Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC015720.1-201ENST00000565251 277 ntBASIC2.51□□□□□ -2.01
CNGA1P29973 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.51□□□□□ -2.01
CNGA1P29973 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
CNGA1P29973 UBE2WP1-201ENST00000362030 340 ntBASIC2.5□□□□□ -2.01
CNGA1P29973 Y_RNA.164-201ENST00000363709 102 ntBASIC2.5□□□□□ -2.01
CNGA1P29973 RNU6-296P-201ENST00000384608 107 ntBASIC2.5□□□□□ -2.01
CNGA1P29973 Y_RNA.562-201ENST00000384695 113 ntBASIC2.5□□□□□ -2.01
CNGA1P29973 RNU11-5P-201ENST00000391216 129 ntBASIC2.5□□□□□ -2.01
CNGA1P29973 RNA5SP511-201ENST00000410487 115 ntBASIC2.5□□□□□ -2.01
CNGA1P29973 AL162725.1-201ENST00000435405 301 ntBASIC2.5□□□□□ -2.01
CNGA1P29973 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.5□□□□□ -2.01
CNGA1P29973 RNU6-295P-201ENST00000516901 104 ntBASIC2.5□□□□□ -2.01
CNGA1P29973 AC136628.3-201ENST00000521868 290 ntBASIC2.5□□□□□ -2.01
CNGA1P29973 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.5□□□□□ -2.01
CNGA1P29973 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.5□□□□□ -2.01
CNGA1P29973 U2.14-201ENST00000615943 113 ntBASIC2.5□□□□□ -2.01
CNGA1P29973 MIR6766-201ENST00000622641 72 ntBASIC2.5□□□□□ -2.01
CNGA1P29973 AC018630.2-201ENST00000534866 2403 ntBASIC2.5□□□□□ -2.01
CNGA1P29973 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CNGA1P29973 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.49□□□□□ -2.01
CNGA1P29973 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CNGA1P29973 Y_RNA.14-201ENST00000362415 103 ntBASIC2.49□□□□□ -2.01
CNGA1P29973 RNA5SP247-201ENST00000411181 105 ntBASIC2.49□□□□□ -2.01
CNGA1P29973 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.49□□□□□ -2.01
CNGA1P29973 RPS27P1-201ENST00000450552 247 ntBASIC2.49□□□□□ -2.01
CNGA1P29973 RNU6-1132P-201ENST00000459214 107 ntBASIC2.49□□□□□ -2.01
CNGA1P29973 SNORA27.4-201ENST00000516650 95 ntBASIC2.49□□□□□ -2.01
CNGA1P29973 AC091178.2-201ENST00000584401 117 ntBASIC2.49□□□□□ -2.01
CNGA1P29973 AC012433.1-201ENST00000588916 398 ntBASIC2.49□□□□□ -2.01
CNGA1P29973 AL512605.2-201ENST00000592972 256 ntBASIC2.49□□□□□ -2.01
CNGA1P29973 AC062037.2-201ENST00000610137 73 ntBASIC2.49□□□□□ -2.01
CNGA1P29973 MIR6132-201ENST00000622083 109 ntBASIC2.49□□□□□ -2.01
CNGA1P29973 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CNGA1P29973 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CNGA1P29973 RNU6-801P-201ENST00000364087 105 ntBASIC2.48□□□□□ -2.01
CNGA1P29973 MIR520A-201ENST00000384862 85 ntBASIC2.48□□□□□ -2.01
CNGA1P29973 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.48□□□□□ -2.01
CNGA1P29973 RNU7-94P-201ENST00000459576 63 ntBASIC2.48□□□□□ -2.01
CNGA1P29973 AC022217.4-201ENST00000604389 163 ntBASIC2.48□□□□□ -2.01
CNGA1P29973 AL078604.3-201ENST00000615580 211 ntBASIC2.48□□□□□ -2.01
CNGA1P29973 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.48□□□□□ -2.01
CNGA1P29973 MIR6079-201ENST00000635807 62 ntBASIC2.48□□□□□ -2.01
CNGA1P29973 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CNGA1P29973 Y_RNA.44-201ENST00000362676 108 ntBASIC2.47□□□□□ -2.01
CNGA1P29973 Y_RNA.217-201ENST00000364214 105 ntBASIC2.47□□□□□ -2.01
CNGA1P29973 AC009310.1-201ENST00000414414 451 ntBASIC2.47□□□□□ -2.01
CNGA1P29973 AL606517.2-201ENST00000442855 241 ntBASIC2.47□□□□□ -2.01
CNGA1P29973 Y_RNA.641-201ENST00000459414 105 ntBASIC2.47□□□□□ -2.01
CNGA1P29973 AC091021.1-201ENST00000468051 388 ntBASIC2.47□□□□□ -2.01
CNGA1P29973 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.47□□□□□ -2.01
CNGA1P29973 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.47□□□□□ -2.01
CNGA1P29973 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.47□□□□□ -2.01
CNGA1P29973 AC010900.2-201ENST00000604508 210 ntBASIC2.47□□□□□ -2.01
CNGA1P29973 AC005972.2-201ENST00000604690 348 ntBASIC2.47□□□□□ -2.01
CNGA1P29973 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.47□□□□□ -2.01
CNGA1P29973 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
CNGA1P29973 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
CNGA1P29973 Y_RNA.275-201ENST00000364726 110 ntBASIC2.46□□□□□ -2.02
CNGA1P29973 Y_RNA.352-201ENST00000365439 102 ntBASIC2.46□□□□□ -2.02
CNGA1P29973 MIR17-201ENST00000385012 84 ntBASIC2.46□□□□□ -2.02
CNGA1P29973 MIR520G-201ENST00000385064 90 ntBASIC2.46□□□□□ -2.02
CNGA1P29973 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CNGA1P29973 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.46□□□□□ -2.02
CNGA1P29973 RPL39P38-201ENST00000467018 153 ntBASIC2.46□□□□□ -2.02
CNGA1P29973 AC079804.2-201ENST00000490376 200 ntBASIC2.46□□□□□ -2.02
CNGA1P29973 RNA5SP437-201ENST00000517249 129 ntBASIC2.46□□□□□ -2.02
CNGA1P29973 MIR4287-201ENST00000579398 78 ntBASIC2.46□□□□□ -2.02
CNGA1P29973 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.46□□□□□ -2.02
CNGA1P29973 AL773524.1-201ENST00000614065 229 ntBASIC2.46□□□□□ -2.02
CNGA1P29973 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.46□□□□□ -2.02
CNGA1P29973 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
CNGA1P29973 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CNGA1P29973 ZNF720P1-201ENST00000562403 1939 ntBASIC2.45□□□□□ -2.02
CNGA1P29973 AL596028.1-201ENST00000326971 197 ntBASIC2.45□□□□□ -2.02
CNGA1P29973 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CNGA1P29973 RNU6-1272P-201ENST00000362776 107 ntBASIC2.45□□□□□ -2.02
CNGA1P29973 RNU6-1323P-201ENST00000384025 107 ntBASIC2.45□□□□□ -2.02
CNGA1P29973 SNORA6-201ENST00000384033 151 ntBASIC2.45□□□□□ -2.02
CNGA1P29973 SNORA72.4-201ENST00000384174 132 ntBASIC2.45□□□□□ -2.02
CNGA1P29973 RNU6-662P-201ENST00000384253 104 ntBASIC2.45□□□□□ -2.02
CNGA1P29973 RNU6-136P-201ENST00000384663 107 ntBASIC2.45□□□□□ -2.02
CNGA1P29973 RNA5SP109-201ENST00000391010 116 ntBASIC2.45□□□□□ -2.02
CNGA1P29973 RNA5SP212-201ENST00000391223 107 ntBASIC2.45□□□□□ -2.02
CNGA1P29973 AC104332.1-201ENST00000440471 797 ntBASIC2.45□□□□□ -2.02
CNGA1P29973 RPS4XP11-201ENST00000446897 772 ntBASIC2.45□□□□□ -2.02
CNGA1P29973 RNU6-341P-201ENST00000516973 96 ntBASIC2.45□□□□□ -2.02
CNGA1P29973 AC068647.2-201ENST00000637380 353 ntBASIC2.45□□□□□ -2.02
CNGA1P29973 Y_RNA.350-201ENST00000365409 98 ntBASIC2.44□□□□□ -2.02
CNGA1P29973 SNORA26.5-201ENST00000391215 123 ntBASIC2.44□□□□□ -2.02
CNGA1P29973 MIR548H3-201ENST00000408771 118 ntBASIC2.44□□□□□ -2.02
CNGA1P29973 AC244636.1-201ENST00000421152 228 ntBASIC2.44□□□□□ -2.02
CNGA1P29973 RPL23AP63-201ENST00000498752 471 ntBASIC2.44□□□□□ -2.02
CNGA1P29973 SNORA31.17-201ENST00000516953 127 ntBASIC2.44□□□□□ -2.02
CNGA1P29973 RNU6-1096P-201ENST00000517089 102 ntBASIC2.44□□□□□ -2.02
CNGA1P29973 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.44□□□□□ -2.02
CNGA1P29973 AC022254.1-201ENST00000567857 235 ntBASIC2.44□□□□□ -2.02
CNGA1P29973 AC009831.4-201ENST00000620744 325 ntBASIC2.44□□□□□ -2.02
CNGA1P29973 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.44□□□□□ -2.02
CNGA1P29973 RNU4-13P-201ENST00000364019 141 ntBASIC2.43□□□□□ -2.02
CNGA1P29973 MIR562-201ENST00000384894 95 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms