Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 Y_RNA.265-201ENST00000364677 108 ntBASIC1.67□□□□□ -2.14
RTN3O95197 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.67□□□□□ -2.14
RTN3O95197 AL390729.2-201ENST00000416137 156 ntBASIC1.67□□□□□ -2.14
RTN3O95197 AC027119.1-201ENST00000440877 241 ntBASIC1.67□□□□□ -2.14
RTN3O95197 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.67□□□□□ -2.14
RTN3O95197 RNU1-98P-201ENST00000458992 160 ntBASIC1.67□□□□□ -2.14
RTN3O95197 RNU7-28P-201ENST00000516759 62 ntBASIC1.67□□□□□ -2.14
RTN3O95197 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RTN3O95197 AP002004.2-201ENST00000531656 154 ntBASIC1.67□□□□□ -2.14
RTN3O95197 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.67□□□□□ -2.14
RTN3O95197 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.67□□□□□ -2.14
RTN3O95197 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.67□□□□□ -2.14
RTN3O95197 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.67□□□□□ -2.14
RTN3O95197 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
RTN3O95197 MIR369-201ENST00000362155 70 ntBASIC1.66□□□□□ -2.14
RTN3O95197 Y_RNA.80-201ENST00000362996 102 ntBASIC1.66□□□□□ -2.14
RTN3O95197 Y_RNA.116-201ENST00000363292 103 ntBASIC1.66□□□□□ -2.14
RTN3O95197 RNA5SP259-201ENST00000365541 109 ntBASIC1.66□□□□□ -2.14
RTN3O95197 Y_RNA.458-201ENST00000384240 102 ntBASIC1.66□□□□□ -2.14
RTN3O95197 Y_RNA.460-201ENST00000384255 102 ntBASIC1.66□□□□□ -2.14
RTN3O95197 Y_RNA.462-201ENST00000384268 102 ntBASIC1.66□□□□□ -2.14
RTN3O95197 Y_RNA.485-201ENST00000384395 102 ntBASIC1.66□□□□□ -2.14
RTN3O95197 Y_RNA.570-201ENST00000384750 101 ntBASIC1.66□□□□□ -2.14
RTN3O95197 MIR518E-201ENST00000385252 88 ntBASIC1.66□□□□□ -2.14
RTN3O95197 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.66□□□□□ -2.14
RTN3O95197 SNORA12.1-201ENST00000390873 148 ntBASIC1.66□□□□□ -2.14
RTN3O95197 RNU4-62P-201ENST00000410125 130 ntBASIC1.66□□□□□ -2.14
RTN3O95197 RNU5A-5P-201ENST00000411054 116 ntBASIC1.66□□□□□ -2.14
RTN3O95197 RNU6-1199P-201ENST00000411249 104 ntBASIC1.66□□□□□ -2.14
RTN3O95197 RNU6-1337P-201ENST00000516525 95 ntBASIC1.66□□□□□ -2.14
RTN3O95197 Y_RNA.713-201ENST00000517013 96 ntBASIC1.66□□□□□ -2.14
RTN3O95197 RNU6-902P-201ENST00000517212 91 ntBASIC1.66□□□□□ -2.14
RTN3O95197 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.66□□□□□ -2.14
RTN3O95197 MIR4423-201ENST00000580922 80 ntBASIC1.66□□□□□ -2.14
RTN3O95197 BX248123.2-201ENST00000606318 124 ntBASIC1.66□□□□□ -2.14
RTN3O95197 AC073349.3-201ENST00000617616 186 ntBASIC1.66□□□□□ -2.14
RTN3O95197 AL160413.1-201ENST00000622780 310 ntBASIC1.66□□□□□ -2.14
RTN3O95197 AC090574.1-201ENST00000623186 233 ntBASIC1.66□□□□□ -2.14
RTN3O95197 RNU4-50P-201ENST00000364361 141 ntBASIC1.65□□□□□ -2.15
RTN3O95197 RNU6-1175P-201ENST00000365200 107 ntBASIC1.65□□□□□ -2.15
RTN3O95197 RNU6-1065P-201ENST00000384513 106 ntBASIC1.65□□□□□ -2.15
RTN3O95197 MIR517C-201ENST00000385103 95 ntBASIC1.65□□□□□ -2.15
RTN3O95197 MIR1302-11-201ENST00000408051 138 ntBASIC1.65□□□□□ -2.15
RTN3O95197 MIR1302-9-201ENST00000408365 138 ntBASIC1.65□□□□□ -2.15
RTN3O95197 MIR1302-10-201ENST00000408734 138 ntBASIC1.65□□□□□ -2.15
RTN3O95197 RNU2-61P-201ENST00000411069 191 ntBASIC1.65□□□□□ -2.15
RTN3O95197 AP1B1P2-201ENST00000416196 106 ntBASIC1.65□□□□□ -2.15
RTN3O95197 AC005042.3-201ENST00000453230 174 ntBASIC1.65□□□□□ -2.15
RTN3O95197 RNU6-436P-201ENST00000516171 114 ntBASIC1.65□□□□□ -2.15
RTN3O95197 RNU6-1291P-201ENST00000516591 104 ntBASIC1.65□□□□□ -2.15
RTN3O95197 RNU6-63P-201ENST00000516690 95 ntBASIC1.65□□□□□ -2.15
RTN3O95197 AC019176.1-201ENST00000518519 225 ntBASIC1.65□□□□□ -2.15
RTN3O95197 AL358944.1-201ENST00000528537 144 ntBASIC1.65□□□□□ -2.15
RTN3O95197 MIR3937-201ENST00000580135 106 ntBASIC1.65□□□□□ -2.15
RTN3O95197 MIR1302-2-201ENST00000607096 138 ntBASIC1.65□□□□□ -2.15
RTN3O95197 AC007485.1-201ENST00000616755 206 ntBASIC1.65□□□□□ -2.15
RTN3O95197 SNORA1B-201ENST00000362535 133 ntBASIC1.64□□□□□ -2.15
RTN3O95197 Y_RNA.61-201ENST00000362835 102 ntBASIC1.64□□□□□ -2.15
RTN3O95197 SNORD14.1-201ENST00000365609 90 ntBASIC1.64□□□□□ -2.15
RTN3O95197 Y_RNA.445-201ENST00000384168 102 ntBASIC1.64□□□□□ -2.15
RTN3O95197 Y_RNA.604-201ENST00000410574 102 ntBASIC1.64□□□□□ -2.15
RTN3O95197 MCFD2P1-201ENST00000417812 300 ntBASIC1.64□□□□□ -2.15
RTN3O95197 MTND1P14-201ENST00000427400 950 ntBASIC1.64□□□□□ -2.15
RTN3O95197 U8.20-201ENST00000459445 131 ntBASIC1.64□□□□□ -2.15
RTN3O95197 RNU6-1096P-201ENST00000517089 102 ntBASIC1.64□□□□□ -2.15
RTN3O95197 AC040926.1-201ENST00000530195 238 ntBASIC1.64□□□□□ -2.15
RTN3O95197 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.64□□□□□ -2.15
RTN3O95197 MIR4303-201ENST00000581299 66 ntBASIC1.64□□□□□ -2.15
RTN3O95197 AL121890.5-201ENST00000620848 304 ntBASIC1.64□□□□□ -2.15
RTN3O95197 AC005592.1-201ENST00000566527 1640 ntBASIC1.64□□□□□ -2.15
RTN3O95197 RNU6-60P-201ENST00000364792 103 ntBASIC1.63□□□□□ -2.15
RTN3O95197 Y_RNA.439-201ENST00000384119 94 ntBASIC1.63□□□□□ -2.15
RTN3O95197 RNU6-136P-201ENST00000384663 107 ntBASIC1.63□□□□□ -2.15
RTN3O95197 SNORA67.6-201ENST00000391093 99 ntBASIC1.63□□□□□ -2.15
RTN3O95197 RNA5SP482-201ENST00000391269 118 ntBASIC1.63□□□□□ -2.15
RTN3O95197 AL162725.1-201ENST00000435405 301 ntBASIC1.63□□□□□ -2.15
RTN3O95197 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.63□□□□□ -2.15
RTN3O95197 MTND4P19-201ENST00000446659 478 ntBASIC1.63□□□□□ -2.15
RTN3O95197 SNORD3E-202ENST00000627253 216 ntBASIC1.63□□□□□ -2.15
RTN3O95197 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RTN3O95197 Y_RNA.424-201ENST00000384063 103 ntBASIC1.62□□□□□ -2.15
RTN3O95197 MIR660-201ENST00000385235 97 ntBASIC1.62□□□□□ -2.15
RTN3O95197 RNA5SP511-201ENST00000410487 115 ntBASIC1.62□□□□□ -2.15
RTN3O95197 AL354751.2-201ENST00000415471 210 ntBASIC1.62□□□□□ -2.15
RTN3O95197 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.62□□□□□ -2.15
RTN3O95197 SNX2P2-201ENST00000424553 323 ntBASIC1.62□□□□□ -2.15
RTN3O95197 AC233266.1-201ENST00000454518 96 ntBASIC1.62□□□□□ -2.15
RTN3O95197 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.62□□□□□ -2.15
RTN3O95197 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.62□□□□□ -2.15
RTN3O95197 SNORA25.10-201ENST00000515926 124 ntBASIC1.62□□□□□ -2.15
RTN3O95197 RNU6-966P-201ENST00000516479 104 ntBASIC1.62□□□□□ -2.15
RTN3O95197 SUMO2P16-201ENST00000519475 264 ntBASIC1.62□□□□□ -2.15
RTN3O95197 AC015720.1-201ENST00000565251 277 ntBASIC1.62□□□□□ -2.15
RTN3O95197 PRR13P7-201ENST00000605538 430 ntBASIC1.62□□□□□ -2.15
RTN3O95197 AL365434.2-201ENST00000607979 234 ntBASIC1.62□□□□□ -2.15
RTN3O95197 AC242852.1-201ENST00000612151 96 ntBASIC1.62□□□□□ -2.15
RTN3O95197 AC244015.1-201ENST00000622301 99 ntBASIC1.62□□□□□ -2.15
RTN3O95197 AC091812.1-201ENST00000432235 1948 ntBASIC1.62□□□□□ -2.15
RTN3O95197 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.61□□□□□ -2.15
RTN3O95197 RNU4-13P-201ENST00000364019 141 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 305.6 ms