Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 RNU6-283P-201ENST00000364788 107 ntBASIC3.4□□□□□ -1.87
GPC1P35052 snoU2-30.1-201ENST00000365012 70 ntBASIC3.4□□□□□ -1.87
GPC1P35052 AL359837.1-201ENST00000381357 287 ntBASIC3.4□□□□□ -1.87
GPC1P35052 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.4□□□□□ -1.87
GPC1P35052 RNU6-1124P-201ENST00000384169 107 ntBASIC3.4□□□□□ -1.87
GPC1P35052 Y_RNA.531-201ENST00000384589 121 ntBASIC3.4□□□□□ -1.87
GPC1P35052 RNA5SP225-201ENST00000410874 135 ntBASIC3.4□□□□□ -1.87
GPC1P35052 GOT2P5-201ENST00000433995 546 ntBASIC3.4□□□□□ -1.87
GPC1P35052 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.4□□□□□ -1.87
GPC1P35052 RNA5SP57-201ENST00000459463 123 ntBASIC3.4□□□□□ -1.87
GPC1P35052 RNU2-27P-201ENST00000516185 142 ntBASIC3.4□□□□□ -1.87
GPC1P35052 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.4□□□□□ -1.87
GPC1P35052 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.4□□□□□ -1.87
GPC1P35052 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.4□□□□□ -1.87
GPC1P35052 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
GPC1P35052 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
GPC1P35052 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.39□□□□□ -1.87
GPC1P35052 Y_RNA.290-201ENST00000364879 114 ntBASIC3.39□□□□□ -1.87
GPC1P35052 PTMAP2-201ENST00000397627 327 ntBASIC3.39□□□□□ -1.87
GPC1P35052 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.39□□□□□ -1.87
GPC1P35052 AC099677.2-201ENST00000436385 175 ntBASIC3.39□□□□□ -1.87
GPC1P35052 AC107083.1-201ENST00000439643 279 ntBASIC3.39□□□□□ -1.87
GPC1P35052 RNU7-80P-201ENST00000459562 61 ntBASIC3.39□□□□□ -1.87
GPC1P35052 RPL23AP67-201ENST00000465341 474 ntBASIC3.39□□□□□ -1.87
GPC1P35052 RN7SL542P-201ENST00000467147 294 ntBASIC3.39□□□□□ -1.87
GPC1P35052 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.39□□□□□ -1.87
GPC1P35052 AC023632.4-201ENST00000517783 191 ntBASIC3.39□□□□□ -1.87
GPC1P35052 AC091932.4-201ENST00000623386 200 ntBASIC3.39□□□□□ -1.87
GPC1P35052 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.39□□□□□ -1.87
GPC1P35052 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.39□□□□□ -1.87
GPC1P35052 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
GPC1P35052 Z83843.1-201ENST00000604070 3685 ntBASIC3.38□□□□□ -1.87
GPC1P35052 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
GPC1P35052 RNY1P1-201ENST00000364372 112 ntBASIC3.38□□□□□ -1.87
GPC1P35052 Y_RNA.507-201ENST00000384500 99 ntBASIC3.38□□□□□ -1.87
GPC1P35052 MIR23B-201ENST00000384832 97 ntBASIC3.38□□□□□ -1.87
GPC1P35052 RNU6-938P-201ENST00000411285 103 ntBASIC3.38□□□□□ -1.87
GPC1P35052 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.38□□□□□ -1.87
GPC1P35052 CYCSP35-201ENST00000451978 304 ntBASIC3.38□□□□□ -1.87
GPC1P35052 AC006483.1-201ENST00000487308 313 ntBASIC3.38□□□□□ -1.87
GPC1P35052 RNU7-61P-201ENST00000515897 61 ntBASIC3.38□□□□□ -1.87
GPC1P35052 RNU6-162P-201ENST00000516228 103 ntBASIC3.38□□□□□ -1.87
GPC1P35052 SNORD45.4-201ENST00000516629 73 ntBASIC3.38□□□□□ -1.87
GPC1P35052 MIR3683-201ENST00000580847 82 ntBASIC3.38□□□□□ -1.87
GPC1P35052 AC002984.1-201ENST00000591692 448 ntBASIC3.38□□□□□ -1.87
GPC1P35052 AL513534.2-201ENST00000603836 250 ntBASIC3.38□□□□□ -1.87
GPC1P35052 FAM71BP1-201ENST00000604431 523 ntBASIC3.38□□□□□ -1.87
GPC1P35052 IGLL4P-201ENST00000614590 133 ntBASIC3.38□□□□□ -1.87
GPC1P35052 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.38□□□□□ -1.87
GPC1P35052 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
GPC1P35052 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.37□□□□□ -1.87
GPC1P35052 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.37□□□□□ -1.87
GPC1P35052 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
GPC1P35052 RNU6-228P-201ENST00000362700 106 ntBASIC3.37□□□□□ -1.87
GPC1P35052 Y_RNA.454-201ENST00000384224 113 ntBASIC3.37□□□□□ -1.87
GPC1P35052 Y_RNA.466-201ENST00000384294 113 ntBASIC3.37□□□□□ -1.87
GPC1P35052 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
GPC1P35052 Y_RNA.601-201ENST00000410500 113 ntBASIC3.37□□□□□ -1.87
GPC1P35052 CYCSP19-201ENST00000411715 316 ntBASIC3.37□□□□□ -1.87
GPC1P35052 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.37□□□□□ -1.87
GPC1P35052 MICF-203ENST00000432679 129 ntBASIC3.37□□□□□ -1.87
GPC1P35052 RNU7-94P-201ENST00000459576 63 ntBASIC3.37□□□□□ -1.87
GPC1P35052 AC022137.1-201ENST00000483735 151 ntBASIC3.37□□□□□ -1.87
GPC1P35052 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.37□□□□□ -1.87
GPC1P35052 AC113410.1-201ENST00000505029 247 ntBASIC3.37□□□□□ -1.87
GPC1P35052 RNU2-13P-201ENST00000515909 113 ntBASIC3.37□□□□□ -1.87
GPC1P35052 RNU1-45P-201ENST00000517191 141 ntBASIC3.37□□□□□ -1.87
GPC1P35052 NDUFB9P3-201ENST00000521269 501 ntBASIC3.37□□□□□ -1.87
GPC1P35052 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.37□□□□□ -1.87
GPC1P35052 AC022254.1-201ENST00000567857 235 ntBASIC3.37□□□□□ -1.87
GPC1P35052 MIR4429-201ENST00000580105 73 ntBASIC3.37□□□□□ -1.87
GPC1P35052 AP003355.3-201ENST00000623465 114 ntBASIC3.37□□□□□ -1.87
GPC1P35052 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.37□□□□□ -1.87
GPC1P35052 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.37□□□□□ -1.87
GPC1P35052 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
GPC1P35052 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
GPC1P35052 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
GPC1P35052 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
GPC1P35052 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.37□□□□□ -1.87
GPC1P35052 RNU6-1099P-201ENST00000363533 107 ntBASIC3.36□□□□□ -1.87
GPC1P35052 Y_RNA.155-201ENST00000363632 101 ntBASIC3.36□□□□□ -1.87
GPC1P35052 RNA5SP42-201ENST00000364278 115 ntBASIC3.36□□□□□ -1.87
GPC1P35052 U8.11-201ENST00000384699 133 ntBASIC3.36□□□□□ -1.87
GPC1P35052 RPL21P3-201ENST00000395517 478 ntBASIC3.36□□□□□ -1.87
GPC1P35052 AL445687.1-201ENST00000439946 251 ntBASIC3.36□□□□□ -1.87
GPC1P35052 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.36□□□□□ -1.87
GPC1P35052 U8.18-201ENST00000459285 133 ntBASIC3.36□□□□□ -1.87
GPC1P35052 TRBV12-1-201ENST00000479785 344 ntBASIC3.36□□□□□ -1.87
GPC1P35052 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.36□□□□□ -1.87
GPC1P35052 RNU6-795P-201ENST00000516323 103 ntBASIC3.36□□□□□ -1.87
GPC1P35052 RNU6-579P-201ENST00000516879 102 ntBASIC3.36□□□□□ -1.87
GPC1P35052 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.36□□□□□ -1.87
GPC1P35052 MIR92B-201ENST00000607575 96 ntBASIC3.36□□□□□ -1.87
GPC1P35052 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
GPC1P35052 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
GPC1P35052 Y_RNA.10-201ENST00000362371 110 ntBASIC3.35□□□□□ -1.87
GPC1P35052 RNA5SP387-201ENST00000364226 106 ntBASIC3.35□□□□□ -1.87
GPC1P35052 RN7SKP200-201ENST00000410564 320 ntBASIC3.35□□□□□ -1.87
GPC1P35052 RNU2-48P-201ENST00000410694 191 ntBASIC3.35□□□□□ -1.87
GPC1P35052 SNRPGP14-201ENST00000435400 219 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms