Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 EBAG9P1-201ENST00000418955 543 ntBASIC1.85□□□□□ -2.11
HOXC8P31273 HSPE1P21-201ENST00000438283 308 ntBASIC1.85□□□□□ -2.11
HOXC8P31273 Y_RNA.668-201ENST00000516233 93 ntBASIC1.85□□□□□ -2.11
HOXC8P31273 SCARNA24.2-201ENST00000516968 130 ntBASIC1.85□□□□□ -2.11
HOXC8P31273 RNU2-12P-201ENST00000517216 168 ntBASIC1.85□□□□□ -2.11
HOXC8P31273 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.85□□□□□ -2.11
HOXC8P31273 AC004817.2-201ENST00000561794 651 ntBASIC1.85□□□□□ -2.11
HOXC8P31273 AP001282.2-201ENST00000616149 309 ntBASIC1.85□□□□□ -2.11
HOXC8P31273 U6.104-201ENST00000637979 90 ntBASIC1.85□□□□□ -2.11
HOXC8P31273 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.85□□□□□ -2.11
HOXC8P31273 AC010615.1-201ENST00000594254 1764 ntBASIC1.85□□□□□ -2.11
HOXC8P31273 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
HOXC8P31273 MIR340-201ENST00000362125 95 ntBASIC1.84□□□□□ -2.11
HOXC8P31273 SNORD81.1-201ENST00000363064 77 ntBASIC1.84□□□□□ -2.11
HOXC8P31273 RNU6-324P-201ENST00000363957 106 ntBASIC1.84□□□□□ -2.11
HOXC8P31273 Y_RNA.237-201ENST00000364439 102 ntBASIC1.84□□□□□ -2.11
HOXC8P31273 SNORD48-201ENST00000364953 64 ntBASIC1.84□□□□□ -2.11
HOXC8P31273 RNU6-290P-201ENST00000365212 101 ntBASIC1.84□□□□□ -2.11
HOXC8P31273 SUMO2P12-201ENST00000405924 140 ntBASIC1.84□□□□□ -2.11
HOXC8P31273 RNU2-54P-201ENST00000410299 190 ntBASIC1.84□□□□□ -2.11
HOXC8P31273 MTCO1P44-201ENST00000441935 243 ntBASIC1.84□□□□□ -2.11
HOXC8P31273 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXC8P31273 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.84□□□□□ -2.11
HOXC8P31273 MRPS10P1-201ENST00000448483 130 ntBASIC1.84□□□□□ -2.11
HOXC8P31273 RNU6-221P-201ENST00000459541 99 ntBASIC1.84□□□□□ -2.11
HOXC8P31273 RNU6-1338P-201ENST00000516328 91 ntBASIC1.84□□□□□ -2.11
HOXC8P31273 RNA5SP364-201ENST00000516938 78 ntBASIC1.84□□□□□ -2.11
HOXC8P31273 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXC8P31273 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.84□□□□□ -2.11
HOXC8P31273 DNAJC19P9-201ENST00000555084 351 ntBASIC1.84□□□□□ -2.11
HOXC8P31273 MIR3145-201ENST00000580727 82 ntBASIC1.84□□□□□ -2.11
HOXC8P31273 MIR3935-201ENST00000583472 104 ntBASIC1.84□□□□□ -2.11
HOXC8P31273 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXC8P31273 AC006380.1-201ENST00000603598 186 ntBASIC1.84□□□□□ -2.11
HOXC8P31273 Y_RNA.383-201ENST00000383855 97 ntBASIC1.83□□□□□ -2.12
HOXC8P31273 RNU6-1235P-201ENST00000384559 107 ntBASIC1.83□□□□□ -2.12
HOXC8P31273 RNA5SP100-201ENST00000410903 110 ntBASIC1.83□□□□□ -2.12
HOXC8P31273 RNA5SP59-201ENST00000410922 110 ntBASIC1.83□□□□□ -2.12
HOXC8P31273 POLR2KP2-201ENST00000438155 177 ntBASIC1.83□□□□□ -2.12
HOXC8P31273 RNU6-498P-201ENST00000459468 107 ntBASIC1.83□□□□□ -2.12
HOXC8P31273 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.83□□□□□ -2.12
HOXC8P31273 AC027419.1-201ENST00000522976 328 ntBASIC1.83□□□□□ -2.12
HOXC8P31273 AC023157.2-201ENST00000540596 141 ntBASIC1.83□□□□□ -2.12
HOXC8P31273 AC022254.1-201ENST00000567857 235 ntBASIC1.83□□□□□ -2.12
HOXC8P31273 AC069114.2-201ENST00000604699 304 ntBASIC1.83□□□□□ -2.12
HOXC8P31273 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.83□□□□□ -2.12
HOXC8P31273 AC062037.2-201ENST00000610137 73 ntBASIC1.83□□□□□ -2.12
HOXC8P31273 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.83□□□□□ -2.12
HOXC8P31273 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.83□□□□□ -2.12
HOXC8P31273 U6.115-201ENST00000636045 103 ntBASIC1.83□□□□□ -2.12
HOXC8P31273 AL391987.6-201ENST00000305671 199 ntBASIC1.82□□□□□ -2.12
HOXC8P31273 SNORD115-30-201ENST00000364117 82 ntBASIC1.82□□□□□ -2.12
HOXC8P31273 Y_RNA.569-201ENST00000384749 103 ntBASIC1.82□□□□□ -2.12
HOXC8P31273 RNU2-7P-201ENST00000410794 178 ntBASIC1.82□□□□□ -2.12
HOXC8P31273 RNA5SP247-201ENST00000411181 105 ntBASIC1.82□□□□□ -2.12
HOXC8P31273 SNORD127-201ENST00000458892 86 ntBASIC1.82□□□□□ -2.12
HOXC8P31273 RNU6-1132P-201ENST00000459214 107 ntBASIC1.82□□□□□ -2.12
HOXC8P31273 RNU7-95P-201ENST00000459222 64 ntBASIC1.82□□□□□ -2.12
HOXC8P31273 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.82□□□□□ -2.12
HOXC8P31273 SUB1P4-201ENST00000566062 339 ntBASIC1.82□□□□□ -2.12
HOXC8P31273 AC010900.2-201ENST00000604508 210 ntBASIC1.82□□□□□ -2.12
HOXC8P31273 AL359821.1-201ENST00000605519 182 ntBASIC1.82□□□□□ -2.12
HOXC8P31273 AC127459.3-201ENST00000624328 466 ntBASIC1.82□□□□□ -2.12
HOXC8P31273 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
HOXC8P31273 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.82□□□□□ -2.12
HOXC8P31273 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HOXC8P31273 Y_RNA.14-201ENST00000362415 103 ntBASIC1.81□□□□□ -2.12
HOXC8P31273 Y_RNA.164-201ENST00000363709 102 ntBASIC1.81□□□□□ -2.12
HOXC8P31273 Y_RNA.307-201ENST00000365022 117 ntBASIC1.81□□□□□ -2.12
HOXC8P31273 Y_RNA.329-201ENST00000365209 107 ntBASIC1.81□□□□□ -2.12
HOXC8P31273 Y_RNA.401-201ENST00000383965 117 ntBASIC1.81□□□□□ -2.12
HOXC8P31273 Y_RNA.477-201ENST00000384352 108 ntBASIC1.81□□□□□ -2.12
HOXC8P31273 AC016909.1-201ENST00000415916 166 ntBASIC1.81□□□□□ -2.12
HOXC8P31273 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.81□□□□□ -2.12
HOXC8P31273 RPL36AP21-201ENST00000490372 323 ntBASIC1.81□□□□□ -2.12
HOXC8P31273 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.81□□□□□ -2.12
HOXC8P31273 RNU6-1041P-201ENST00000516254 102 ntBASIC1.81□□□□□ -2.12
HOXC8P31273 Y_RNA.673-201ENST00000516306 88 ntBASIC1.81□□□□□ -2.12
HOXC8P31273 RNU6-856P-201ENST00000516959 98 ntBASIC1.81□□□□□ -2.12
HOXC8P31273 AC025647.1-201ENST00000517879 253 ntBASIC1.81□□□□□ -2.12
HOXC8P31273 MIR4781-201ENST00000585250 76 ntBASIC1.81□□□□□ -2.12
HOXC8P31273 AC012433.1-201ENST00000588916 398 ntBASIC1.81□□□□□ -2.12
HOXC8P31273 DEFB117-201ENST00000602356 141 ntBASIC1.81□□□□□ -2.12
HOXC8P31273 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HOXC8P31273 RNU6-1266P-201ENST00000362794 105 ntBASIC1.8□□□□□ -2.12
HOXC8P31273 RNU1-96P-201ENST00000364163 162 ntBASIC1.8□□□□□ -2.12
HOXC8P31273 Y_RNA.243-201ENST00000364481 109 ntBASIC1.8□□□□□ -2.12
HOXC8P31273 Y_RNA.418-201ENST00000384029 102 ntBASIC1.8□□□□□ -2.12
HOXC8P31273 MIR30A-201ENST00000385092 71 ntBASIC1.8□□□□□ -2.12
HOXC8P31273 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HOXC8P31273 SNORA53-201ENST00000391141 249 ntBASIC1.8□□□□□ -2.12
HOXC8P31273 AL031003.1-201ENST00000404229 172 ntBASIC1.8□□□□□ -2.12
HOXC8P31273 AL355796.1-201ENST00000406706 323 ntBASIC1.8□□□□□ -2.12
HOXC8P31273 RNU6-436P-201ENST00000516171 114 ntBASIC1.8□□□□□ -2.12
HOXC8P31273 RNU2-31P-201ENST00000516954 155 ntBASIC1.8□□□□□ -2.12
HOXC8P31273 MIR3198-2-201ENST00000577868 80 ntBASIC1.8□□□□□ -2.12
HOXC8P31273 MIR3618-201ENST00000580330 88 ntBASIC1.8□□□□□ -2.12
HOXC8P31273 AL645939.4-201ENST00000604495 135 ntBASIC1.8□□□□□ -2.12
HOXC8P31273 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HOXC8P31273 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms