Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.13□□□□□ -2.07
HOXC6P09630 AC068700.1-201ENST00000565862 3754 ntBASIC2.13□□□□□ -2.07
HOXC6P09630 Y_RNA.29-201ENST00000362570 113 ntBASIC2.12□□□□□ -2.07
HOXC6P09630 Y_RNA.124-201ENST00000363339 93 ntBASIC2.12□□□□□ -2.07
HOXC6P09630 RNA5SP125-201ENST00000364843 120 ntBASIC2.12□□□□□ -2.07
HOXC6P09630 SNORD31B-201ENST00000364977 69 ntBASIC2.12□□□□□ -2.07
HOXC6P09630 RNU6-438P-201ENST00000365561 103 ntBASIC2.12□□□□□ -2.07
HOXC6P09630 RNU6-975P-201ENST00000384296 105 ntBASIC2.12□□□□□ -2.07
HOXC6P09630 MIR95-201ENST00000385072 81 ntBASIC2.12□□□□□ -2.07
HOXC6P09630 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HOXC6P09630 AL627390.1-201ENST00000396055 340 ntBASIC2.12□□□□□ -2.07
HOXC6P09630 MIR300-201ENST00000401138 83 ntBASIC2.12□□□□□ -2.07
HOXC6P09630 BTF3P11-201ENST00000426582 477 ntBASIC2.12□□□□□ -2.07
HOXC6P09630 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HOXC6P09630 SNORA25.15-201ENST00000516487 89 ntBASIC2.12□□□□□ -2.07
HOXC6P09630 AC022616.8-201ENST00000533569 253 ntBASIC2.12□□□□□ -2.07
HOXC6P09630 AC018630.3-201ENST00000542637 96 ntBASIC2.12□□□□□ -2.07
HOXC6P09630 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXC6P09630 AL355297.2-201ENST00000604792 129 ntBASIC2.12□□□□□ -2.07
HOXC6P09630 AC245884.12-201ENST00000615364 59 ntBASIC2.12□□□□□ -2.07
HOXC6P09630 RNU6-661P-201ENST00000362409 107 ntBASIC2.11□□□□□ -2.07
HOXC6P09630 Y_RNA.308-201ENST00000365043 101 ntBASIC2.11□□□□□ -2.07
HOXC6P09630 RNU6-763P-201ENST00000390865 106 ntBASIC2.11□□□□□ -2.07
HOXC6P09630 SNORA26.5-201ENST00000391215 123 ntBASIC2.11□□□□□ -2.07
HOXC6P09630 RNA5SP338-201ENST00000410495 85 ntBASIC2.11□□□□□ -2.07
HOXC6P09630 Y_RNA.793-201ENST00000411222 111 ntBASIC2.11□□□□□ -2.07
HOXC6P09630 BTF3P4-201ENST00000418852 495 ntBASIC2.11□□□□□ -2.07
HOXC6P09630 AL138752.1-201ENST00000452964 351 ntBASIC2.11□□□□□ -2.07
HOXC6P09630 SNORD2.1-201ENST00000458762 69 ntBASIC2.11□□□□□ -2.07
HOXC6P09630 SNORD65B-201ENST00000459126 73 ntBASIC2.11□□□□□ -2.07
HOXC6P09630 AC079804.2-201ENST00000490376 200 ntBASIC2.11□□□□□ -2.07
HOXC6P09630 RNA5SP490-201ENST00000517141 136 ntBASIC2.11□□□□□ -2.07
HOXC6P09630 CBX3P4-201ENST00000538909 354 ntBASIC2.11□□□□□ -2.07
HOXC6P09630 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.11□□□□□ -2.07
HOXC6P09630 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.11□□□□□ -2.07
HOXC6P09630 AC009127.3-201ENST00000570531 403 ntBASIC2.11□□□□□ -2.07
HOXC6P09630 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.11□□□□□ -2.07
HOXC6P09630 MIR6840-201ENST00000611937 71 ntBASIC2.11□□□□□ -2.07
HOXC6P09630 AL365265.1-201ENST00000621045 234 ntBASIC2.11□□□□□ -2.07
HOXC6P09630 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
HOXC6P09630 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
HOXC6P09630 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
HOXC6P09630 SNORA20B-201ENST00000384220 132 ntBASIC2.1□□□□□ -2.07
HOXC6P09630 SNORA67.5-201ENST00000391036 107 ntBASIC2.1□□□□□ -2.07
HOXC6P09630 RN7SKP51-201ENST00000410781 304 ntBASIC2.1□□□□□ -2.07
HOXC6P09630 RNU6-321P-201ENST00000410912 106 ntBASIC2.1□□□□□ -2.07
HOXC6P09630 COX6CP10-201ENST00000416832 224 ntBASIC2.1□□□□□ -2.07
HOXC6P09630 AC016925.1-201ENST00000458303 298 ntBASIC2.1□□□□□ -2.07
HOXC6P09630 AC018868.1-201ENST00000491307 315 ntBASIC2.1□□□□□ -2.07
HOXC6P09630 RPS29P11-201ENST00000496507 171 ntBASIC2.1□□□□□ -2.07
HOXC6P09630 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.1□□□□□ -2.07
HOXC6P09630 AC002984.1-201ENST00000591692 448 ntBASIC2.1□□□□□ -2.07
HOXC6P09630 AC073349.3-201ENST00000617616 186 ntBASIC2.1□□□□□ -2.07
HOXC6P09630 snoZ196.1-201ENST00000625269 89 ntBASIC2.1□□□□□ -2.07
HOXC6P09630 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.1□□□□□ -2.07
HOXC6P09630 WWP1P1-201ENST00000466609 2769 ntBASIC2.1□□□□□ -2.07
HOXC6P09630 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
HOXC6P09630 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.09□□□□□ -2.07
HOXC6P09630 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HOXC6P09630 RNU6-1272P-201ENST00000362776 107 ntBASIC2.09□□□□□ -2.07
HOXC6P09630 RNU6-493P-201ENST00000391321 108 ntBASIC2.09□□□□□ -2.07
HOXC6P09630 RNA5SP270-201ENST00000411361 118 ntBASIC2.09□□□□□ -2.07
HOXC6P09630 CYP2C59P-201ENST00000457790 269 ntBASIC2.09□□□□□ -2.07
HOXC6P09630 RNU6-221P-201ENST00000459541 99 ntBASIC2.09□□□□□ -2.07
HOXC6P09630 AC010531.2-201ENST00000465012 153 ntBASIC2.09□□□□□ -2.07
HOXC6P09630 AC090255.1-201ENST00000495779 349 ntBASIC2.09□□□□□ -2.07
HOXC6P09630 AP002392.1-201ENST00000537692 208 ntBASIC2.09□□□□□ -2.07
HOXC6P09630 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.09□□□□□ -2.07
HOXC6P09630 AC098479.1-201ENST00000609225 154 ntBASIC2.09□□□□□ -2.07
HOXC6P09630 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.09□□□□□ -2.07
HOXC6P09630 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
HOXC6P09630 RNU4-10P-201ENST00000364383 140 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 MTCO2P33-201ENST00000402100 465 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 RNU6-855P-201ENST00000410395 104 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 AC016909.1-201ENST00000415916 166 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 AP1B1P2-201ENST00000416196 106 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.08□□□□□ -2.08
HOXC6P09630 AC074198.2-201ENST00000508153 258 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 AC093259.1-201ENST00000509755 300 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 RNU6-948P-201ENST00000516374 107 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 RNU6-861P-201ENST00000516745 106 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 Y_RNA.700-201ENST00000516806 100 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 SNORA48.11-201ENST00000517015 89 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 RNU6-667P-201ENST00000517186 102 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 AC025647.1-201ENST00000517879 253 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 AC136628.3-201ENST00000521868 290 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 AC087441.2-201ENST00000529141 262 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.08□□□□□ -2.08
HOXC6P09630 MIR4308-201ENST00000580634 81 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 U4atac.1-201ENST00000618345 95 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 FTX_2.1-201ENST00000618816 94 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 AP000553.5-201ENST00000641933 54 ntBASIC2.08□□□□□ -2.08
HOXC6P09630 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
HOXC6P09630 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.07□□□□□ -2.08
HOXC6P09630 MIR340-201ENST00000362125 95 ntBASIC2.07□□□□□ -2.08
HOXC6P09630 Y_RNA.310-201ENST00000365063 113 ntBASIC2.07□□□□□ -2.08
HOXC6P09630 RNU6-407P-201ENST00000365280 104 ntBASIC2.07□□□□□ -2.08
HOXC6P09630 Y_RNA.341-201ENST00000365341 102 ntBASIC2.07□□□□□ -2.08
HOXC6P09630 RNA5SP240-201ENST00000365355 128 ntBASIC2.07□□□□□ -2.08
HOXC6P09630 Y_RNA.361-201ENST00000365515 120 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms