Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
ITGB1P05556 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ITGB1P05556 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ITGB1P05556 RNU1-23P-201ENST00000363361 144 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 U8.7-201ENST00000364940 136 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 RNU6-546P-201ENST00000383991 107 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 SNORD14D-201ENST00000384390 87 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 MIR616-201ENST00000385293 97 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 MIR526A2-201ENST00000390198 65 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 RNU6-1168P-201ENST00000390831 104 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 RNU6-220P-201ENST00000390919 107 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 RNU6-383P-201ENST00000410864 94 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 AC006461.1-201ENST00000412637 326 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 HSPE1P21-201ENST00000438283 308 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.63□□□□□ -1.99
ITGB1P05556 AC074290.1-201ENST00000448883 135 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 AL137159.1-201ENST00000452808 512 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 CYP2C59P-201ENST00000457790 269 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 RNU7-57P-201ENST00000459540 60 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 AC117454.1-201ENST00000491120 168 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 SNORA70.12-201ENST00000516084 153 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 RNU6-965P-201ENST00000516721 96 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.63□□□□□ -1.99
ITGB1P05556 AC004486.1-201ENST00000546846 233 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.63□□□□□ -1.99
ITGB1P05556 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.63□□□□□ -1.99
ITGB1P05556 AC046143.2-201ENST00000609789 160 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 snoZ196.1-201ENST00000625269 89 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.63□□□□□ -1.99
ITGB1P05556 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
ITGB1P05556 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ITGB1P05556 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ITGB1P05556 AC009487.4-201ENST00000624969 3585 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ITGB1P05556 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.62□□□□□ -1.99
ITGB1P05556 Y_RNA.229-201ENST00000364347 113 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 SNORD50B-201ENST00000364995 70 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 SNORD116-13-201ENST00000384408 92 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 RNU6-1072P-201ENST00000384703 107 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 RNU6-443P-201ENST00000384780 107 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 MIR524-201ENST00000385242 87 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 RNU2-32P-201ENST00000411193 191 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.62□□□□□ -1.99
ITGB1P05556 AC104389.3-201ENST00000445629 235 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 RNU7-26P-201ENST00000458980 63 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 RNU6-221P-201ENST00000459541 99 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.62□□□□□ -1.99
ITGB1P05556 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.62□□□□□ -1.99
ITGB1P05556 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.62□□□□□ -1.99
ITGB1P05556 AC015712.3-201ENST00000559380 164 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 MIR1273D-201ENST00000577266 86 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 MIR3670-2-201ENST00000582974 65 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 MIR3616-201ENST00000584070 92 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 MIR3670-1-201ENST00000584160 65 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 MIR3670-3-201ENST00000584855 65 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 DNAJC19P2-201ENST00000593340 302 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 MIR3670-4-201ENST00000612260 65 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.62□□□□□ -1.99
ITGB1P05556 AC068647.2-201ENST00000637380 353 ntBASIC2.62□□□□□ -1.99
ITGB1P05556 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ITGB1P05556 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ITGB1P05556 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
ITGB1P05556 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ITGB1P05556 SNORD114-7-201ENST00000362520 77 ntBASIC2.61□□□□□ -1.99
ITGB1P05556 RNA5SP456-201ENST00000364002 114 ntBASIC2.61□□□□□ -1.99
ITGB1P05556 SNORA20B-201ENST00000384220 132 ntBASIC2.61□□□□□ -1.99
ITGB1P05556 SNORA40-201ENST00000388090 126 ntBASIC2.61□□□□□ -1.99
ITGB1P05556 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
ITGB1P05556 AL606845.1-201ENST00000404881 255 ntBASIC2.61□□□□□ -1.99
ITGB1P05556 RNU2-48P-201ENST00000410694 191 ntBASIC2.61□□□□□ -1.99
ITGB1P05556 MTND4LP9-201ENST00000427694 174 ntBASIC2.61□□□□□ -1.99
ITGB1P05556 AL591806.2-201ENST00000433122 173 ntBASIC2.61□□□□□ -1.99
ITGB1P05556 RPL23AP7-203ENST00000449021 469 ntBASIC2.61□□□□□ -1.99
ITGB1P05556 AL121914.1-201ENST00000450188 156 ntBASIC2.61□□□□□ -1.99
ITGB1P05556 RNA5SP281-201ENST00000516504 135 ntBASIC2.61□□□□□ -1.99
ITGB1P05556 RNU6-1337P-201ENST00000516525 95 ntBASIC2.61□□□□□ -1.99
ITGB1P05556 RNU6-971P-201ENST00000516920 106 ntBASIC2.61□□□□□ -1.99
ITGB1P05556 PRELID2P1-201ENST00000552837 301 ntBASIC2.61□□□□□ -1.99
ITGB1P05556 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.61□□□□□ -1.99
ITGB1P05556 MIR4724-201ENST00000579485 89 ntBASIC2.61□□□□□ -1.99
ITGB1P05556 AC103810.6-201ENST00000606708 136 ntBASIC2.61□□□□□ -1.99
ITGB1P05556 AL391903.3-201ENST00000612158 163 ntBASIC2.61□□□□□ -1.99
ITGB1P05556 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
ITGB1P05556 AL159152.1-201ENST00000635019 2587 ntBASIC2.61□□□□□ -1.99
ITGB1P05556 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ITGB1P05556 MIR367-201ENST00000362299 68 ntBASIC2.6□□□□□ -1.99
ITGB1P05556 SNORA38-201ENST00000363946 132 ntBASIC2.6□□□□□ -1.99
ITGB1P05556 Y_RNA.261-201ENST00000364631 102 ntBASIC2.6□□□□□ -1.99
ITGB1P05556 RNU6-407P-201ENST00000365280 104 ntBASIC2.6□□□□□ -1.99
ITGB1P05556 MIR15B-201ENST00000385045 98 ntBASIC2.6□□□□□ -1.99
ITGB1P05556 MIR513C-201ENST00000401352 84 ntBASIC2.6□□□□□ -1.99
ITGB1P05556 AC016717.1-201ENST00000448918 286 ntBASIC2.6□□□□□ -1.99
ITGB1P05556 HMGN2P18-201ENST00000450680 270 ntBASIC2.6□□□□□ -1.99
ITGB1P05556 AC027419.1-201ENST00000522976 328 ntBASIC2.6□□□□□ -1.99
ITGB1P05556 DEFB122-202ENST00000569013 197 ntBASIC2.6□□□□□ -1.99
ITGB1P05556 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.6□□□□□ -1.99
ITGB1P05556 MIR548AY-201ENST00000617669 107 ntBASIC2.6□□□□□ -1.99
ITGB1P05556 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.6□□□□□ -1.99
ITGB1P05556 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 262.9 ms