDX1P47902 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CDX1P47902 RNU6-199P-201ENST00000362954 107 ntBASIC1.28□□□□□ -2.2
CDX1P47902 Y_RNA.112-201ENST00000363250 102 ntBASIC1.28□□□□□ -2.2
CDX1P47902 RNU4-50P-201ENST00000364361 141 ntBASIC1.28□□□□□ -2.2
CDX1P47902 Y_RNA.813-201ENST00000364639 102 ntBASIC1.28□□□□□ -2.2
CDX1P47902 RNU5E-4P-201ENST00000364931 120 ntBASIC1.28□□□□□ -2.2
CDX1P47902 RNU6-1080P-201ENST00000383982 107 ntBASIC1.28□□□□□ -2.2
CDX1P47902 Y_RNA.424-201ENST00000384063 103 ntBASIC1.28□□□□□ -2.2
CDX1P47902 Y_RNA.462-201ENST00000384268 102 ntBASIC1.28□□□□□ -2.2
CDX1P47902 SNORD116-13-201ENST00000384408 92 ntBASIC1.28□□□□□ -2.2
CDX1P47902 MCFD2P1-201ENST00000417812 300 ntBASIC1.28□□□□□ -2.2
CDX1P47902 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.28□□□□□ -2.2
CDX1P47902 AC093850.1-201ENST00000454121 251 ntBASIC1.28□□□□□ -2.2
CDX1P47902 SNORD13-201ENST00000459299 104 ntBASIC1.28□□□□□ -2.2
CDX1P47902 RPL39P38-201ENST00000467018 153 ntBASIC1.28□□□□□ -2.2
CDX1P47902 AC092991.1-201ENST00000477176 376 ntBASIC1.28□□□□□ -2.2
CDX1P47902 RPL30P7-201ENST00000479312 323 ntBASIC1.28□□□□□ -2.2
CDX1P47902 RNU6-966P-201ENST00000516479 104 ntBASIC1.28□□□□□ -2.2
CDX1P47902 RN7SKP88-201ENST00000516847 250 ntBASIC1.28□□□□□ -2.2
CDX1P47902 MIR3664-201ENST00000579074 99 ntBASIC1.28□□□□□ -2.2
CDX1P47902 7SK.8-201ENST00000612110 250 ntBASIC1.28□□□□□ -2.2
CDX1P47902 7SK.11-201ENST00000615477 250 ntBASIC1.28□□□□□ -2.2
CDX1P47902 MIR8065-201ENST00000620577 100 ntBASIC1.28□□□□□ -2.2
CDX1P47902 7SK.13-201ENST00000622040 250 ntBASIC1.28□□□□□ -2.2
CDX1P47902 uc_338.22-201ENST00000622722 187 ntBASIC1.28□□□□□ -2.2
CDX1P47902 AC091812.1-201ENST00000432235 1948 ntBASIC1.28□□□□□ -2.2
CDX1P47902 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
CDX1P47902 SNORD68-201ENST00000363214 84 ntBASIC1.27□□□□□ -2.21
CDX1P47902 RNU6-457P-201ENST00000363999 107 ntBASIC1.27□□□□□ -2.21
CDX1P47902 RNU4-41P-201ENST00000364426 143 ntBASIC1.27□□□□□ -2.21
CDX1P47902 Y_RNA.331-201ENST00000365267 102 ntBASIC1.27□□□□□ -2.21
CDX1P47902 Y_RNA.471-201ENST00000384312 102 ntBASIC1.27□□□□□ -2.21
CDX1P47902 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CDX1P47902 RNU6-710P-201ENST00000410424 105 ntBASIC1.27□□□□□ -2.21
CDX1P47902 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.27□□□□□ -2.21
CDX1P47902 Z98949.2-201ENST00000440996 144 ntBASIC1.27□□□□□ -2.21
CDX1P47902 RPS4XP11-201ENST00000446897 772 ntBASIC1.27□□□□□ -2.21
CDX1P47902 RPS29P23-201ENST00000458635 123 ntBASIC1.27□□□□□ -2.21
CDX1P47902 AC093852.1-201ENST00000503587 266 ntBASIC1.27□□□□□ -2.21
CDX1P47902 RNA5SP458-201ENST00000516188 119 ntBASIC1.27□□□□□ -2.21
CDX1P47902 AC040926.1-201ENST00000530195 238 ntBASIC1.27□□□□□ -2.21
CDX1P47902 AC011604.1-201ENST00000545978 196 ntBASIC1.27□□□□□ -2.21
CDX1P47902 AP000942.3-201ENST00000603702 160 ntBASIC1.27□□□□□ -2.21
CDX1P47902 AC005972.2-201ENST00000604690 348 ntBASIC1.27□□□□□ -2.21
CDX1P47902 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.27□□□□□ -2.21
CDX1P47902 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CDX1P47902 MIR26B-201ENST00000362251 77 ntBASIC1.26□□□□□ -2.21
CDX1P47902 Y_RNA.143-201ENST00000363520 106 ntBASIC1.26□□□□□ -2.21
CDX1P47902 Y_RNA.445-201ENST00000384168 102 ntBASIC1.26□□□□□ -2.21
CDX1P47902 RNU6-1105P-201ENST00000384774 107 ntBASIC1.26□□□□□ -2.21
CDX1P47902 AC024067.1-201ENST00000426199 223 ntBASIC1.26□□□□□ -2.21
CDX1P47902 RNU6-922P-201ENST00000516753 99 ntBASIC1.26□□□□□ -2.21
CDX1P47902 SNORD53B-201ENST00000577887 78 ntBASIC1.26□□□□□ -2.21
CDX1P47902 AL513534.2-201ENST00000603836 250 ntBASIC1.26□□□□□ -2.21
CDX1P47902 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CDX1P47902 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.26□□□□□ -2.21
CDX1P47902 Y_RNA.172-201ENST00000363765 102 ntBASIC1.25□□□□□ -2.21
CDX1P47902 Y_RNA.395-201ENST00000383945 109 ntBASIC1.25□□□□□ -2.21
CDX1P47902 SNORD26-201ENST00000384147 75 ntBASIC1.25□□□□□ -2.21
CDX1P47902 RNU6-937P-201ENST00000384325 106 ntBASIC1.25□□□□□ -2.21
CDX1P47902 RNU6-163P-201ENST00000384396 106 ntBASIC1.25□□□□□ -2.21
CDX1P47902 RNU6-21P-201ENST00000384710 107 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 273.4 ms