Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RAB28P5-201ENST00000427490 651 ntBASIC0.47□□□□□ -2.33
COL4A1P02462 AC245047.7-201ENST00000440265 293 ntBASIC0.47□□□□□ -2.33
COL4A1P02462 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.47□□□□□ -2.33
COL4A1P02462 RPL17P19-201ENST00000489069 552 ntBASIC0.47□□□□□ -2.33
COL4A1P02462 RNU6-341P-201ENST00000516973 96 ntBASIC0.47□□□□□ -2.33
COL4A1P02462 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.47□□□□□ -2.33
COL4A1P02462 SNORD3E-202ENST00000627253 216 ntBASIC0.47□□□□□ -2.33
COL4A1P02462 U6.115-201ENST00000636045 103 ntBASIC0.47□□□□□ -2.33
COL4A1P02462 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
COL4A1P02462 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
COL4A1P02462 RNU6-1084P-201ENST00000362498 107 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 RNU6-199P-201ENST00000362954 107 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 RNU6-623P-201ENST00000363143 105 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 RNU6-407P-201ENST00000365280 104 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 Y_RNA.404-201ENST00000383978 102 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 Y_RNA.473-201ENST00000384333 102 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 MIR19B1-201ENST00000384829 87 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 RNA5SP118-201ENST00000410385 109 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 STAG3L5P-204ENST00000443759 179 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 LINC01399-202ENST00000458450 244 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 RNU7-34P-201ENST00000459394 64 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 AP000870.1-201ENST00000472927 406 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 TRBVB-201ENST00000477100 408 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.46□□□□□ -2.34
COL4A1P02462 AC046134.1-201ENST00000514454 666 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 SNORA31.4-201ENST00000516049 129 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 Y_RNA.683-201ENST00000516508 93 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 SCARNA16.2-201ENST00000516520 172 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 RNU7-28P-201ENST00000516759 62 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 RNU7-30P-201ENST00000516835 62 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 RNU7-172P-201ENST00000517125 64 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 MIR2355-201ENST00000517199 87 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 AC105029.1-201ENST00000520250 669 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 AC136628.3-201ENST00000521868 290 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 AC090617.3-201ENST00000573670 475 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 MIR5695-201ENST00000579717 85 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 AC006380.1-201ENST00000603598 186 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 U4.5-201ENST00000617137 123 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 AL513423.1-201ENST00000621695 132 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.46□□□□□ -2.34
COL4A1P02462 SNORD114-7-201ENST00000362520 77 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 Y_RNA.106-201ENST00000363189 100 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 Y_RNA.243-201ENST00000364481 109 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 RNU6-99P-201ENST00000364721 107 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 RNU4-12P-201ENST00000365233 139 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 SNORA20B-201ENST00000384220 132 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 MIR562-201ENST00000384894 95 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 RNA5SP299-201ENST00000391203 116 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 RNA5SP482-201ENST00000391269 118 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 RNU6-1050P-201ENST00000410388 107 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 MTND3P8-201ENST00000412909 339 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 AC114482.1-201ENST00000418010 247 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 AC093850.1-201ENST00000454121 251 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 U8.22-201ENST00000459141 133 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 AC091021.1-201ENST00000468051 388 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 RNU4-77P-201ENST00000516692 156 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 RNU6-1314P-201ENST00000517139 104 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.46□□□□□ -2.34
COL4A1P02462 AC023442.1-201ENST00000531247 422 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 EIF1P4-201ENST00000572664 335 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 AC018638.8-201ENST00000588755 281 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 SNORA28-201ENST00000606769 126 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 BX284668.6-201ENST00000606899 438 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 AC090517.2-201ENST00000614966 680 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 MIR6718-201ENST00000616153 80 ntBASIC0.46□□□□□ -2.34
COL4A1P02462 AL391516.1-201ENST00000554380 2449 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 MIRLET7C-201ENST00000362160 84 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 RNU6-1266P-201ENST00000362794 105 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 Y_RNA.267-201ENST00000364679 109 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 RNU6-1310P-201ENST00000384153 107 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 RNU6-1065P-201ENST00000384513 106 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 RNU6-831P-201ENST00000384548 107 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 Y_RNA.573-201ENST00000384763 105 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 SNORA75.4-201ENST00000391278 119 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 MIR190B-201ENST00000401119 79 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 AL022718.1-201ENST00000412004 84 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 RPL23AP50-201ENST00000434149 455 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 RNU7-87P-201ENST00000459343 62 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.45□□□□□ -2.34
COL4A1P02462 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.45□□□□□ -2.34
COL4A1P02462 RNU7-128P-201ENST00000517247 62 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 AC134698.4-201ENST00000523451 826 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 AC018448.1-201ENST00000552843 316 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.45□□□□□ -2.34
COL4A1P02462 AL022345.2-201ENST00000606307 135 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 AC004467.1-201ENST00000615678 330 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 AC100810.6-201ENST00000638068 285 ntBASIC0.45□□□□□ -2.34
COL4A1P02462 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
COL4A1P02462 MIR410-201ENST00000362222 80 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 RNU6-845P-201ENST00000362578 103 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 SNORA27.1-201ENST00000362604 124 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 Y_RNA.363-201ENST00000365529 113 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 Y_RNA.364-201ENST00000365532 101 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 RNU6-424P-201ENST00000384367 105 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 RNU6-306P-201ENST00000384617 107 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 MIR608-201ENST00000384820 100 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 MIR660-201ENST00000385235 97 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 SNORD115-47-201ENST00000391226 86 ntBASIC0.44□□□□□ -2.34
COL4A1P02462 Z95118.1-201ENST00000421372 247 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms