Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.33□□□□□ -2.36
UBCP0CG48 USP9YP30-201ENST00000430729 455 ntBASIC0.33□□□□□ -2.36
UBCP0CG48 AL392103.1-201ENST00000447000 198 ntBASIC0.33□□□□□ -2.36
UBCP0CG48 RNU6-864P-201ENST00000516256 108 ntBASIC0.33□□□□□ -2.36
UBCP0CG48 RNU6-229P-201ENST00000516614 102 ntBASIC0.33□□□□□ -2.36
UBCP0CG48 RNU1-54P-201ENST00000517181 120 ntBASIC0.33□□□□□ -2.36
UBCP0CG48 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.33□□□□□ -2.36
UBCP0CG48 MIR1321-201ENST00000637766 79 ntBASIC0.33□□□□□ -2.36
UBCP0CG48 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.33□□□□□ -2.36
UBCP0CG48 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
UBCP0CG48 Y_RNA.38-201ENST00000362617 102 ntBASIC0.32□□□□□ -2.36
UBCP0CG48 RNU6-879P-201ENST00000364328 108 ntBASIC0.32□□□□□ -2.36
UBCP0CG48 SNORD114-22-201ENST00000365423 72 ntBASIC0.32□□□□□ -2.36
UBCP0CG48 RNU6-842P-201ENST00000384269 107 ntBASIC0.32□□□□□ -2.36
UBCP0CG48 MTND1P4-201ENST00000435196 415 ntBASIC0.32□□□□□ -2.36
UBCP0CG48 SNORD5.1-201ENST00000458800 75 ntBASIC0.32□□□□□ -2.36
UBCP0CG48 RPS29P1-201ENST00000465274 159 ntBASIC0.32□□□□□ -2.36
UBCP0CG48 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.32□□□□□ -2.36
UBCP0CG48 AL512605.2-201ENST00000592972 256 ntBASIC0.32□□□□□ -2.36
UBCP0CG48 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.32□□□□□ -2.36
UBCP0CG48 MIR5087-201ENST00000635826 76 ntBASIC0.32□□□□□ -2.36
UBCP0CG48 AC134026.1-201ENST00000623249 2239 ntBASIC0.32□□□□□ -2.36
UBCP0CG48 Y_RNA.48-201ENST00000362710 103 ntBASIC0.31□□□□□ -2.36
UBCP0CG48 SNORD116-9-201ENST00000384000 95 ntBASIC0.31□□□□□ -2.36
UBCP0CG48 RNU6-1310P-201ENST00000384153 107 ntBASIC0.31□□□□□ -2.36
UBCP0CG48 SNORD116-3-201ENST00000384287 95 ntBASIC0.31□□□□□ -2.36
UBCP0CG48 SNORD116-7-201ENST00000384404 95 ntBASIC0.31□□□□□ -2.36
UBCP0CG48 SNORD116-5-201ENST00000384462 95 ntBASIC0.31□□□□□ -2.36
UBCP0CG48 RNU6-177P-201ENST00000411257 104 ntBASIC0.31□□□□□ -2.36
UBCP0CG48 RNU6-1304P-201ENST00000411374 106 ntBASIC0.31□□□□□ -2.36
UBCP0CG48 MTCO2P12-201ENST00000427426 682 ntBASIC0.31□□□□□ -2.36
UBCP0CG48 RNU4-57P-201ENST00000515980 135 ntBASIC0.31□□□□□ -2.36
UBCP0CG48 AC093027.1-201ENST00000546698 429 ntBASIC0.31□□□□□ -2.36
UBCP0CG48 MIR6504-201ENST00000613520 61 ntBASIC0.31□□□□□ -2.36
UBCP0CG48 MIR6516-201ENST00000630554 81 ntBASIC0.31□□□□□ -2.36
UBCP0CG48 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.3□□□□□ -2.36
UBCP0CG48 MIR1-1-201ENST00000362147 71 ntBASIC0.3□□□□□ -2.36
UBCP0CG48 Y_RNA.557-201ENST00000384680 107 ntBASIC0.3□□□□□ -2.36
UBCP0CG48 MIR140-201ENST00000385282 100 ntBASIC0.3□□□□□ -2.36
UBCP0CG48 RNU6-700P-201ENST00000391043 107 ntBASIC0.3□□□□□ -2.36
UBCP0CG48 RNU6-373P-201ENST00000411247 98 ntBASIC0.3□□□□□ -2.36
UBCP0CG48 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
UBCP0CG48 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.3□□□□□ -2.36
UBCP0CG48 RNU7-87P-201ENST00000459343 62 ntBASIC0.3□□□□□ -2.36
UBCP0CG48 SNORD123-201ENST00000459473 70 ntBASIC0.3□□□□□ -2.36
UBCP0CG48 SNORA40.9-201ENST00000515895 93 ntBASIC0.3□□□□□ -2.36
UBCP0CG48 SNORD45.4-201ENST00000516629 73 ntBASIC0.3□□□□□ -2.36
UBCP0CG48 AC105029.1-201ENST00000520250 669 ntBASIC0.3□□□□□ -2.36
UBCP0CG48 MIR4300-201ENST00000581016 96 ntBASIC0.3□□□□□ -2.36
UBCP0CG48 AC104695.3-201ENST00000604052 296 ntBASIC0.3□□□□□ -2.36
UBCP0CG48 MIR6788-201ENST00000618842 66 ntBASIC0.3□□□□□ -2.36
UBCP0CG48 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.3□□□□□ -2.36
UBCP0CG48 AC100810.6-201ENST00000638068 285 ntBASIC0.3□□□□□ -2.36
UBCP0CG48 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
UBCP0CG48 RNY1P16-201ENST00000363063 111 ntBASIC0.29□□□□□ -2.36
UBCP0CG48 MIR522-201ENST00000385071 87 ntBASIC0.29□□□□□ -2.36
UBCP0CG48 MIR1302-7-201ENST00000408841 72 ntBASIC0.29□□□□□ -2.36
UBCP0CG48 HMGN2P32-201ENST00000444648 269 ntBASIC0.29□□□□□ -2.36
UBCP0CG48 MTND1P1-201ENST00000445453 368 ntBASIC0.29□□□□□ -2.36
UBCP0CG48 MTND1P17-201ENST00000448961 204 ntBASIC0.29□□□□□ -2.36
UBCP0CG48 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.29□□□□□ -2.36
UBCP0CG48 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.29□□□□□ -2.36
UBCP0CG48 SNORA68.3-201ENST00000515906 83 ntBASIC0.29□□□□□ -2.36
UBCP0CG48 RNU6-1337P-201ENST00000516525 95 ntBASIC0.29□□□□□ -2.36
UBCP0CG48 AC022616.4-201ENST00000522985 181 ntBASIC0.29□□□□□ -2.36
UBCP0CG48 RNU6-1084P-201ENST00000362498 107 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 Y_RNA.191-201ENST00000363972 113 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 RNU6-654P-201ENST00000364373 107 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 Y_RNA.253-201ENST00000364562 112 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 RNU6-1013P-201ENST00000384180 107 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 RNU6-342P-201ENST00000384521 104 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 SNORA2B-201ENST00000384583 137 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 RNU6-613P-201ENST00000410412 108 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 AC098934.3-201ENST00000430450 190 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.28□□□□□ -2.36
UBCP0CG48 MTND1P26-201ENST00000440488 538 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 AC105313.1-201ENST00000509121 353 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 RNU6-1088P-201ENST00000516850 104 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 RNU6-273P-201ENST00000516937 96 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 MTND2P38-201ENST00000522536 667 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 MIR151B-201ENST00000584249 96 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 MIR6128-201ENST00000615528 109 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 AC090617.10-201ENST00000624308 134 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.28□□□□□ -2.36
UBCP0CG48 MIR4251-201ENST00000635819 61 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 MIR3662-201ENST00000637030 95 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 AC024614.3-201ENST00000637860 256 ntBASIC0.28□□□□□ -2.36
UBCP0CG48 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
UBCP0CG48 AC090625.1-201ENST00000357130 210 ntBASIC0.27□□□□□ -2.37
UBCP0CG48 MIRLET7D-201ENST00000362263 87 ntBASIC0.27□□□□□ -2.37
UBCP0CG48 SNORD115-30-201ENST00000364117 82 ntBASIC0.27□□□□□ -2.37
UBCP0CG48 snoU2-30.1-201ENST00000365012 70 ntBASIC0.27□□□□□ -2.37
UBCP0CG48 RNY1P8-201ENST00000383970 114 ntBASIC0.27□□□□□ -2.37
UBCP0CG48 MIR548J-201ENST00000408833 112 ntBASIC0.27□□□□□ -2.37
UBCP0CG48 AL390729.2-201ENST00000416137 156 ntBASIC0.27□□□□□ -2.37
UBCP0CG48 AC005534.2-201ENST00000431047 433 ntBASIC0.27□□□□□ -2.37
UBCP0CG48 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.27□□□□□ -2.37
UBCP0CG48 RNU6-566P-201ENST00000516790 107 ntBASIC0.27□□□□□ -2.37
UBCP0CG48 MIR5000-201ENST00000577717 103 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms