Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RNA5SP475-201ENST00000410568 110 ntBASIC1.04□□□□□ -2.24
HOXA9P31269 AC245047.3-201ENST00000429428 127 ntBASIC1.04□□□□□ -2.24
HOXA9P31269 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.04□□□□□ -2.24
HOXA9P31269 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.04□□□□□ -2.24
HOXA9P31269 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.04□□□□□ -2.24
HOXA9P31269 AC027119.1-201ENST00000440877 241 ntBASIC1.04□□□□□ -2.24
HOXA9P31269 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.04□□□□□ -2.24
HOXA9P31269 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.04□□□□□ -2.24
HOXA9P31269 AC097462.1-201ENST00000514125 324 ntBASIC1.04□□□□□ -2.24
HOXA9P31269 RNA5SP20-201ENST00000515976 84 ntBASIC1.04□□□□□ -2.24
HOXA9P31269 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.04□□□□□ -2.24
HOXA9P31269 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.04□□□□□ -2.24
HOXA9P31269 HSPE1P19-201ENST00000603327 295 ntBASIC1.04□□□□□ -2.24
HOXA9P31269 MIR6515-201ENST00000619843 57 ntBASIC1.04□□□□□ -2.24
HOXA9P31269 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
HOXA9P31269 AC018630.2-201ENST00000534866 2403 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 Y_RNA.124-201ENST00000363339 93 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 Y_RNA.314-201ENST00000365114 102 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 Y_RNA.356-201ENST00000365475 113 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 RNU6-1040P-201ENST00000383974 107 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 Y_RNA.496-201ENST00000384444 101 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 MIR513A1-201ENST00000385138 129 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 RNU6-1009P-201ENST00000390996 107 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 AC018865.2-201ENST00000423631 129 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 AC093019.1-201ENST00000443135 252 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 RPS29P28-201ENST00000446439 141 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 RNU7-34P-201ENST00000459394 64 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 SNORD19B-201ENST00000459623 84 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 AL117351.2-201ENST00000513571 157 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 RNU6-1012P-201ENST00000516606 109 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 Y_RNA.702-201ENST00000516843 96 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 RNU7-4P-201ENST00000516961 62 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 RNU7-172P-201ENST00000517125 64 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 RNU2-12P-201ENST00000517216 168 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 AC144568.1-201ENST00000520139 137 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.03□□□□□ -2.24
HOXA9P31269 AC091178.2-201ENST00000584401 117 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 AC004467.1-201ENST00000615678 330 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 AC104985.2-201ENST00000620598 500 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 AC091925.1-201ENST00000623204 462 ntBASIC1.03□□□□□ -2.24
HOXA9P31269 Y_RNA.70-201ENST00000362886 110 ntBASIC1.02□□□□□ -2.25
HOXA9P31269 Y_RNA.101-201ENST00000363154 102 ntBASIC1.02□□□□□ -2.25
HOXA9P31269 Y_RNA.187-201ENST00000363918 113 ntBASIC1.02□□□□□ -2.25
HOXA9P31269 RNU6-407P-201ENST00000365280 104 ntBASIC1.02□□□□□ -2.25
HOXA9P31269 RNU6-117P-201ENST00000365415 107 ntBASIC1.02□□□□□ -2.25
HOXA9P31269 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.02□□□□□ -2.25
HOXA9P31269 RNY3P4-201ENST00000384428 101 ntBASIC1.02□□□□□ -2.25
HOXA9P31269 RNU6-1065P-201ENST00000384513 106 ntBASIC1.02□□□□□ -2.25
HOXA9P31269 Y_RNA.605-201ENST00000410577 105 ntBASIC1.02□□□□□ -2.25
HOXA9P31269 MTCO3P19-201ENST00000415864 321 ntBASIC1.02□□□□□ -2.25
HOXA9P31269 AL137792.2-201ENST00000443484 235 ntBASIC1.02□□□□□ -2.25
HOXA9P31269 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.02□□□□□ -2.25
HOXA9P31269 RNU6-966P-201ENST00000516479 104 ntBASIC1.02□□□□□ -2.25
HOXA9P31269 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.02□□□□□ -2.25
HOXA9P31269 AC011476.5-201ENST00000615594 130 ntBASIC1.02□□□□□ -2.25
HOXA9P31269 U2.1-201ENST00000618978 145 ntBASIC1.02□□□□□ -2.25
HOXA9P31269 MIR6079-201ENST00000635807 62 ntBASIC1.02□□□□□ -2.25
HOXA9P31269 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
HOXA9P31269 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
HOXA9P31269 RNU6-1115P-201ENST00000362490 106 ntBASIC1.01□□□□□ -2.25
HOXA9P31269 RNA5SP327-201ENST00000362494 101 ntBASIC1.01□□□□□ -2.25
HOXA9P31269 Y_RNA.361-201ENST00000365515 120 ntBASIC1.01□□□□□ -2.25
HOXA9P31269 MRPL35P1-201ENST00000404272 572 ntBASIC1.01□□□□□ -2.25
HOXA9P31269 RN7SKP200-201ENST00000410564 320 ntBASIC1.01□□□□□ -2.25
HOXA9P31269 RNU6-1199P-201ENST00000411249 104 ntBASIC1.01□□□□□ -2.25
HOXA9P31269 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.01□□□□□ -2.25
HOXA9P31269 PGBD4P5-201ENST00000445958 426 ntBASIC1.01□□□□□ -2.25
HOXA9P31269 AC091021.1-201ENST00000468051 388 ntBASIC1.01□□□□□ -2.25
HOXA9P31269 AC019176.1-201ENST00000518519 225 ntBASIC1.01□□□□□ -2.25
HOXA9P31269 SUMO2P16-201ENST00000519475 264 ntBASIC1.01□□□□□ -2.25
HOXA9P31269 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.01□□□□□ -2.25
HOXA9P31269 AC023442.1-201ENST00000531247 422 ntBASIC1.01□□□□□ -2.25
HOXA9P31269 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.01□□□□□ -2.25
HOXA9P31269 MIR3684-201ENST00000579779 74 ntBASIC1.01□□□□□ -2.25
HOXA9P31269 AC133104.2-201ENST00000615272 193 ntBASIC1.01□□□□□ -2.25
HOXA9P31269 MIR8065-201ENST00000620577 100 ntBASIC1.01□□□□□ -2.25
HOXA9P31269 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
HOXA9P31269 Y_RNA.5-201ENST00000362334 102 ntBASIC1□□□□□ -2.25
HOXA9P31269 SNORD115-30-201ENST00000364117 82 ntBASIC1□□□□□ -2.25
HOXA9P31269 RNU6-1310P-201ENST00000384153 107 ntBASIC1□□□□□ -2.25
HOXA9P31269 RNU6-950P-201ENST00000384651 107 ntBASIC1□□□□□ -2.25
HOXA9P31269 MIR873-201ENST00000401120 77 ntBASIC1□□□□□ -2.25
HOXA9P31269 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1□□□□□ -2.25
HOXA9P31269 AC099799.1-201ENST00000439809 192 ntBASIC1□□□□□ -2.25
HOXA9P31269 MTATP6P23-201ENST00000440153 476 ntBASIC1□□□□□ -2.25
HOXA9P31269 AL133373.1-201ENST00000497098 94 ntBASIC1□□□□□ -2.25
HOXA9P31269 RNU6-63P-201ENST00000516690 95 ntBASIC1□□□□□ -2.25
HOXA9P31269 AL365434.2-201ENST00000607979 234 ntBASIC1□□□□□ -2.25
HOXA9P31269 AL021879.1-201ENST00000611756 288 ntBASIC1□□□□□ -2.25
HOXA9P31269 AC012676.2-201ENST00000619258 186 ntBASIC1□□□□□ -2.25
HOXA9P31269 5S_rRNA.13-201ENST00000622298 123 ntBASIC1□□□□□ -2.25
HOXA9P31269 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1□□□□□ -2.25
HOXA9P31269 RNU6-1123P-201ENST00000362347 106 ntBASIC0.99□□□□□ -2.25
HOXA9P31269 RNU4-73P-201ENST00000363164 141 ntBASIC0.99□□□□□ -2.25
HOXA9P31269 RNU6-626P-201ENST00000363354 107 ntBASIC0.99□□□□□ -2.25
HOXA9P31269 Y_RNA.146-201ENST00000363549 102 ntBASIC0.99□□□□□ -2.25
HOXA9P31269 Y_RNA.315-201ENST00000365117 102 ntBASIC0.99□□□□□ -2.25
HOXA9P31269 SNORA22-201ENST00000383907 134 ntBASIC0.99□□□□□ -2.25
HOXA9P31269 RNU6-20P-201ENST00000384106 107 ntBASIC0.99□□□□□ -2.25
HOXA9P31269 SNORA22C-201ENST00000384614 134 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms