Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC145146.1-201ENST00000496370 254 ntBASIC1□□□□□ -2.25
COL5A1P20908 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1□□□□□ -2.25
COL5A1P20908 RNU6-1146P-201ENST00000516282 102 ntBASIC1□□□□□ -2.25
COL5A1P20908 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1□□□□□ -2.25
COL5A1P20908 AC026271.5-201ENST00000577873 130 ntBASIC1□□□□□ -2.25
COL5A1P20908 AL357075.2-201ENST00000614906 189 ntBASIC1□□□□□ -2.25
COL5A1P20908 AC240442.1-201ENST00000616055 283 ntBASIC1□□□□□ -2.25
COL5A1P20908 AC010205.1-201ENST00000616668 449 ntBASIC1□□□□□ -2.25
COL5A1P20908 AL442644.1-201ENST00000454390 3105 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 MIR335-201ENST00000362173 94 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 Y_RNA.44-201ENST00000362676 108 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 RNU6-545P-201ENST00000362681 104 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 RNU1-76P-201ENST00000362903 159 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 RNU6-324P-201ENST00000363957 106 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 Y_RNA.331-201ENST00000365267 102 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 SNORD14D-201ENST00000384390 87 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 RNU6-1235P-201ENST00000384559 107 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 Y_RNA.541-201ENST00000384640 113 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 MIR586-201ENST00000385035 97 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 SNORA53-201ENST00000391141 249 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 RNU5A-5P-201ENST00000411054 116 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.99□□□□□ -2.25
COL5A1P20908 AC016925.1-201ENST00000458303 298 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 RNU6-498P-201ENST00000459468 107 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 AP000870.1-201ENST00000472927 406 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.99□□□□□ -2.25
COL5A1P20908 RN7SKP179-201ENST00000516126 217 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 RNU6-570P-201ENST00000517051 105 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 AL117187.1-201ENST00000555482 181 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 AC008269.2-201ENST00000561915 1105 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.99□□□□□ -2.25
COL5A1P20908 MIR6857-201ENST00000613267 93 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 U4atac.1-201ENST00000618345 95 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
COL5A1P20908 SNORD114-7-201ENST00000362520 77 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 RNA5SP361-201ENST00000362686 118 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 RNU4-90P-201ENST00000362773 141 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 SNORD114-23-201ENST00000363536 72 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 Y_RNA.176-201ENST00000363815 109 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 SNORD31B-201ENST00000364977 69 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 Y_RNA.526-201ENST00000384572 110 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 MIR934-201ENST00000401241 83 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 RNA5SP450-201ENST00000411206 102 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 HSPE1P25-201ENST00000455484 251 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 PRELID3BP1-201ENST00000457142 540 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 RNU6-625P-201ENST00000459412 107 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 RNU6-897P-201ENST00000517135 105 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.99□□□□□ -2.25
COL5A1P20908 DEFB131C-201ENST00000528817 165 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 AC018448.1-201ENST00000552843 316 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.99□□□□□ -2.25
COL5A1P20908 AC127459.3-201ENST00000624328 466 ntBASIC0.99□□□□□ -2.25
COL5A1P20908 RNU6-238P-201ENST00000363313 106 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 RNU6-770P-201ENST00000363929 105 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 SNORD87-201ENST00000364849 89 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 SNORA72.2-201ENST00000365028 127 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 RNU6-793P-201ENST00000384233 104 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 Y_RNA.462-201ENST00000384268 102 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 Y_RNA.570-201ENST00000384750 101 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 RNU6-713P-201ENST00000384761 107 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 SNORD115-46-201ENST00000390982 71 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 RNU11-5P-201ENST00000391216 129 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 MIR1185-2-201ENST00000408687 86 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 MIR1252-201ENST00000408861 65 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.98□□□□□ -2.25
COL5A1P20908 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.98□□□□□ -2.25
COL5A1P20908 RPS27P1-201ENST00000450552 247 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 AC005042.3-201ENST00000453230 174 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 RNU7-14P-201ENST00000459331 62 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 MRPS35P2-201ENST00000508242 191 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 RNU6-397P-201ENST00000516226 104 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 SNORA48.11-201ENST00000517015 89 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 AC034114.1-201ENST00000520293 285 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 AC036111.3-201ENST00000526389 112 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 MIR3973-201ENST00000579824 107 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 Y_RNA.772-201ENST00000606692 102 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 MIR1248-201ENST00000629190 106 ntBASIC0.98□□□□□ -2.25
COL5A1P20908 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
COL5A1P20908 MIR126-201ENST00000362291 85 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 RNU1-58P-201ENST00000362413 163 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 Y_RNA.64-201ENST00000362845 102 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 RNU6-626P-201ENST00000363354 107 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 RNU1-23P-201ENST00000363361 144 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 Y_RNA.383-201ENST00000383855 97 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 Y_RNA.415-201ENST00000384012 112 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 Y_RNA.439-201ENST00000384119 94 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 RNU6-975P-201ENST00000384296 105 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 MIR1262-201ENST00000408276 93 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 MIR548F4-201ENST00000408515 105 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 Y_RNA.592-201ENST00000410274 109 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.97□□□□□ -2.25
COL5A1P20908 CYP2C59P-201ENST00000457790 269 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 SNORD65B-201ENST00000459126 73 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 RNU6-221P-201ENST00000459541 99 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.97□□□□□ -2.25
COL5A1P20908 RNU6-436P-201ENST00000516171 114 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 RNA5SP395-201ENST00000516567 118 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.97□□□□□ -2.25
COL5A1P20908 AC026470.2-201ENST00000561492 181 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms