Protein–RNA interactions for Protein: P19793

RXRA, Retinoic acid receptor RXR-alpha, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRAP19793 AC062037.2-201ENST00000610137 73 ntBASIC2.01□□□□□ -2.09
RXRAP19793 U6.104-201ENST00000637979 90 ntBASIC2.01□□□□□ -2.09
RXRAP19793 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RXRAP19793 RNU1-22P-201ENST00000363334 158 ntBASIC2□□□□□ -2.09
RXRAP19793 Y_RNA.446-201ENST00000384178 104 ntBASIC2□□□□□ -2.09
RXRAP19793 MT-TG-201ENST00000387429 68 ntBASIC2□□□□□ -2.09
RXRAP19793 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2□□□□□ -2.09
RXRAP19793 MIR676-201ENST00000390702 67 ntBASIC2□□□□□ -2.09
RXRAP19793 SNORD115-46-201ENST00000390982 71 ntBASIC2□□□□□ -2.09
RXRAP19793 EBAG9P1-201ENST00000418955 543 ntBASIC2□□□□□ -2.09
RXRAP19793 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2□□□□□ -2.09
RXRAP19793 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2□□□□□ -2.09
RXRAP19793 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
RXRAP19793 RPS27P22-201ENST00000478056 241 ntBASIC2□□□□□ -2.09
RXRAP19793 AC098869.1-201ENST00000481627 292 ntBASIC2□□□□□ -2.09
RXRAP19793 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2□□□□□ -2.09
RXRAP19793 AL163195.1-201ENST00000496941 348 ntBASIC2□□□□□ -2.09
RXRAP19793 AC097462.1-201ENST00000514125 324 ntBASIC2□□□□□ -2.09
RXRAP19793 RNU6-1271P-201ENST00000517049 105 ntBASIC2□□□□□ -2.09
RXRAP19793 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2□□□□□ -2.09
RXRAP19793 DEFB122-202ENST00000569013 197 ntBASIC2□□□□□ -2.09
RXRAP19793 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2□□□□□ -2.09
RXRAP19793 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2□□□□□ -2.09
RXRAP19793 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2□□□□□ -2.09
RXRAP19793 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2□□□□□ -2.09
RXRAP19793 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2□□□□□ -2.09
RXRAP19793 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2□□□□□ -2.09
RXRAP19793 Y_RNA.307-201ENST00000365022 117 ntBASIC1.99□□□□□ -2.09
RXRAP19793 RNU6-1175P-201ENST00000365200 107 ntBASIC1.99□□□□□ -2.09
RXRAP19793 RNU6-937P-201ENST00000384325 106 ntBASIC1.99□□□□□ -2.09
RXRAP19793 RNA5SP323-201ENST00000391094 133 ntBASIC1.99□□□□□ -2.09
RXRAP19793 AC010154.1-201ENST00000425857 269 ntBASIC1.99□□□□□ -2.09
RXRAP19793 AL591806.2-201ENST00000433122 173 ntBASIC1.99□□□□□ -2.09
RXRAP19793 TRBVB-201ENST00000477100 408 ntBASIC1.99□□□□□ -2.09
RXRAP19793 HMGB3P17-201ENST00000504195 649 ntBASIC1.99□□□□□ -2.09
RXRAP19793 RNA5SP20-201ENST00000515976 84 ntBASIC1.99□□□□□ -2.09
RXRAP19793 RNA5SP481-201ENST00000516814 122 ntBASIC1.99□□□□□ -2.09
RXRAP19793 RNA5SP437-201ENST00000517249 129 ntBASIC1.99□□□□□ -2.09
RXRAP19793 AC023157.2-201ENST00000540596 141 ntBASIC1.99□□□□□ -2.09
RXRAP19793 Y_RNA.84-201ENST00000363011 104 ntBASIC1.98□□□□□ -2.09
RXRAP19793 snoU2_19.2-201ENST00000363024 80 ntBASIC1.98□□□□□ -2.09
RXRAP19793 MIR215-201ENST00000384858 110 ntBASIC1.98□□□□□ -2.09
RXRAP19793 RNU6-1186P-201ENST00000410429 97 ntBASIC1.98□□□□□ -2.09
RXRAP19793 RNU2-38P-201ENST00000410856 79 ntBASIC1.98□□□□□ -2.09
RXRAP19793 AC005042.3-201ENST00000453230 174 ntBASIC1.98□□□□□ -2.09
RXRAP19793 RNU6-1132P-201ENST00000459214 107 ntBASIC1.98□□□□□ -2.09
RXRAP19793 RPL23AP42-201ENST00000471152 471 ntBASIC1.98□□□□□ -2.09
RXRAP19793 RPS26P55-201ENST00000471178 356 ntBASIC1.98□□□□□ -2.09
RXRAP19793 RNU6-966P-201ENST00000516479 104 ntBASIC1.98□□□□□ -2.09
RXRAP19793 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.98□□□□□ -2.09
RXRAP19793 AC027419.1-201ENST00000522976 328 ntBASIC1.98□□□□□ -2.09
RXRAP19793 RNU6-661P-201ENST00000362409 107 ntBASIC1.97□□□□□ -2.09
RXRAP19793 RNU6-407P-201ENST00000365280 104 ntBASIC1.97□□□□□ -2.09
RXRAP19793 RNU6-117P-201ENST00000365415 107 ntBASIC1.97□□□□□ -2.09
RXRAP19793 Y_RNA.518-201ENST00000384552 113 ntBASIC1.97□□□□□ -2.09
RXRAP19793 RNU6-360P-201ENST00000390944 104 ntBASIC1.97□□□□□ -2.09
RXRAP19793 SNORA26.9-201ENST00000391322 122 ntBASIC1.97□□□□□ -2.09
RXRAP19793 AL031003.1-201ENST00000404229 172 ntBASIC1.97□□□□□ -2.09
RXRAP19793 Y_RNA.602-201ENST00000410535 92 ntBASIC1.97□□□□□ -2.09
RXRAP19793 RNU6-1203P-201ENST00000410703 110 ntBASIC1.97□□□□□ -2.09
RXRAP19793 RPS27P1-201ENST00000450552 247 ntBASIC1.97□□□□□ -2.09
RXRAP19793 HSPE1P13-201ENST00000451143 297 ntBASIC1.97□□□□□ -2.09
RXRAP19793 SNORD127-201ENST00000458892 86 ntBASIC1.97□□□□□ -2.09
RXRAP19793 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.97□□□□□ -2.09
RXRAP19793 SNORA70.12-201ENST00000516084 153 ntBASIC1.97□□□□□ -2.09
RXRAP19793 RNU6-155P-201ENST00000516347 100 ntBASIC1.97□□□□□ -2.09
RXRAP19793 RNU7-172P-201ENST00000517125 64 ntBASIC1.97□□□□□ -2.09
RXRAP19793 MIR3618-201ENST00000580330 88 ntBASIC1.97□□□□□ -2.09
RXRAP19793 MIR4769-201ENST00000584126 77 ntBASIC1.97□□□□□ -2.09
RXRAP19793 AC103810.8-201ENST00000607347 118 ntBASIC1.97□□□□□ -2.09
RXRAP19793 AC090425.1-201ENST00000610007 140 ntBASIC1.97□□□□□ -2.09
RXRAP19793 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RXRAP19793 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
RXRAP19793 Y_RNA.124-201ENST00000363339 93 ntBASIC1.96□□□□□ -2.1
RXRAP19793 SNORD113-8-201ENST00000363497 74 ntBASIC1.96□□□□□ -2.1
RXRAP19793 Y_RNA.447-201ENST00000384184 113 ntBASIC1.96□□□□□ -2.1
RXRAP19793 Y_RNA.476-201ENST00000384347 108 ntBASIC1.96□□□□□ -2.1
RXRAP19793 RNU6-102P-201ENST00000384485 104 ntBASIC1.96□□□□□ -2.1
RXRAP19793 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
RXRAP19793 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
RXRAP19793 Y_RNA.581-201ENST00000391017 97 ntBASIC1.96□□□□□ -2.1
RXRAP19793 RNU11-5P-201ENST00000391216 129 ntBASIC1.96□□□□□ -2.1
RXRAP19793 RNU2-61P-201ENST00000411069 191 ntBASIC1.96□□□□□ -2.1
RXRAP19793 RPL23AP36-201ENST00000413895 458 ntBASIC1.96□□□□□ -2.1
RXRAP19793 HSPE1P9-201ENST00000440046 311 ntBASIC1.96□□□□□ -2.1
RXRAP19793 RNU7-94P-201ENST00000459576 63 ntBASIC1.96□□□□□ -2.1
RXRAP19793 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.96□□□□□ -2.1
RXRAP19793 AC108210.2-201ENST00000503681 201 ntBASIC1.96□□□□□ -2.1
RXRAP19793 RNU6-436P-201ENST00000516171 114 ntBASIC1.96□□□□□ -2.1
RXRAP19793 AC011373.1-201ENST00000607270 237 ntBASIC1.96□□□□□ -2.1
RXRAP19793 AP001282.2-201ENST00000616149 309 ntBASIC1.96□□□□□ -2.1
RXRAP19793 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RXRAP19793 Y_RNA.14-201ENST00000362415 103 ntBASIC1.95□□□□□ -2.1
RXRAP19793 Y_RNA.350-201ENST00000365409 98 ntBASIC1.95□□□□□ -2.1
RXRAP19793 HMGN2P23-201ENST00000456759 269 ntBASIC1.95□□□□□ -2.1
RXRAP19793 SNORD13-201ENST00000459299 104 ntBASIC1.95□□□□□ -2.1
RXRAP19793 RPL39P38-201ENST00000467018 153 ntBASIC1.95□□□□□ -2.1
RXRAP19793 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.95□□□□□ -2.1
RXRAP19793 RNU6-496P-201ENST00000516145 99 ntBASIC1.95□□□□□ -2.1
RXRAP19793 SNORA25.15-201ENST00000516487 89 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 313.1 ms