Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 RNU2-48P-201ENST00000410694 191 ntBASIC3.32□□□□□ -1.88
RARAP10276 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.32□□□□□ -1.88
RARAP10276 RPS15AP28-201ENST00000435088 386 ntBASIC3.32□□□□□ -1.88
RARAP10276 AC233266.1-201ENST00000454518 96 ntBASIC3.32□□□□□ -1.88
RARAP10276 RNU6-1146P-201ENST00000516282 102 ntBASIC3.32□□□□□ -1.88
RARAP10276 Y_RNA.677-201ENST00000516401 85 ntBASIC3.32□□□□□ -1.88
RARAP10276 RNU6-1291P-201ENST00000516591 104 ntBASIC3.32□□□□□ -1.88
RARAP10276 RNU6-113P-201ENST00000516653 101 ntBASIC3.32□□□□□ -1.88
RARAP10276 SNORA48.11-201ENST00000517015 89 ntBASIC3.32□□□□□ -1.88
RARAP10276 AC007229.1-201ENST00000590455 412 ntBASIC3.32□□□□□ -1.88
RARAP10276 AC242852.1-201ENST00000612151 96 ntBASIC3.32□□□□□ -1.88
RARAP10276 uc_338.25-201ENST00000613756 156 ntBASIC3.32□□□□□ -1.88
RARAP10276 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.32□□□□□ -1.88
RARAP10276 MIR7975-201ENST00000619350 68 ntBASIC3.32□□□□□ -1.88
RARAP10276 AC244015.1-201ENST00000622301 99 ntBASIC3.32□□□□□ -1.88
RARAP10276 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.32□□□□□ -1.88
RARAP10276 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RARAP10276 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RARAP10276 SNORA46-201ENST00000384762 135 ntBASIC3.31□□□□□ -1.88
RARAP10276 MIR34B-201ENST00000385076 84 ntBASIC3.31□□□□□ -1.88
RARAP10276 RNU6-554P-201ENST00000410466 106 ntBASIC3.31□□□□□ -1.88
RARAP10276 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.31□□□□□ -1.88
RARAP10276 AC011406.1-201ENST00000512440 370 ntBASIC3.31□□□□□ -1.88
RARAP10276 Y_RNA.666-201ENST00000516187 112 ntBASIC3.31□□□□□ -1.88
RARAP10276 RNU6-1149P-201ENST00000516810 97 ntBASIC3.31□□□□□ -1.88
RARAP10276 RNU6-537P-201ENST00000517277 103 ntBASIC3.31□□□□□ -1.88
RARAP10276 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.31□□□□□ -1.88
RARAP10276 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.31□□□□□ -1.88
RARAP10276 SNORA50A-202ENST00000629536 136 ntBASIC3.31□□□□□ -1.88
RARAP10276 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
RARAP10276 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RARAP10276 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RARAP10276 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RARAP10276 RNU6-1107P-201ENST00000364817 104 ntBASIC3.3□□□□□ -1.88
RARAP10276 RNA5SP125-201ENST00000364843 120 ntBASIC3.3□□□□□ -1.88
RARAP10276 Y_RNA.369-201ENST00000365568 117 ntBASIC3.3□□□□□ -1.88
RARAP10276 MIR570-201ENST00000384917 97 ntBASIC3.3□□□□□ -1.88
RARAP10276 SNORD77.3-201ENST00000391113 65 ntBASIC3.3□□□□□ -1.88
RARAP10276 RNU11-5P-201ENST00000391216 129 ntBASIC3.3□□□□□ -1.88
RARAP10276 RNA5SP136-201ENST00000410906 107 ntBASIC3.3□□□□□ -1.88
RARAP10276 CYP2C59P-201ENST00000457790 269 ntBASIC3.3□□□□□ -1.88
RARAP10276 CKS1BP2-201ENST00000497342 240 ntBASIC3.3□□□□□ -1.88
RARAP10276 RNA5SP385-201ENST00000515947 110 ntBASIC3.3□□□□□ -1.88
RARAP10276 SCARNA15-202ENST00000516881 127 ntBASIC3.3□□□□□ -1.88
RARAP10276 AC007012.1-201ENST00000567192 175 ntBASIC3.3□□□□□ -1.88
RARAP10276 AL356280.1-201ENST00000603614 379 ntBASIC3.3□□□□□ -1.88
RARAP10276 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.3□□□□□ -1.88
RARAP10276 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RARAP10276 AC018630.2-201ENST00000534866 2403 ntBASIC3.3□□□□□ -1.88
RARAP10276 CD24P4-201ENST00000382840 243 ntBASIC3.29□□□□□ -1.88
RARAP10276 AC007064.1-201ENST00000412238 351 ntBASIC3.29□□□□□ -1.88
RARAP10276 AL049873.1-201ENST00000480540 376 ntBASIC3.29□□□□□ -1.88
RARAP10276 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.29□□□□□ -1.88
RARAP10276 SEM1P1-201ENST00000506694 209 ntBASIC3.29□□□□□ -1.88
RARAP10276 SCGB1D5P-201ENST00000515134 247 ntBASIC3.29□□□□□ -1.88
RARAP10276 RNU6-693P-201ENST00000516134 107 ntBASIC3.29□□□□□ -1.88
RARAP10276 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.29□□□□□ -1.88
RARAP10276 MIR4506-201ENST00000584693 77 ntBASIC3.29□□□□□ -1.88
RARAP10276 AC106754.2-201ENST00000623006 233 ntBASIC3.29□□□□□ -1.88
RARAP10276 MIR6079-201ENST00000635807 62 ntBASIC3.29□□□□□ -1.88
RARAP10276 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RARAP10276 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RARAP10276 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.28□□□□□ -1.88
RARAP10276 Y_RNA.85-201ENST00000363014 111 ntBASIC3.28□□□□□ -1.88
RARAP10276 SNORA68.1-201ENST00000364537 132 ntBASIC3.28□□□□□ -1.88
RARAP10276 MIR591-201ENST00000385290 95 ntBASIC3.28□□□□□ -1.88
RARAP10276 RN7SKP123-201ENST00000410732 291 ntBASIC3.28□□□□□ -1.88
RARAP10276 SNRPGP13-201ENST00000442212 177 ntBASIC3.28□□□□□ -1.88
RARAP10276 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.28□□□□□ -1.88
RARAP10276 COX6CP6-201ENST00000490840 228 ntBASIC3.28□□□□□ -1.88
RARAP10276 RNU6-341P-201ENST00000516973 96 ntBASIC3.28□□□□□ -1.88
RARAP10276 MIR5195-201ENST00000583555 115 ntBASIC3.28□□□□□ -1.88
RARAP10276 AL137067.1-201ENST00000615933 120 ntBASIC3.28□□□□□ -1.88
RARAP10276 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RARAP10276 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RARAP10276 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
RARAP10276 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RARAP10276 Y_RNA.366-201ENST00000365540 102 ntBASIC3.27□□□□□ -1.89
RARAP10276 MIR518F-201ENST00000384973 87 ntBASIC3.27□□□□□ -1.89
RARAP10276 SNORD12C-201ENST00000386307 89 ntBASIC3.27□□□□□ -1.89
RARAP10276 RNA5SP467-201ENST00000391274 118 ntBASIC3.27□□□□□ -1.89
RARAP10276 RNY4P30-201ENST00000410216 95 ntBASIC3.27□□□□□ -1.89
RARAP10276 AC005326.1-201ENST00000429197 123 ntBASIC3.27□□□□□ -1.89
RARAP10276 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.27□□□□□ -1.89
RARAP10276 UQCRHP3-201ENST00000451503 251 ntBASIC3.27□□□□□ -1.89
RARAP10276 RN7SKP282-201ENST00000516824 299 ntBASIC3.27□□□□□ -1.89
RARAP10276 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.27□□□□□ -1.89
RARAP10276 AL358944.1-201ENST00000528537 144 ntBASIC3.27□□□□□ -1.89
RARAP10276 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.27□□□□□ -1.89
RARAP10276 AL359075.3-201ENST00000613288 217 ntBASIC3.27□□□□□ -1.89
RARAP10276 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.27□□□□□ -1.89
RARAP10276 MIR338-201ENST00000636369 67 ntBASIC3.27□□□□□ -1.89
RARAP10276 MIR376A2-201ENST00000636782 80 ntBASIC3.27□□□□□ -1.89
RARAP10276 U6.108-201ENST00000637764 58 ntBASIC3.27□□□□□ -1.89
RARAP10276 MAPK10-362ENST00000641864 4484 ntBASIC3.27□□□□□ -1.89
RARAP10276 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RARAP10276 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RARAP10276 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.26□□□□□ -1.89
RARAP10276 ZNF271P-202ENST00000465539 1970 ntBASIC3.26□□□□□ -1.89
RARAP10276 MIR126-201ENST00000362291 85 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms