Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 RNU2-7P-201ENST00000410794 178 ntBASIC1.84□□□□□ -2.11
PCNAP12004 TRBVB-201ENST00000477100 408 ntBASIC1.84□□□□□ -2.11
PCNAP12004 RNU6-1338P-201ENST00000516328 91 ntBASIC1.84□□□□□ -2.11
PCNAP12004 AC004832.4-201ENST00000608952 331 ntBASIC1.84□□□□□ -2.11
PCNAP12004 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.83□□□□□ -2.12
PCNAP12004 SNORD114-7-201ENST00000362520 77 ntBASIC1.83□□□□□ -2.12
PCNAP12004 RNU6-1048P-201ENST00000364054 107 ntBASIC1.83□□□□□ -2.12
PCNAP12004 Y_RNA.237-201ENST00000364439 102 ntBASIC1.83□□□□□ -2.12
PCNAP12004 MIR520A-201ENST00000384862 85 ntBASIC1.83□□□□□ -2.12
PCNAP12004 RNA5SP212-201ENST00000391223 107 ntBASIC1.83□□□□□ -2.12
PCNAP12004 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.83□□□□□ -2.12
PCNAP12004 AL445685.2-201ENST00000422551 342 ntBASIC1.83□□□□□ -2.12
PCNAP12004 AC010154.1-201ENST00000425857 269 ntBASIC1.83□□□□□ -2.12
PCNAP12004 HSPE1P9-201ENST00000440046 311 ntBASIC1.83□□□□□ -2.12
PCNAP12004 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.83□□□□□ -2.12
PCNAP12004 RNU6-1278P-201ENST00000516130 107 ntBASIC1.83□□□□□ -2.12
PCNAP12004 RNU6-191P-201ENST00000516295 94 ntBASIC1.83□□□□□ -2.12
PCNAP12004 RNU6-1291P-201ENST00000516591 104 ntBASIC1.83□□□□□ -2.12
PCNAP12004 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.83□□□□□ -2.12
PCNAP12004 AL161670.1-201ENST00000554348 137 ntBASIC1.83□□□□□ -2.12
PCNAP12004 AC015720.1-201ENST00000565251 277 ntBASIC1.83□□□□□ -2.12
PCNAP12004 AL162730.1-201ENST00000605734 292 ntBASIC1.83□□□□□ -2.12
PCNAP12004 MIR6079-201ENST00000635807 62 ntBASIC1.83□□□□□ -2.12
PCNAP12004 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.83□□□□□ -2.12
PCNAP12004 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PCNAP12004 AC018630.2-201ENST00000534866 2403 ntBASIC1.82□□□□□ -2.12
PCNAP12004 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
PCNAP12004 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
PCNAP12004 Y_RNA.267-201ENST00000364679 109 ntBASIC1.82□□□□□ -2.12
PCNAP12004 SNORA70B-201ENST00000384210 135 ntBASIC1.82□□□□□ -2.12
PCNAP12004 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.82□□□□□ -2.12
PCNAP12004 HSPE1P13-201ENST00000451143 297 ntBASIC1.82□□□□□ -2.12
PCNAP12004 RPS20P10-201ENST00000451209 253 ntBASIC1.82□□□□□ -2.12
PCNAP12004 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.82□□□□□ -2.12
PCNAP12004 RPS29P21-201ENST00000496272 170 ntBASIC1.82□□□□□ -2.12
PCNAP12004 RNU2-31P-201ENST00000516954 155 ntBASIC1.82□□□□□ -2.12
PCNAP12004 CBX3P4-201ENST00000538909 354 ntBASIC1.82□□□□□ -2.12
PCNAP12004 MIR4513-201ENST00000581077 86 ntBASIC1.82□□□□□ -2.12
PCNAP12004 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.82□□□□□ -2.12
PCNAP12004 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
PCNAP12004 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
PCNAP12004 Y_RNA.136-201ENST00000363444 102 ntBASIC1.81□□□□□ -2.12
PCNAP12004 Y_RNA.310-201ENST00000365063 113 ntBASIC1.81□□□□□ -2.12
PCNAP12004 RNA5SP126-201ENST00000365092 109 ntBASIC1.81□□□□□ -2.12
PCNAP12004 Y_RNA.341-201ENST00000365341 102 ntBASIC1.81□□□□□ -2.12
PCNAP12004 snosnR66.1-201ENST00000391095 99 ntBASIC1.81□□□□□ -2.12
PCNAP12004 AC019129.1-201ENST00000403786 261 ntBASIC1.81□□□□□ -2.12
PCNAP12004 MIR1302-6-201ENST00000408466 90 ntBASIC1.81□□□□□ -2.12
PCNAP12004 RNU2-14P-201ENST00000411053 191 ntBASIC1.81□□□□□ -2.12
PCNAP12004 AC009310.1-201ENST00000414414 451 ntBASIC1.81□□□□□ -2.12
PCNAP12004 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.81□□□□□ -2.12
PCNAP12004 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.81□□□□□ -2.12
PCNAP12004 AC245047.3-201ENST00000429428 127 ntBASIC1.81□□□□□ -2.12
PCNAP12004 SNORA31.10-201ENST00000516482 106 ntBASIC1.81□□□□□ -2.12
PCNAP12004 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.81□□□□□ -2.12
PCNAP12004 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.81□□□□□ -2.12
PCNAP12004 AC091178.2-201ENST00000584401 117 ntBASIC1.81□□□□□ -2.12
PCNAP12004 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.81□□□□□ -2.12
PCNAP12004 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PCNAP12004 SNORA25.1-201ENST00000362326 128 ntBASIC1.8□□□□□ -2.12
PCNAP12004 RNU6-710P-201ENST00000410424 105 ntBASIC1.8□□□□□ -2.12
PCNAP12004 OOSP1P1-201ENST00000423265 274 ntBASIC1.8□□□□□ -2.12
PCNAP12004 AL162725.1-201ENST00000435405 301 ntBASIC1.8□□□□□ -2.12
PCNAP12004 RPS4XP11-201ENST00000446897 772 ntBASIC1.8□□□□□ -2.12
PCNAP12004 AC233266.1-201ENST00000454518 96 ntBASIC1.8□□□□□ -2.12
PCNAP12004 AC091959.1-201ENST00000495857 238 ntBASIC1.8□□□□□ -2.12
PCNAP12004 AC008834.1-201ENST00000511612 175 ntBASIC1.8□□□□□ -2.12
PCNAP12004 RNU6-1096P-201ENST00000517089 102 ntBASIC1.8□□□□□ -2.12
PCNAP12004 AC022254.1-201ENST00000567857 235 ntBASIC1.8□□□□□ -2.12
PCNAP12004 AL929325.1-201ENST00000603096 117 ntBASIC1.8□□□□□ -2.12
PCNAP12004 AC010900.2-201ENST00000604508 210 ntBASIC1.8□□□□□ -2.12
PCNAP12004 AC242852.1-201ENST00000612151 96 ntBASIC1.8□□□□□ -2.12
PCNAP12004 AC244015.1-201ENST00000622301 99 ntBASIC1.8□□□□□ -2.12
PCNAP12004 AC068647.2-201ENST00000637380 353 ntBASIC1.8□□□□□ -2.12
PCNAP12004 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PCNAP12004 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.79□□□□□ -2.12
PCNAP12004 RNU6-801P-201ENST00000364087 105 ntBASIC1.79□□□□□ -2.12
PCNAP12004 SNORA16.1-201ENST00000364597 132 ntBASIC1.79□□□□□ -2.12
PCNAP12004 Y_RNA.368-201ENST00000365547 113 ntBASIC1.79□□□□□ -2.12
PCNAP12004 RNU6-662P-201ENST00000384253 104 ntBASIC1.79□□□□□ -2.12
PCNAP12004 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
PCNAP12004 SNORA53-201ENST00000391141 249 ntBASIC1.79□□□□□ -2.12
PCNAP12004 MIR934-201ENST00000401241 83 ntBASIC1.79□□□□□ -2.12
PCNAP12004 RNU2-38P-201ENST00000410856 79 ntBASIC1.79□□□□□ -2.12
PCNAP12004 AC003989.2-201ENST00000440224 169 ntBASIC1.79□□□□□ -2.12
PCNAP12004 SERF1AP1-201ENST00000514575 187 ntBASIC1.79□□□□□ -2.12
PCNAP12004 MIR3198-2-201ENST00000577868 80 ntBASIC1.79□□□□□ -2.12
PCNAP12004 MIR4503-201ENST00000582187 83 ntBASIC1.79□□□□□ -2.12
PCNAP12004 MIR8054-201ENST00000620877 86 ntBASIC1.79□□□□□ -2.12
PCNAP12004 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
PCNAP12004 AC134026.1-201ENST00000623249 2239 ntBASIC1.79□□□□□ -2.12
PCNAP12004 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.79□□□□□ -2.12
PCNAP12004 AL391987.6-201ENST00000305671 199 ntBASIC1.78□□□□□ -2.12
PCNAP12004 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
PCNAP12004 RNU4-13P-201ENST00000364019 141 ntBASIC1.78□□□□□ -2.12
PCNAP12004 RNU6-326P-201ENST00000365480 107 ntBASIC1.78□□□□□ -2.12
PCNAP12004 SNORA26.5-201ENST00000391215 123 ntBASIC1.78□□□□□ -2.12
PCNAP12004 AC024067.1-201ENST00000426199 223 ntBASIC1.78□□□□□ -2.12
PCNAP12004 HSPE1P21-201ENST00000438283 308 ntBASIC1.78□□□□□ -2.12
PCNAP12004 AC069257.2-201ENST00000441819 155 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms