Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.16□□□□□ -1.9
PDGFAP04085 AF228730.3-201ENST00000436691 102 ntBASIC3.16□□□□□ -1.9
PDGFAP04085 AL163195.1-201ENST00000496941 348 ntBASIC3.16□□□□□ -1.9
PDGFAP04085 RNU6-1270P-201ENST00000517128 108 ntBASIC3.16□□□□□ -1.9
PDGFAP04085 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.16□□□□□ -1.9
PDGFAP04085 MIR5004-201ENST00000579078 107 ntBASIC3.16□□□□□ -1.9
PDGFAP04085 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDGFAP04085 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDGFAP04085 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PDGFAP04085 AL136360.1-201ENST00000503377 1900 ntBASIC3.15□□□□□ -1.9
PDGFAP04085 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PDGFAP04085 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
PDGFAP04085 Z83843.1-201ENST00000604070 3685 ntBASIC3.15□□□□□ -1.91
PDGFAP04085 RNU6-23P-201ENST00000363283 107 ntBASIC3.15□□□□□ -1.91
PDGFAP04085 RNU6-309P-201ENST00000364573 106 ntBASIC3.15□□□□□ -1.91
PDGFAP04085 SNORA1-201ENST00000384107 130 ntBASIC3.15□□□□□ -1.91
PDGFAP04085 MIR522-201ENST00000385071 87 ntBASIC3.15□□□□□ -1.91
PDGFAP04085 SNRPGP13-201ENST00000442212 177 ntBASIC3.15□□□□□ -1.91
PDGFAP04085 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.15□□□□□ -1.91
PDGFAP04085 S100A11P2-201ENST00000467589 312 ntBASIC3.15□□□□□ -1.91
PDGFAP04085 RNA5SP341-201ENST00000516261 117 ntBASIC3.15□□□□□ -1.91
PDGFAP04085 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.91
PDGFAP04085 MIR4276-201ENST00000584832 70 ntBASIC3.15□□□□□ -1.91
PDGFAP04085 AC004832.5-201ENST00000608677 401 ntBASIC3.15□□□□□ -1.91
PDGFAP04085 AL162274.2-201ENST00000614406 332 ntBASIC3.15□□□□□ -1.91
PDGFAP04085 MIR6129-201ENST00000616087 109 ntBASIC3.15□□□□□ -1.91
PDGFAP04085 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PDGFAP04085 AL356274.2-201ENST00000624379 3752 ntBASIC3.15□□□□□ -1.91
PDGFAP04085 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PDGFAP04085 RNA5SP383-201ENST00000362934 120 ntBASIC3.14□□□□□ -1.91
PDGFAP04085 RNU6-429P-201ENST00000384582 108 ntBASIC3.14□□□□□ -1.91
PDGFAP04085 AC092427.1-202ENST00000430569 476 ntBASIC3.14□□□□□ -1.91
PDGFAP04085 AC104389.3-201ENST00000445629 235 ntBASIC3.14□□□□□ -1.91
PDGFAP04085 AL109933.2-201ENST00000452651 260 ntBASIC3.14□□□□□ -1.91
PDGFAP04085 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.14□□□□□ -1.91
PDGFAP04085 RNA5SP385-201ENST00000515947 110 ntBASIC3.14□□□□□ -1.91
PDGFAP04085 RNU6-693P-201ENST00000516134 107 ntBASIC3.14□□□□□ -1.91
PDGFAP04085 Y_RNA.666-201ENST00000516187 112 ntBASIC3.14□□□□□ -1.91
PDGFAP04085 SNORA64.4-201ENST00000516632 81 ntBASIC3.14□□□□□ -1.91
PDGFAP04085 AC091544.4-201ENST00000555268 342 ntBASIC3.14□□□□□ -1.91
PDGFAP04085 MIR4506-201ENST00000584693 77 ntBASIC3.14□□□□□ -1.91
PDGFAP04085 AL022345.2-201ENST00000606307 135 ntBASIC3.14□□□□□ -1.91
PDGFAP04085 RNU6-153P-201ENST00000364422 104 ntBASIC3.13□□□□□ -1.91
PDGFAP04085 SNORA40.5-201ENST00000391061 128 ntBASIC3.13□□□□□ -1.91
PDGFAP04085 SNORA11.4-201ENST00000408823 129 ntBASIC3.13□□□□□ -1.91
PDGFAP04085 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.13□□□□□ -1.91
PDGFAP04085 RN7SKP282-201ENST00000516824 299 ntBASIC3.13□□□□□ -1.91
PDGFAP04085 RNU6-579P-201ENST00000516879 102 ntBASIC3.13□□□□□ -1.91
PDGFAP04085 MIR3169-201ENST00000578032 83 ntBASIC3.13□□□□□ -1.91
PDGFAP04085 CTSLP2-204ENST00000629029 392 ntBASIC3.13□□□□□ -1.91
PDGFAP04085 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
PDGFAP04085 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PDGFAP04085 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PDGFAP04085 FAM35CP-201ENST00000554755 2470 ntBASIC3.13□□□□□ -1.91
PDGFAP04085 AL391516.1-201ENST00000554380 2449 ntBASIC3.12□□□□□ -1.91
PDGFAP04085 SNORD68-201ENST00000363214 84 ntBASIC3.12□□□□□ -1.91
PDGFAP04085 SNORA80A-201ENST00000363922 136 ntBASIC3.12□□□□□ -1.91
PDGFAP04085 SNORD58C-201ENST00000365223 64 ntBASIC3.12□□□□□ -1.91
PDGFAP04085 RN7SKP111-201ENST00000410349 271 ntBASIC3.12□□□□□ -1.91
PDGFAP04085 Y_RNA.617-201ENST00000410920 90 ntBASIC3.12□□□□□ -1.91
PDGFAP04085 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.12□□□□□ -1.91
PDGFAP04085 AC006989.1-201ENST00000427212 131 ntBASIC3.12□□□□□ -1.91
PDGFAP04085 AC006028.1-201ENST00000438379 402 ntBASIC3.12□□□□□ -1.91
PDGFAP04085 Z96811.1-201ENST00000445880 108 ntBASIC3.12□□□□□ -1.91
PDGFAP04085 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.12□□□□□ -1.91
PDGFAP04085 TRBV12-1-201ENST00000479785 344 ntBASIC3.12□□□□□ -1.91
PDGFAP04085 AL033523.1-201ENST00000605153 153 ntBASIC3.12□□□□□ -1.91
PDGFAP04085 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
PDGFAP04085 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
PDGFAP04085 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PDGFAP04085 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.12□□□□□ -1.91
PDGFAP04085 AL365361.1-201ENST00000566942 3481 ntBASIC3.12□□□□□ -1.91
PDGFAP04085 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PDGFAP04085 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
PDGFAP04085 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.11□□□□□ -1.91
PDGFAP04085 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PDGFAP04085 RN7SKP123-201ENST00000410732 291 ntBASIC3.11□□□□□ -1.91
PDGFAP04085 COTL1P1-201ENST00000422309 375 ntBASIC3.11□□□□□ -1.91
PDGFAP04085 RN7SL297P-201ENST00000483161 293 ntBASIC3.11□□□□□ -1.91
PDGFAP04085 Y_RNA.709-201ENST00000516952 92 ntBASIC3.11□□□□□ -1.91
PDGFAP04085 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.11□□□□□ -1.91
PDGFAP04085 AL670379.3-201ENST00000605040 251 ntBASIC3.11□□□□□ -1.91
PDGFAP04085 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.11□□□□□ -1.91
PDGFAP04085 MTND5P32-201ENST00000560711 1802 ntBASIC3.11□□□□□ -1.91
PDGFAP04085 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
PDGFAP04085 AC008264.2-201ENST00000610193 3731 ntBASIC3.11□□□□□ -1.91
PDGFAP04085 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PDGFAP04085 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
PDGFAP04085 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.1□□□□□ -1.91
PDGFAP04085 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PDGFAP04085 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PDGFAP04085 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PDGFAP04085 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.1□□□□□ -1.91
PDGFAP04085 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PDGFAP04085 SNORD14E-201ENST00000364009 85 ntBASIC3.1□□□□□ -1.91
PDGFAP04085 RNU6-1164P-201ENST00000364428 107 ntBASIC3.1□□□□□ -1.91
PDGFAP04085 RNU6-442P-201ENST00000383968 104 ntBASIC3.1□□□□□ -1.91
PDGFAP04085 MIR29C-201ENST00000385231 88 ntBASIC3.1□□□□□ -1.91
PDGFAP04085 RNY4P18-201ENST00000391107 89 ntBASIC3.1□□□□□ -1.91
PDGFAP04085 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms