Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CD44P16070 RNA5SP189-201ENST00000364920 115 ntBASIC4.5□□□□□ -1.69
CD44P16070 SNORA72.6-201ENST00000384520 129 ntBASIC4.5□□□□□ -1.69
CD44P16070 AC245047.3-201ENST00000429428 127 ntBASIC4.5□□□□□ -1.69
CD44P16070 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.5□□□□□ -1.69
CD44P16070 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.5□□□□□ -1.69
CD44P16070 HSPE1P24-201ENST00000450782 238 ntBASIC4.5□□□□□ -1.69
CD44P16070 AC005908.1-201ENST00000468701 347 ntBASIC4.5□□□□□ -1.69
CD44P16070 MIR5195-201ENST00000583555 115 ntBASIC4.5□□□□□ -1.69
CD44P16070 MIR5684-201ENST00000585074 65 ntBASIC4.5□□□□□ -1.69
CD44P16070 RN7SL722P-201ENST00000617780 284 ntBASIC4.5□□□□□ -1.69
CD44P16070 RN7SL565P-201ENST00000618246 284 ntBASIC4.5□□□□□ -1.69
CD44P16070 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CD44P16070 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CD44P16070 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CD44P16070 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CD44P16070 RN7SL303P-201ENST00000469773 251 ntBASIC4.49□□□□□ -1.69
CD44P16070 RPS29P22-201ENST00000472363 168 ntBASIC4.49□□□□□ -1.69
CD44P16070 AC091167.1-201ENST00000492017 396 ntBASIC4.49□□□□□ -1.69
CD44P16070 RNU6-881P-201ENST00000516813 102 ntBASIC4.49□□□□□ -1.69
CD44P16070 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD44P16070 MIR5096-201ENST00000583713 70 ntBASIC4.49□□□□□ -1.69
CD44P16070 MIR6730-201ENST00000622213 67 ntBASIC4.49□□□□□ -1.69
CD44P16070 MIR4727-201ENST00000622232 55 ntBASIC4.49□□□□□ -1.69
CD44P16070 Z82217.1-201ENST00000625157 8149 ntBASIC4.49□□□□□ -1.69
CD44P16070 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CD44P16070 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CD44P16070 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CD44P16070 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.48□□□□□ -1.69
CD44P16070 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CD44P16070 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CD44P16070 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.48□□□□□ -1.69
CD44P16070 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CD44P16070 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD44P16070 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD44P16070 MIR337-201ENST00000362281 93 ntBASIC4.48□□□□□ -1.69
CD44P16070 SNORD35B-201ENST00000363660 87 ntBASIC4.48□□□□□ -1.69
CD44P16070 CRYBB2P1-203ENST00000415709 538 ntBASIC4.48□□□□□ -1.69
CD44P16070 SNRPGP12-201ENST00000449481 213 ntBASIC4.48□□□□□ -1.69
CD44P16070 RN7SL600P-201ENST00000581811 299 ntBASIC4.48□□□□□ -1.69
CD44P16070 MIR8065-201ENST00000620577 100 ntBASIC4.48□□□□□ -1.69
CD44P16070 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CD44P16070 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD44P16070 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CD44P16070 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.48□□□□□ -1.69
CD44P16070 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD44P16070 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.48□□□□□ -1.69
CD44P16070 AC015813.6-201ENST00000624409 5808 ntBASIC4.48□□□□□ -1.69
CD44P16070 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CD44P16070 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD44P16070 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CD44P16070 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CD44P16070 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CD44P16070 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.47□□□□□ -1.69
CD44P16070 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CD44P16070 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CD44P16070 SNORD116-24-201ENST00000384549 92 ntBASIC4.47□□□□□ -1.69
CD44P16070 MIR585-201ENST00000384887 94 ntBASIC4.47□□□□□ -1.69
CD44P16070 SNORD90-201ENST00000391145 111 ntBASIC4.47□□□□□ -1.69
CD44P16070 AL606517.2-201ENST00000442855 241 ntBASIC4.47□□□□□ -1.69
CD44P16070 MIR4277-201ENST00000578298 84 ntBASIC4.47□□□□□ -1.69
CD44P16070 MIR3138-201ENST00000585238 82 ntBASIC4.47□□□□□ -1.69
CD44P16070 AC069503.3-201ENST00000618674 145 ntBASIC4.47□□□□□ -1.69
CD44P16070 AF117829.1-206ENST00000621883 3802 ntBASIC4.47□□□□□ -1.69
CD44P16070 MIR3653-201ENST00000625572 110 ntBASIC4.47□□□□□ -1.69
CD44P16070 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CD44P16070 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CD44P16070 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CD44P16070 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.47□□□□□ -1.69
CD44P16070 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CD44P16070 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CD44P16070 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CD44P16070 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CD44P16070 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CD44P16070 MIR548U-201ENST00000390728 81 ntBASIC4.46□□□□□ -1.7
CD44P16070 RNU2-7P-201ENST00000410794 178 ntBASIC4.46□□□□□ -1.7
CD44P16070 STAG3L5P-204ENST00000443759 179 ntBASIC4.46□□□□□ -1.7
CD44P16070 BX510359.1-201ENST00000456973 237 ntBASIC4.46□□□□□ -1.7
CD44P16070 RPL29P14-201ENST00000495837 428 ntBASIC4.46□□□□□ -1.7
CD44P16070 RNU4ATAC9P-201ENST00000517146 126 ntBASIC4.46□□□□□ -1.7
CD44P16070 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.46□□□□□ -1.7
CD44P16070 AC025627.2-201ENST00000576220 160 ntBASIC4.46□□□□□ -1.7
CD44P16070 AC007336.1-201ENST00000576365 3828 ntBASIC4.46□□□□□ -1.7
CD44P16070 MIR4330-201ENST00000579077 105 ntBASIC4.46□□□□□ -1.7
CD44P16070 AC243994.1-201ENST00000618627 109 ntBASIC4.46□□□□□ -1.7
CD44P16070 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CD44P16070 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CD44P16070 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CD44P16070 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CD44P16070 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CD44P16070 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
CD44P16070 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CD44P16070 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.45□□□□□ -1.7
CD44P16070 MIR383-201ENST00000362257 73 ntBASIC4.45□□□□□ -1.7
CD44P16070 RNU1-32P-201ENST00000363937 159 ntBASIC4.45□□□□□ -1.7
CD44P16070 SNORA38-201ENST00000363946 132 ntBASIC4.45□□□□□ -1.7
CD44P16070 RNA5SP387-201ENST00000364226 106 ntBASIC4.45□□□□□ -1.7
CD44P16070 RNU6-291P-201ENST00000384720 107 ntBASIC4.45□□□□□ -1.7
CD44P16070 AL161788.1-201ENST00000441805 169 ntBASIC4.45□□□□□ -1.7
CD44P16070 AL591623.2-201ENST00000449978 222 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms