Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 AF228730.3-201ENST00000436691 102 ntBASIC3.35□□□□□ -1.87
HOXA10P31260 AL441985.1-201ENST00000457727 251 ntBASIC3.35□□□□□ -1.87
HOXA10P31260 RNA5SP282-201ENST00000516355 108 ntBASIC3.35□□□□□ -1.87
HOXA10P31260 AC105245.1-201ENST00000581934 244 ntBASIC3.35□□□□□ -1.87
HOXA10P31260 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXA10P31260 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXA10P31260 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXA10P31260 AL356292.1-201ENST00000283110 373 ntBASIC3.34□□□□□ -1.87
HOXA10P31260 Y_RNA.323-201ENST00000365157 109 ntBASIC3.34□□□□□ -1.87
HOXA10P31260 Y_RNA.544-201ENST00000384650 113 ntBASIC3.34□□□□□ -1.87
HOXA10P31260 MIR1263-201ENST00000408324 86 ntBASIC3.34□□□□□ -1.87
HOXA10P31260 AC023141.4-201ENST00000412031 328 ntBASIC3.34□□□□□ -1.87
HOXA10P31260 AC008413.1-201ENST00000511864 177 ntBASIC3.34□□□□□ -1.87
HOXA10P31260 RNA5SP24-201ENST00000516478 95 ntBASIC3.34□□□□□ -1.87
HOXA10P31260 Y_RNA.685-201ENST00000516532 108 ntBASIC3.34□□□□□ -1.87
HOXA10P31260 HSPE1P18-201ENST00000517602 280 ntBASIC3.34□□□□□ -1.87
HOXA10P31260 AC025647.1-201ENST00000517879 253 ntBASIC3.34□□□□□ -1.87
HOXA10P31260 SNORD53-201ENST00000579969 78 ntBASIC3.34□□□□□ -1.87
HOXA10P31260 MIR2681-201ENST00000581814 105 ntBASIC3.34□□□□□ -1.87
HOXA10P31260 HMGN2P15-201ENST00000585707 270 ntBASIC3.34□□□□□ -1.87
HOXA10P31260 ZNF861P-201ENST00000588126 639 ntBASIC3.34□□□□□ -1.87
HOXA10P31260 AC062037.1-201ENST00000605302 128 ntBASIC3.34□□□□□ -1.87
HOXA10P31260 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.34□□□□□ -1.87
HOXA10P31260 AC064859.1-201ENST00000624741 174 ntBASIC3.34□□□□□ -1.87
HOXA10P31260 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXA10P31260 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HOXA10P31260 AC008264.2-201ENST00000610193 3731 ntBASIC3.34□□□□□ -1.88
HOXA10P31260 MIR26A1-201ENST00000362205 77 ntBASIC3.33□□□□□ -1.88
HOXA10P31260 RNU6-655P-201ENST00000362858 107 ntBASIC3.33□□□□□ -1.88
HOXA10P31260 RNU6-1014P-201ENST00000383940 103 ntBASIC3.33□□□□□ -1.88
HOXA10P31260 RPS3AP1-201ENST00000413190 320 ntBASIC3.33□□□□□ -1.88
HOXA10P31260 CALM2P4-201ENST00000430810 426 ntBASIC3.33□□□□□ -1.88
HOXA10P31260 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXA10P31260 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXA10P31260 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXA10P31260 UQCRHP3-201ENST00000451503 251 ntBASIC3.33□□□□□ -1.88
HOXA10P31260 AC023449.1-201ENST00000454464 154 ntBASIC3.33□□□□□ -1.88
HOXA10P31260 SNORD65B-201ENST00000459126 73 ntBASIC3.33□□□□□ -1.88
HOXA10P31260 AC010531.2-201ENST00000465012 153 ntBASIC3.33□□□□□ -1.88
HOXA10P31260 AC003982.1-202ENST00000469928 248 ntBASIC3.33□□□□□ -1.88
HOXA10P31260 RNA5SP236-201ENST00000516169 116 ntBASIC3.33□□□□□ -1.88
HOXA10P31260 RNU6-113P-201ENST00000516653 101 ntBASIC3.33□□□□□ -1.88
HOXA10P31260 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXA10P31260 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXA10P31260 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.33□□□□□ -1.88
HOXA10P31260 AC073308.1-201ENST00000623696 305 ntBASIC3.33□□□□□ -1.88
HOXA10P31260 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HOXA10P31260 MIR148B-201ENST00000362252 99 ntBASIC3.32□□□□□ -1.88
HOXA10P31260 RNA5SP173-201ENST00000364857 136 ntBASIC3.32□□□□□ -1.88
HOXA10P31260 RNU6-1138P-201ENST00000365359 106 ntBASIC3.32□□□□□ -1.88
HOXA10P31260 SNORA51.10-201ENST00000384418 136 ntBASIC3.32□□□□□ -1.88
HOXA10P31260 Y_RNA.549-201ENST00000384657 102 ntBASIC3.32□□□□□ -1.88
HOXA10P31260 SNORD11-201ENST00000459124 84 ntBASIC3.32□□□□□ -1.88
HOXA10P31260 COX6CP6-201ENST00000490840 228 ntBASIC3.32□□□□□ -1.88
HOXA10P31260 RNA5SP20-201ENST00000515976 84 ntBASIC3.32□□□□□ -1.88
HOXA10P31260 RNU6-970P-201ENST00000516312 107 ntBASIC3.32□□□□□ -1.88
HOXA10P31260 RNA5SP281-201ENST00000516504 135 ntBASIC3.32□□□□□ -1.88
HOXA10P31260 MIR4662B-201ENST00000579498 81 ntBASIC3.32□□□□□ -1.88
HOXA10P31260 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXA10P31260 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXA10P31260 RNU6-117P-201ENST00000365415 107 ntBASIC3.31□□□□□ -1.88
HOXA10P31260 AC015720.1-201ENST00000565251 277 ntBASIC3.31□□□□□ -1.88
HOXA10P31260 AL442128.1-201ENST00000615151 90 ntBASIC3.31□□□□□ -1.88
HOXA10P31260 CTSLP2-204ENST00000629029 392 ntBASIC3.31□□□□□ -1.88
HOXA10P31260 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXA10P31260 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HOXA10P31260 Y_RNA.49-201ENST00000362714 112 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 Y_RNA.203-201ENST00000364106 102 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 SNORD32B-201ENST00000364460 84 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 MIR488-201ENST00000365739 83 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 RNU6-440P-201ENST00000390882 105 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 SNORA12-201ENST00000391162 147 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 MIR300-201ENST00000401138 83 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 SNORA3.2-201ENST00000408221 125 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 RNA5SP511-201ENST00000410487 115 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXA10P31260 AC245102.2-201ENST00000448956 180 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 RNU7-57P-201ENST00000459540 60 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 RNU6-221P-201ENST00000459541 99 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 RNU6-56P-201ENST00000516986 93 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 AC007751.1-201ENST00000529260 376 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 RPL23AP91-201ENST00000569211 455 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 MIR3609-201ENST00000582661 80 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 AL929325.1-201ENST00000603096 117 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 AC006435.5-201ENST00000624486 112 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 MIR1245B-201ENST00000636115 69 ntBASIC3.3□□□□□ -1.88
HOXA10P31260 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXA10P31260 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXA10P31260 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXA10P31260 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXA10P31260 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXA10P31260 Y_RNA.66-201ENST00000362862 102 ntBASIC3.29□□□□□ -1.88
HOXA10P31260 RNU6-820P-201ENST00000384273 107 ntBASIC3.29□□□□□ -1.88
HOXA10P31260 RNU1-57P-201ENST00000384491 166 ntBASIC3.29□□□□□ -1.88
HOXA10P31260 MIR562-201ENST00000384894 95 ntBASIC3.29□□□□□ -1.88
HOXA10P31260 MIR1283-1-201ENST00000408494 87 ntBASIC3.29□□□□□ -1.88
HOXA10P31260 RPL39P34-201ENST00000477141 156 ntBASIC3.29□□□□□ -1.88
HOXA10P31260 SNORA31.1-201ENST00000515993 133 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms