Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 RPS29P29-201ENST00000456396 171 ntBASIC1.59□□□□□ -2.15
MBD4O95243 RNU6-1053P-201ENST00000515930 101 ntBASIC1.59□□□□□ -2.15
MBD4O95243 RNU6-155P-201ENST00000516347 100 ntBASIC1.59□□□□□ -2.15
MBD4O95243 RNU6-1096P-201ENST00000517089 102 ntBASIC1.59□□□□□ -2.15
MBD4O95243 RNU6-424P-201ENST00000384367 105 ntBASIC1.58□□□□□ -2.16
MBD4O95243 RNU6-321P-201ENST00000410912 106 ntBASIC1.58□□□□□ -2.16
MBD4O95243 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.58□□□□□ -2.16
MBD4O95243 AF228730.4-201ENST00000421457 183 ntBASIC1.58□□□□□ -2.16
MBD4O95243 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.58□□□□□ -2.16
MBD4O95243 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.58□□□□□ -2.16
MBD4O95243 OR9P1P-201ENST00000496431 281 ntBASIC1.58□□□□□ -2.16
MBD4O95243 AC005840.1-201ENST00000498412 377 ntBASIC1.58□□□□□ -2.16
MBD4O95243 Y_RNA.661-201ENST00000516003 99 ntBASIC1.58□□□□□ -2.16
MBD4O95243 RNA5SP168-201ENST00000516642 112 ntBASIC1.58□□□□□ -2.16
MBD4O95243 AC092447.9-201ENST00000603395 144 ntBASIC1.58□□□□□ -2.16
MBD4O95243 AL353770.2-201ENST00000620024 78 ntBASIC1.58□□□□□ -2.16
MBD4O95243 RNU4-73P-201ENST00000363164 141 ntBASIC1.57□□□□□ -2.16
MBD4O95243 Y_RNA.315-201ENST00000365117 102 ntBASIC1.57□□□□□ -2.16
MBD4O95243 Y_RNA.446-201ENST00000384178 104 ntBASIC1.57□□□□□ -2.16
MBD4O95243 RNU6-708P-201ENST00000384217 107 ntBASIC1.57□□□□□ -2.16
MBD4O95243 AL162725.1-201ENST00000435405 301 ntBASIC1.57□□□□□ -2.16
MBD4O95243 AC233266.1-201ENST00000454518 96 ntBASIC1.57□□□□□ -2.16
MBD4O95243 AL049830.1-201ENST00000468034 425 ntBASIC1.57□□□□□ -2.16
MBD4O95243 RNU6-1337P-201ENST00000516525 95 ntBASIC1.57□□□□□ -2.16
MBD4O95243 SNORA40.14-201ENST00000516543 86 ntBASIC1.57□□□□□ -2.16
MBD4O95243 RNU6-63P-201ENST00000516690 95 ntBASIC1.57□□□□□ -2.16
MBD4O95243 MIR3664-201ENST00000579074 99 ntBASIC1.57□□□□□ -2.16
MBD4O95243 MIR3660-201ENST00000584845 100 ntBASIC1.57□□□□□ -2.16
MBD4O95243 AC242852.1-201ENST00000612151 96 ntBASIC1.57□□□□□ -2.16
MBD4O95243 AC010205.1-201ENST00000616668 449 ntBASIC1.57□□□□□ -2.16
MBD4O95243 AC244015.1-201ENST00000622301 99 ntBASIC1.57□□□□□ -2.16
MBD4O95243 Y_RNA.58-201ENST00000362807 102 ntBASIC1.56□□□□□ -2.16
MBD4O95243 Y_RNA.154-201ENST00000363624 102 ntBASIC1.56□□□□□ -2.16
MBD4O95243 RNU6-324P-201ENST00000363957 106 ntBASIC1.56□□□□□ -2.16
MBD4O95243 RNY3P1-201ENST00000365085 102 ntBASIC1.56□□□□□ -2.16
MBD4O95243 RNY3-201ENST00000365484 102 ntBASIC1.56□□□□□ -2.16
MBD4O95243 Y_RNA.496-201ENST00000384444 101 ntBASIC1.56□□□□□ -2.16
MBD4O95243 Y_RNA.526-201ENST00000384572 110 ntBASIC1.56□□□□□ -2.16
MBD4O95243 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
MBD4O95243 SNORA40.6-201ENST00000391153 128 ntBASIC1.56□□□□□ -2.16
MBD4O95243 RNU2-61P-201ENST00000411069 191 ntBASIC1.56□□□□□ -2.16
MBD4O95243 AL354751.2-201ENST00000415471 210 ntBASIC1.56□□□□□ -2.16
MBD4O95243 AL390729.2-201ENST00000416137 156 ntBASIC1.56□□□□□ -2.16
MBD4O95243 CALM2P4-201ENST00000430810 426 ntBASIC1.56□□□□□ -2.16
MBD4O95243 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.56□□□□□ -2.16
MBD4O95243 AC092991.1-201ENST00000477176 376 ntBASIC1.56□□□□□ -2.16
MBD4O95243 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.56□□□□□ -2.16
MBD4O95243 RN7SKP88-201ENST00000516847 250 ntBASIC1.56□□□□□ -2.16
MBD4O95243 RN7SKP295-201ENST00000517264 153 ntBASIC1.56□□□□□ -2.16
MBD4O95243 CYP3A52P-201ENST00000563326 91 ntBASIC1.56□□□□□ -2.16
MBD4O95243 MIR4795-201ENST00000584182 89 ntBASIC1.56□□□□□ -2.16
MBD4O95243 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.56□□□□□ -2.16
MBD4O95243 RPS29P30-201ENST00000600975 111 ntBASIC1.56□□□□□ -2.16
MBD4O95243 AL513534.2-201ENST00000603836 250 ntBASIC1.56□□□□□ -2.16
MBD4O95243 LARP7P1-201ENST00000605576 316 ntBASIC1.56□□□□□ -2.16
MBD4O95243 AC022441.3-201ENST00000605737 136 ntBASIC1.56□□□□□ -2.16
MBD4O95243 7SK.8-201ENST00000612110 250 ntBASIC1.56□□□□□ -2.16
MBD4O95243 7SK.11-201ENST00000615477 250 ntBASIC1.56□□□□□ -2.16
MBD4O95243 7SK.13-201ENST00000622040 250 ntBASIC1.56□□□□□ -2.16
MBD4O95243 AL606534.2-204ENST00000635008 178 ntBASIC1.56□□□□□ -2.16
MBD4O95243 RNU6-199P-201ENST00000362954 107 ntBASIC1.55□□□□□ -2.16
MBD4O95243 Y_RNA.327-201ENST00000365201 102 ntBASIC1.55□□□□□ -2.16
MBD4O95243 RNU6-136P-201ENST00000384663 107 ntBASIC1.55□□□□□ -2.16
MBD4O95243 U8.16-201ENST00000391279 133 ntBASIC1.55□□□□□ -2.16
MBD4O95243 RNU6-1199P-201ENST00000411249 104 ntBASIC1.55□□□□□ -2.16
MBD4O95243 AL160004.2-201ENST00000432935 350 ntBASIC1.55□□□□□ -2.16
MBD4O95243 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.55□□□□□ -2.16
MBD4O95243 AC068338.1-201ENST00000565567 176 ntBASIC1.55□□□□□ -2.16
MBD4O95243 MIR4778-201ENST00000577635 80 ntBASIC1.55□□□□□ -2.16
MBD4O95243 Y_RNA.772-201ENST00000606692 102 ntBASIC1.55□□□□□ -2.16
MBD4O95243 MIR8065-201ENST00000620577 100 ntBASIC1.55□□□□□ -2.16
MBD4O95243 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
MBD4O95243 Y_RNA.5-201ENST00000362334 102 ntBASIC1.54□□□□□ -2.16
MBD4O95243 RNU4-79P-201ENST00000362764 141 ntBASIC1.54□□□□□ -2.16
MBD4O95243 MIR758-201ENST00000390227 88 ntBASIC1.54□□□□□ -2.16
MBD4O95243 RNA5SP511-201ENST00000410487 115 ntBASIC1.54□□□□□ -2.16
MBD4O95243 AC022028.1-201ENST00000412054 408 ntBASIC1.54□□□□□ -2.16
MBD4O95243 RNU4-77P-201ENST00000516692 156 ntBASIC1.54□□□□□ -2.16
MBD4O95243 MIR5188-201ENST00000583467 113 ntBASIC1.54□□□□□ -2.16
MBD4O95243 AL121655.1-201ENST00000605811 308 ntBASIC1.54□□□□□ -2.16
MBD4O95243 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.54□□□□□ -2.16
MBD4O95243 AC104985.2-201ENST00000620598 500 ntBASIC1.54□□□□□ -2.16
MBD4O95243 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
MBD4O95243 Y_RNA.570-201ENST00000384750 101 ntBASIC1.53□□□□□ -2.16
MBD4O95243 MTATP6P23-201ENST00000440153 476 ntBASIC1.53□□□□□ -2.16
MBD4O95243 AC092473.1-201ENST00000441098 221 ntBASIC1.53□□□□□ -2.16
MBD4O95243 AC005042.3-201ENST00000453230 174 ntBASIC1.53□□□□□ -2.16
MBD4O95243 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.53□□□□□ -2.16
MBD4O95243 TRMT112P2-201ENST00000512910 132 ntBASIC1.53□□□□□ -2.16
MBD4O95243 RNU6-436P-201ENST00000516171 114 ntBASIC1.53□□□□□ -2.16
MBD4O95243 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.53□□□□□ -2.16
MBD4O95243 AC022616.4-201ENST00000522985 181 ntBASIC1.53□□□□□ -2.16
MBD4O95243 AC005592.1-201ENST00000566527 1640 ntBASIC1.53□□□□□ -2.16
MBD4O95243 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.53□□□□□ -2.16
MBD4O95243 AC106754.2-201ENST00000623006 233 ntBASIC1.53□□□□□ -2.16
MBD4O95243 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.53□□□□□ -2.16
MBD4O95243 Y_RNA.4-201ENST00000362333 112 ntBASIC1.52□□□□□ -2.17
MBD4O95243 Y_RNA.197-201ENST00000364004 102 ntBASIC1.52□□□□□ -2.17
MBD4O95243 RNU6-1175P-201ENST00000365200 107 ntBASIC1.52□□□□□ -2.17
MBD4O95243 Y_RNA.462-201ENST00000384268 102 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 222.4 ms