Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNU7-12P-201ENST00000516030 62 ntBASIC0.62□□□□□ -2.31
CD28P10747 Y_RNA.682-201ENST00000516457 100 ntBASIC0.62□□□□□ -2.31
CD28P10747 RNU6-1291P-201ENST00000516591 104 ntBASIC0.62□□□□□ -2.31
CD28P10747 AL391903.3-201ENST00000612158 163 ntBASIC0.62□□□□□ -2.31
CD28P10747 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.62□□□□□ -2.31
CD28P10747 MIR3674-201ENST00000636576 68 ntBASIC0.62□□□□□ -2.31
CD28P10747 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CD28P10747 RNU1-133P-201ENST00000364867 167 ntBASIC0.61□□□□□ -2.31
CD28P10747 Y_RNA.358-201ENST00000365491 99 ntBASIC0.61□□□□□ -2.31
CD28P10747 RNU6-1105P-201ENST00000384774 107 ntBASIC0.61□□□□□ -2.31
CD28P10747 AC245047.8-201ENST00000456455 284 ntBASIC0.61□□□□□ -2.31
CD28P10747 SNORA40.9-201ENST00000515895 93 ntBASIC0.61□□□□□ -2.31
CD28P10747 AP003716.2-201ENST00000528260 108 ntBASIC0.61□□□□□ -2.31
CD28P10747 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.61□□□□□ -2.31
CD28P10747 AC133485.1-201ENST00000567176 124 ntBASIC0.61□□□□□ -2.31
CD28P10747 AC138907.6-201ENST00000568401 126 ntBASIC0.61□□□□□ -2.31
CD28P10747 AC012557.2-201ENST00000605919 418 ntBASIC0.61□□□□□ -2.31
CD28P10747 AL096861.1-201ENST00000610899 123 ntBASIC0.61□□□□□ -2.31
CD28P10747 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
CD28P10747 MIR6835-201ENST00000621552 64 ntBASIC0.61□□□□□ -2.31
CD28P10747 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.61□□□□□ -2.31
CD28P10747 U8.5-201ENST00000364528 136 ntBASIC0.6□□□□□ -2.31
CD28P10747 Y_RNA.336-201ENST00000365307 109 ntBASIC0.6□□□□□ -2.31
CD28P10747 Y_RNA.482-201ENST00000384377 111 ntBASIC0.6□□□□□ -2.31
CD28P10747 Y_RNA.498-201ENST00000384460 102 ntBASIC0.6□□□□□ -2.31
CD28P10747 SNORD115-47-201ENST00000391226 86 ntBASIC0.6□□□□□ -2.31
CD28P10747 MIR1277-201ENST00000408536 78 ntBASIC0.6□□□□□ -2.31
CD28P10747 MTND3P8-201ENST00000412909 339 ntBASIC0.6□□□□□ -2.31
CD28P10747 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.6□□□□□ -2.31
CD28P10747 AL589823.1-201ENST00000429577 183 ntBASIC0.6□□□□□ -2.31
CD28P10747 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.6□□□□□ -2.31
CD28P10747 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.6□□□□□ -2.31
CD28P10747 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.6□□□□□ -2.31
CD28P10747 LINC01399-202ENST00000458450 244 ntBASIC0.6□□□□□ -2.31
CD28P10747 RNU6-625P-201ENST00000459412 107 ntBASIC0.6□□□□□ -2.31
CD28P10747 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.6□□□□□ -2.31
CD28P10747 CYCTP-201ENST00000504253 315 ntBASIC0.6□□□□□ -2.31
CD28P10747 SCARNA16.2-201ENST00000516520 172 ntBASIC0.6□□□□□ -2.31
CD28P10747 Y_RNA.708-201ENST00000516950 96 ntBASIC0.6□□□□□ -2.31
CD28P10747 RNU6-1096P-201ENST00000517089 102 ntBASIC0.6□□□□□ -2.31
CD28P10747 MIR2355-201ENST00000517199 87 ntBASIC0.6□□□□□ -2.31
CD28P10747 RNU2-12P-201ENST00000517216 168 ntBASIC0.6□□□□□ -2.31
CD28P10747 AC022868.1-201ENST00000517767 391 ntBASIC0.6□□□□□ -2.31
CD28P10747 MIR4762-201ENST00000585261 75 ntBASIC0.6□□□□□ -2.31
CD28P10747 AC093913.1-201ENST00000614178 329 ntBASIC0.6□□□□□ -2.31
CD28P10747 AC106800.4-201ENST00000614905 153 ntBASIC0.6□□□□□ -2.31
CD28P10747 MIR6866-201ENST00000638146 69 ntBASIC0.6□□□□□ -2.31
CD28P10747 Y_RNA.36-201ENST00000362602 112 ntBASIC0.59□□□□□ -2.31
CD28P10747 RNU6-1301P-201ENST00000362724 104 ntBASIC0.59□□□□□ -2.31
CD28P10747 SNORD115-30-201ENST00000364117 82 ntBASIC0.59□□□□□ -2.31
CD28P10747 RNU6-879P-201ENST00000364328 108 ntBASIC0.59□□□□□ -2.31
CD28P10747 Y_RNA.318-201ENST00000365131 97 ntBASIC0.59□□□□□ -2.31
CD28P10747 Y_RNA.473-201ENST00000384333 102 ntBASIC0.59□□□□□ -2.31
CD28P10747 MIR508-201ENST00000384857 115 ntBASIC0.59□□□□□ -2.31
CD28P10747 SNORA75.2-201ENST00000391138 150 ntBASIC0.59□□□□□ -2.31
CD28P10747 SNORA75.3-201ENST00000391231 150 ntBASIC0.59□□□□□ -2.31
CD28P10747 MIR891A-201ENST00000401237 79 ntBASIC0.59□□□□□ -2.31
CD28P10747 MIR548F5-201ENST00000408421 86 ntBASIC0.59□□□□□ -2.31
CD28P10747 AC006461.1-201ENST00000412637 326 ntBASIC0.59□□□□□ -2.31
CD28P10747 AL162725.1-201ENST00000435405 301 ntBASIC0.59□□□□□ -2.31
CD28P10747 RPS3AP52-201ENST00000435639 297 ntBASIC0.59□□□□□ -2.31
CD28P10747 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.59□□□□□ -2.31
CD28P10747 AC104332.1-201ENST00000440471 797 ntBASIC0.59□□□□□ -2.31
CD28P10747 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.59□□□□□ -2.31
CD28P10747 PDCD5P2-201ENST00000507570 312 ntBASIC0.59□□□□□ -2.31
CD28P10747 AC011352.1-201ENST00000512300 793 ntBASIC0.59□□□□□ -2.31
CD28P10747 RNU6-351P-201ENST00000516097 100 ntBASIC0.59□□□□□ -2.31
CD28P10747 ACA64.5-201ENST00000516207 127 ntBASIC0.59□□□□□ -2.31
CD28P10747 RNU6-197P-201ENST00000516680 100 ntBASIC0.59□□□□□ -2.31
CD28P10747 AF235103.2-201ENST00000525753 346 ntBASIC0.59□□□□□ -2.31
CD28P10747 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.59□□□□□ -2.31
CD28P10747 AC005899.2-201ENST00000584353 90 ntBASIC0.59□□□□□ -2.31
CD28P10747 MIR4653-201ENST00000585107 83 ntBASIC0.59□□□□□ -2.31
CD28P10747 AC120024.3-201ENST00000603167 156 ntBASIC0.59□□□□□ -2.31
CD28P10747 AC002553.4-201ENST00000616896 331 ntBASIC0.59□□□□□ -2.31
CD28P10747 CASC19-280ENST00000642102 1351 ntBASIC0.58□□□□□ -2.32
CD28P10747 Y_RNA.2-201ENST00000362330 96 ntBASIC0.58□□□□□ -2.32
CD28P10747 SNORD114-26-201ENST00000363543 72 ntBASIC0.58□□□□□ -2.32
CD28P10747 Y_RNA.404-201ENST00000383978 102 ntBASIC0.58□□□□□ -2.32
CD28P10747 RNU6-1310P-201ENST00000384153 107 ntBASIC0.58□□□□□ -2.32
CD28P10747 MIR146A-201ENST00000385201 99 ntBASIC0.58□□□□□ -2.32
CD28P10747 RNA5SP475-201ENST00000410568 110 ntBASIC0.58□□□□□ -2.32
CD28P10747 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.58□□□□□ -2.32
CD28P10747 RNU7-90P-201ENST00000459216 62 ntBASIC0.58□□□□□ -2.32
CD28P10747 RNU7-87P-201ENST00000459343 62 ntBASIC0.58□□□□□ -2.32
CD28P10747 SNORD111.1-201ENST00000516421 86 ntBASIC0.58□□□□□ -2.32
CD28P10747 RNU6-1116P-201ENST00000517269 99 ntBASIC0.58□□□□□ -2.32
CD28P10747 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.58□□□□□ -2.32
CD28P10747 AC009229.3-201ENST00000608056 282 ntBASIC0.58□□□□□ -2.32
CD28P10747 AL008636.1-201ENST00000625038 1018 ntBASIC0.58□□□□□ -2.32
CD28P10747 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
CD28P10747 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
CD28P10747 Y_RNA.86-201ENST00000363020 111 ntBASIC0.57□□□□□ -2.32
CD28P10747 Y_RNA.88-201ENST00000363029 99 ntBASIC0.57□□□□□ -2.32
CD28P10747 SNORD116-13-201ENST00000384408 92 ntBASIC0.57□□□□□ -2.32
CD28P10747 RNU6-1215P-201ENST00000384441 102 ntBASIC0.57□□□□□ -2.32
CD28P10747 RNU6-601P-201ENST00000384540 107 ntBASIC0.57□□□□□ -2.32
CD28P10747 MIR608-201ENST00000384820 100 ntBASIC0.57□□□□□ -2.32
CD28P10747 MIR100-201ENST00000385259 80 ntBASIC0.57□□□□□ -2.32
CD28P10747 MIR548F1-201ENST00000408667 84 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms