Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.59□□□□□ -2.15
VTNP04004 AC023790.1-201ENST00000482174 347 ntBASIC1.59□□□□□ -2.15
VTNP04004 AL163195.1-201ENST00000496941 348 ntBASIC1.59□□□□□ -2.15
VTNP04004 RNU7-172P-201ENST00000517125 64 ntBASIC1.59□□□□□ -2.15
VTNP04004 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.59□□□□□ -2.15
VTNP04004 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
VTNP04004 AL355297.3-201ENST00000604082 446 ntBASIC1.59□□□□□ -2.15
VTNP04004 AC022441.3-201ENST00000605737 136 ntBASIC1.59□□□□□ -2.15
VTNP04004 AC007742.2-201ENST00000618226 398 ntBASIC1.59□□□□□ -2.15
VTNP04004 U6.73-201ENST00000619194 103 ntBASIC1.59□□□□□ -2.15
VTNP04004 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
VTNP04004 Y_RNA.19-201ENST00000362462 99 ntBASIC1.58□□□□□ -2.16
VTNP04004 RNU6-238P-201ENST00000363313 106 ntBASIC1.58□□□□□ -2.16
VTNP04004 SNORD113-8-201ENST00000363497 74 ntBASIC1.58□□□□□ -2.16
VTNP04004 Y_RNA.153-201ENST00000363615 91 ntBASIC1.58□□□□□ -2.16
VTNP04004 RNU6-271P-201ENST00000363858 105 ntBASIC1.58□□□□□ -2.16
VTNP04004 RNU6-770P-201ENST00000363929 105 ntBASIC1.58□□□□□ -2.16
VTNP04004 SNORD115-30-201ENST00000364117 82 ntBASIC1.58□□□□□ -2.16
VTNP04004 Y_RNA.329-201ENST00000365209 107 ntBASIC1.58□□□□□ -2.16
VTNP04004 RNU6-439P-201ENST00000384188 106 ntBASIC1.58□□□□□ -2.16
VTNP04004 RNU6-296P-201ENST00000384608 107 ntBASIC1.58□□□□□ -2.16
VTNP04004 AL031003.1-201ENST00000404229 172 ntBASIC1.58□□□□□ -2.16
VTNP04004 RNU6-1199P-201ENST00000411249 104 ntBASIC1.58□□□□□ -2.16
VTNP04004 AL390729.2-201ENST00000416137 156 ntBASIC1.58□□□□□ -2.16
VTNP04004 EBAG9P1-201ENST00000418955 543 ntBASIC1.58□□□□□ -2.16
VTNP04004 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.58□□□□□ -2.16
VTNP04004 AC073910.1-201ENST00000445047 438 ntBASIC1.58□□□□□ -2.16
VTNP04004 AC005042.3-201ENST00000453230 174 ntBASIC1.58□□□□□ -2.16
VTNP04004 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.58□□□□□ -2.16
VTNP04004 MRPS35P2-201ENST00000508242 191 ntBASIC1.58□□□□□ -2.16
VTNP04004 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.58□□□□□ -2.16
VTNP04004 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.58□□□□□ -2.16
VTNP04004 AC008737.2-201ENST00000599446 118 ntBASIC1.58□□□□□ -2.16
VTNP04004 AL353621.2-201ENST00000605340 133 ntBASIC1.58□□□□□ -2.16
VTNP04004 Y_RNA.64-201ENST00000362845 102 ntBASIC1.57□□□□□ -2.16
VTNP04004 Y_RNA.214-201ENST00000364201 112 ntBASIC1.57□□□□□ -2.16
VTNP04004 Y_RNA.286-201ENST00000364813 102 ntBASIC1.57□□□□□ -2.16
VTNP04004 RNU6-806P-201ENST00000365147 105 ntBASIC1.57□□□□□ -2.16
VTNP04004 RNU6-1160P-201ENST00000384546 104 ntBASIC1.57□□□□□ -2.16
VTNP04004 MIR520A-201ENST00000384862 85 ntBASIC1.57□□□□□ -2.16
VTNP04004 MIR515-2-201ENST00000384883 83 ntBASIC1.57□□□□□ -2.16
VTNP04004 MIR515-1-201ENST00000384884 83 ntBASIC1.57□□□□□ -2.16
VTNP04004 MIR873-201ENST00000401120 77 ntBASIC1.57□□□□□ -2.16
VTNP04004 AC245047.4-201ENST00000433189 144 ntBASIC1.57□□□□□ -2.16
VTNP04004 AC098869.1-201ENST00000481627 292 ntBASIC1.57□□□□□ -2.16
VTNP04004 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.57□□□□□ -2.16
VTNP04004 HMGB3P17-201ENST00000504195 649 ntBASIC1.57□□□□□ -2.16
VTNP04004 RNU6-436P-201ENST00000516171 114 ntBASIC1.57□□□□□ -2.16
VTNP04004 RNU6-63P-201ENST00000516690 95 ntBASIC1.57□□□□□ -2.16
VTNP04004 SNORA44.1-201ENST00000517031 108 ntBASIC1.57□□□□□ -2.16
VTNP04004 RPL21P9-201ENST00000556149 474 ntBASIC1.57□□□□□ -2.16
VTNP04004 MIR4300-201ENST00000581016 96 ntBASIC1.57□□□□□ -2.16
VTNP04004 AC073413.2-201ENST00000604332 360 ntBASIC1.57□□□□□ -2.16
VTNP04004 AC127459.3-201ENST00000624328 466 ntBASIC1.57□□□□□ -2.16
VTNP04004 AC006435.5-201ENST00000624486 112 ntBASIC1.57□□□□□ -2.16
VTNP04004 Y_RNA.105-201ENST00000363182 111 ntBASIC1.56□□□□□ -2.16
VTNP04004 Y_RNA.327-201ENST00000365201 102 ntBASIC1.56□□□□□ -2.16
VTNP04004 Y_RNA.459-201ENST00000384251 102 ntBASIC1.56□□□□□ -2.16
VTNP04004 SNORD63-201ENST00000384262 68 ntBASIC1.56□□□□□ -2.16
VTNP04004 RNU6-505P-201ENST00000384427 107 ntBASIC1.56□□□□□ -2.16
VTNP04004 RNU6-376P-201ENST00000384731 106 ntBASIC1.56□□□□□ -2.16
VTNP04004 RNA5SP109-201ENST00000391010 116 ntBASIC1.56□□□□□ -2.16
VTNP04004 SNRPGP13-201ENST00000442212 177 ntBASIC1.56□□□□□ -2.16
VTNP04004 AC010655.3-201ENST00000478818 450 ntBASIC1.56□□□□□ -2.16
VTNP04004 SEPT14P8-201ENST00000508026 178 ntBASIC1.56□□□□□ -2.16
VTNP04004 SNORA70.12-201ENST00000516084 153 ntBASIC1.56□□□□□ -2.16
VTNP04004 RNU7-99P-201ENST00000516271 62 ntBASIC1.56□□□□□ -2.16
VTNP04004 Y_RNA.720-201ENST00000517166 92 ntBASIC1.56□□□□□ -2.16
VTNP04004 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.56□□□□□ -2.16
VTNP04004 MIR3145-201ENST00000580727 82 ntBASIC1.56□□□□□ -2.16
VTNP04004 MIR4423-201ENST00000580922 80 ntBASIC1.56□□□□□ -2.16
VTNP04004 MIR4719-201ENST00000585233 84 ntBASIC1.56□□□□□ -2.16
VTNP04004 AL157834.3-201ENST00000615543 103 ntBASIC1.56□□□□□ -2.16
VTNP04004 Y_RNA.26-201ENST00000362539 101 ntBASIC1.55□□□□□ -2.16
VTNP04004 RNU1-22P-201ENST00000363334 158 ntBASIC1.55□□□□□ -2.16
VTNP04004 MIR320A-201ENST00000385302 82 ntBASIC1.55□□□□□ -2.16
VTNP04004 RNA5SP247-201ENST00000411181 105 ntBASIC1.55□□□□□ -2.16
VTNP04004 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.55□□□□□ -2.16
VTNP04004 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.55□□□□□ -2.16
VTNP04004 DYNLT3P2-201ENST00000442517 295 ntBASIC1.55□□□□□ -2.16
VTNP04004 LINC01399-202ENST00000458450 244 ntBASIC1.55□□□□□ -2.16
VTNP04004 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.55□□□□□ -2.16
VTNP04004 AC097462.1-201ENST00000514125 324 ntBASIC1.55□□□□□ -2.16
VTNP04004 SCARNA15.1-201ENST00000516384 125 ntBASIC1.55□□□□□ -2.16
VTNP04004 RNU6-635P-201ENST00000516651 102 ntBASIC1.55□□□□□ -2.16
VTNP04004 AC024995.1-201ENST00000523014 93 ntBASIC1.55□□□□□ -2.16
VTNP04004 MIR3198-2-201ENST00000577868 80 ntBASIC1.55□□□□□ -2.16
VTNP04004 DEFB117-201ENST00000602356 141 ntBASIC1.55□□□□□ -2.16
VTNP04004 AL360085.1-201ENST00000604713 532 ntBASIC1.55□□□□□ -2.16
VTNP04004 SNORD113-5-201ENST00000607261 78 ntBASIC1.55□□□□□ -2.16
VTNP04004 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.55□□□□□ -2.16
VTNP04004 U6.108-201ENST00000637764 58 ntBASIC1.55□□□□□ -2.16
VTNP04004 AC099654.10-201ENST00000640395 161 ntBASIC1.55□□□□□ -2.16
VTNP04004 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.54□□□□□ -2.16
VTNP04004 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
VTNP04004 SNORD81.1-201ENST00000363064 77 ntBASIC1.54□□□□□ -2.16
VTNP04004 Y_RNA.162-201ENST00000363683 102 ntBASIC1.54□□□□□ -2.16
VTNP04004 SNORA63C-201ENST00000364578 129 ntBASIC1.54□□□□□ -2.16
VTNP04004 Y_RNA.267-201ENST00000364679 109 ntBASIC1.54□□□□□ -2.16
VTNP04004 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms