Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.68□□□□□ -1.98
TNFRSF1AP19438 AC009487.2-201ENST00000420969 6821 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
TNFRSF1AP19438 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
TNFRSF1AP19438 MIR302B-201ENST00000362188 73 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 Y_RNA.17-201ENST00000362433 111 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 Y_RNA.111-201ENST00000363248 100 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 RNU6-525P-201ENST00000363685 104 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 Y_RNA.203-201ENST00000364106 102 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 RNU6-461P-201ENST00000364195 107 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 SNORA1-201ENST00000384107 130 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 SNORA7.4-201ENST00000384249 137 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 Y_RNA.486-201ENST00000384398 107 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 SNORA12-201ENST00000391162 147 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.67□□□□□ -1.98
TNFRSF1AP19438 AC023449.1-201ENST00000454464 154 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 RNU6-893P-201ENST00000458841 100 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 AC080013.2-201ENST00000460866 323 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 AC022137.1-201ENST00000483735 151 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 RNA5SP112-201ENST00000515937 99 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.67□□□□□ -1.98
TNFRSF1AP19438 Pinc.1-201ENST00000616452 154 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 MIR3651-201ENST00000630427 90 ntBASIC2.67□□□□□ -1.98
TNFRSF1AP19438 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
TNFRSF1AP19438 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.67□□□□□ -1.98
TNFRSF1AP19438 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
TNFRSF1AP19438 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.66□□□□□ -1.98
TNFRSF1AP19438 Y_RNA.107-201ENST00000363190 121 ntBASIC2.66□□□□□ -1.98
TNFRSF1AP19438 Y_RNA.198-201ENST00000364013 98 ntBASIC2.66□□□□□ -1.98
TNFRSF1AP19438 SNORA51.4-201ENST00000364993 124 ntBASIC2.66□□□□□ -1.98
TNFRSF1AP19438 MIR491-201ENST00000384877 84 ntBASIC2.66□□□□□ -1.98
TNFRSF1AP19438 MIR562-201ENST00000384894 95 ntBASIC2.66□□□□□ -1.98
TNFRSF1AP19438 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TNFRSF1AP19438 AL117342.1-201ENST00000404861 406 ntBASIC2.66□□□□□ -1.98
TNFRSF1AP19438 RNA5SP511-201ENST00000410487 115 ntBASIC2.66□□□□□ -1.98
TNFRSF1AP19438 AC097463.2-201ENST00000421074 142 ntBASIC2.66□□□□□ -1.98
TNFRSF1AP19438 RN7SL442P-201ENST00000473804 320 ntBASIC2.66□□□□□ -1.98
TNFRSF1AP19438 RN7SL504P-201ENST00000494496 287 ntBASIC2.66□□□□□ -1.98
TNFRSF1AP19438 SNORA64.4-201ENST00000516632 81 ntBASIC2.66□□□□□ -1.98
TNFRSF1AP19438 RPPH1-2P-201ENST00000516688 293 ntBASIC2.66□□□□□ -1.98
TNFRSF1AP19438 RNU7-149P-201ENST00000516739 59 ntBASIC2.66□□□□□ -1.98
TNFRSF1AP19438 RN7SKP57-201ENST00000517248 293 ntBASIC2.66□□□□□ -1.98
TNFRSF1AP19438 HSPE1P18-201ENST00000517602 280 ntBASIC2.66□□□□□ -1.98
TNFRSF1AP19438 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.66□□□□□ -1.98
TNFRSF1AP19438 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.66□□□□□ -1.98
TNFRSF1AP19438 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TNFRSF1AP19438 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
TNFRSF1AP19438 Y_RNA.93-201ENST00000363066 109 ntBASIC2.65□□□□□ -1.99
TNFRSF1AP19438 RNU6-486P-201ENST00000363116 107 ntBASIC2.65□□□□□ -1.99
TNFRSF1AP19438 RNY4P6-201ENST00000363667 96 ntBASIC2.65□□□□□ -1.99
TNFRSF1AP19438 RNU6-414P-201ENST00000363705 104 ntBASIC2.65□□□□□ -1.99
TNFRSF1AP19438 RNU4-13P-201ENST00000364019 141 ntBASIC2.65□□□□□ -1.99
TNFRSF1AP19438 RNU6-1138P-201ENST00000365359 106 ntBASIC2.65□□□□□ -1.99
TNFRSF1AP19438 RNU6-1296P-201ENST00000383879 107 ntBASIC2.65□□□□□ -1.99
TNFRSF1AP19438 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.65□□□□□ -1.99
TNFRSF1AP19438 MICF-203ENST00000432679 129 ntBASIC2.65□□□□□ -1.99
TNFRSF1AP19438 AC245102.2-201ENST00000448956 180 ntBASIC2.65□□□□□ -1.99
TNFRSF1AP19438 RPS3P1-201ENST00000456781 192 ntBASIC2.65□□□□□ -1.99
TNFRSF1AP19438 SNORD65B-201ENST00000459126 73 ntBASIC2.65□□□□□ -1.99
TNFRSF1AP19438 RNA5SP20-201ENST00000515976 84 ntBASIC2.65□□□□□ -1.99
TNFRSF1AP19438 RNU6-830P-201ENST00000516353 107 ntBASIC2.65□□□□□ -1.99
TNFRSF1AP19438 RNU6-1149P-201ENST00000516810 97 ntBASIC2.65□□□□□ -1.99
TNFRSF1AP19438 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.65□□□□□ -1.99
TNFRSF1AP19438 AC027419.1-201ENST00000522976 328 ntBASIC2.65□□□□□ -1.99
TNFRSF1AP19438 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.65□□□□□ -1.99
TNFRSF1AP19438 MIR8057-201ENST00000620957 69 ntBASIC2.65□□□□□ -1.99
TNFRSF1AP19438 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.65□□□□□ -1.99
TNFRSF1AP19438 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TNFRSF1AP19438 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TNFRSF1AP19438 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TNFRSF1AP19438 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.65□□□□□ -1.99
TNFRSF1AP19438 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.65□□□□□ -1.99
TNFRSF1AP19438 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.64□□□□□ -1.99
TNFRSF1AP19438 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
TNFRSF1AP19438 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
TNFRSF1AP19438 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.64□□□□□ -1.99
TNFRSF1AP19438 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
TNFRSF1AP19438 Y_RNA.796-201ENST00000364268 102 ntBASIC2.64□□□□□ -1.99
TNFRSF1AP19438 Y_RNA.799-201ENST00000364992 102 ntBASIC2.64□□□□□ -1.99
TNFRSF1AP19438 RNU6-117P-201ENST00000365415 107 ntBASIC2.64□□□□□ -1.99
TNFRSF1AP19438 MIR181A2-201ENST00000384863 110 ntBASIC2.64□□□□□ -1.99
TNFRSF1AP19438 AC009969.1-201ENST00000438726 172 ntBASIC2.64□□□□□ -1.99
TNFRSF1AP19438 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.64□□□□□ -1.99
TNFRSF1AP19438 OR9P1P-201ENST00000496431 281 ntBASIC2.64□□□□□ -1.99
TNFRSF1AP19438 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.64□□□□□ -1.99
TNFRSF1AP19438 AC010598.1-201ENST00000510378 103 ntBASIC2.64□□□□□ -1.99
TNFRSF1AP19438 RNA5SP385-201ENST00000515947 110 ntBASIC2.64□□□□□ -1.99
TNFRSF1AP19438 RNU6-126P-201ENST00000516685 103 ntBASIC2.64□□□□□ -1.99
TNFRSF1AP19438 MIR4662B-201ENST00000579498 81 ntBASIC2.64□□□□□ -1.99
TNFRSF1AP19438 MIR2681-201ENST00000581814 105 ntBASIC2.64□□□□□ -1.99
TNFRSF1AP19438 MIR3117-201ENST00000584034 78 ntBASIC2.64□□□□□ -1.99
TNFRSF1AP19438 MIR4506-201ENST00000584693 77 ntBASIC2.64□□□□□ -1.99
TNFRSF1AP19438 AL449363.1-201ENST00000617815 186 ntBASIC2.64□□□□□ -1.99
TNFRSF1AP19438 MIR7157-201ENST00000635801 60 ntBASIC2.64□□□□□ -1.99
TNFRSF1AP19438 MAPK10-266ENST00000641066 6555 ntBASIC2.64□□□□□ -1.99
TNFRSF1AP19438 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
TNFRSF1AP19438 AC080128.1-201ENST00000474389 1917 ntBASIC2.64□□□□□ -1.99
TNFRSF1AP19438 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms