Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 RNU6-667P-201ENST00000517186 102 ntBASIC2.18□□□□□ -2.06
CNOT3O75175 AC025647.1-201ENST00000517879 253 ntBASIC2.18□□□□□ -2.06
CNOT3O75175 AC100767.1-201ENST00000528178 123 ntBASIC2.18□□□□□ -2.06
CNOT3O75175 MIR5007-201ENST00000583098 95 ntBASIC2.18□□□□□ -2.06
CNOT3O75175 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.18□□□□□ -2.06
CNOT3O75175 U6.106-201ENST00000636360 105 ntBASIC2.18□□□□□ -2.06
CNOT3O75175 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CNOT3O75175 Y_RNA.238-201ENST00000364441 102 ntBASIC2.17□□□□□ -2.06
CNOT3O75175 RNU6-1240P-201ENST00000365155 104 ntBASIC2.17□□□□□ -2.06
CNOT3O75175 SNORD116-13-201ENST00000384408 92 ntBASIC2.17□□□□□ -2.06
CNOT3O75175 MIR1253-201ENST00000408273 105 ntBASIC2.17□□□□□ -2.06
CNOT3O75175 RNA5SP425-201ENST00000410336 112 ntBASIC2.17□□□□□ -2.06
CNOT3O75175 RPS15AP28-201ENST00000435088 386 ntBASIC2.17□□□□□ -2.06
CNOT3O75175 AC091021.1-201ENST00000468051 388 ntBASIC2.17□□□□□ -2.06
CNOT3O75175 RPS26P55-201ENST00000471178 356 ntBASIC2.17□□□□□ -2.06
CNOT3O75175 AC117454.1-201ENST00000491120 168 ntBASIC2.17□□□□□ -2.06
CNOT3O75175 YWHAEP4-201ENST00000505390 198 ntBASIC2.17□□□□□ -2.06
CNOT3O75175 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.17□□□□□ -2.06
CNOT3O75175 AC093259.1-201ENST00000509755 300 ntBASIC2.17□□□□□ -2.06
CNOT3O75175 RNU2-34P-201ENST00000516534 121 ntBASIC2.17□□□□□ -2.06
CNOT3O75175 RNU6-63P-201ENST00000516690 95 ntBASIC2.17□□□□□ -2.06
CNOT3O75175 RNU6-255P-201ENST00000516957 105 ntBASIC2.17□□□□□ -2.06
CNOT3O75175 MRPS18CP4-201ENST00000535821 231 ntBASIC2.17□□□□□ -2.06
CNOT3O75175 AC002984.1-201ENST00000591692 448 ntBASIC2.17□□□□□ -2.06
CNOT3O75175 Y_RNA.802-201ENST00000614892 130 ntBASIC2.17□□□□□ -2.06
CNOT3O75175 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CNOT3O75175 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
CNOT3O75175 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CNOT3O75175 Y_RNA.24-201ENST00000362508 103 ntBASIC2.16□□□□□ -2.06
CNOT3O75175 Y_RNA.240-201ENST00000364469 95 ntBASIC2.16□□□□□ -2.06
CNOT3O75175 Y_RNA.435-201ENST00000384095 112 ntBASIC2.16□□□□□ -2.06
CNOT3O75175 AC123900.1-201ENST00000420390 96 ntBASIC2.16□□□□□ -2.06
CNOT3O75175 AC003685.2-201ENST00000422795 395 ntBASIC2.16□□□□□ -2.06
CNOT3O75175 AL356320.1-201ENST00000429616 163 ntBASIC2.16□□□□□ -2.06
CNOT3O75175 MIR1273D-201ENST00000577266 86 ntBASIC2.16□□□□□ -2.06
CNOT3O75175 AC004832.4-201ENST00000608952 331 ntBASIC2.16□□□□□ -2.06
CNOT3O75175 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.16□□□□□ -2.06
CNOT3O75175 MIR548AY-201ENST00000617669 107 ntBASIC2.16□□□□□ -2.06
CNOT3O75175 AC021753.1-201ENST00000635724 168 ntBASIC2.16□□□□□ -2.06
CNOT3O75175 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CNOT3O75175 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CNOT3O75175 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
CNOT3O75175 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CNOT3O75175 MIR367-201ENST00000362299 68 ntBASIC2.15□□□□□ -2.07
CNOT3O75175 RNU4-13P-201ENST00000364019 141 ntBASIC2.15□□□□□ -2.07
CNOT3O75175 U8.7-201ENST00000364940 136 ntBASIC2.15□□□□□ -2.07
CNOT3O75175 RNU6-969P-201ENST00000383900 105 ntBASIC2.15□□□□□ -2.07
CNOT3O75175 RNU6-136P-201ENST00000384663 107 ntBASIC2.15□□□□□ -2.07
CNOT3O75175 Y_RNA.572-201ENST00000384757 98 ntBASIC2.15□□□□□ -2.07
CNOT3O75175 AL355497.1-201ENST00000406262 551 ntBASIC2.15□□□□□ -2.07
CNOT3O75175 RN7SKP192-201ENST00000411291 327 ntBASIC2.15□□□□□ -2.07
CNOT3O75175 AC016909.1-201ENST00000415916 166 ntBASIC2.15□□□□□ -2.07
CNOT3O75175 Y_RNA.797-201ENST00000515977 94 ntBASIC2.15□□□□□ -2.07
CNOT3O75175 SUMO2P18-201ENST00000518873 252 ntBASIC2.15□□□□□ -2.07
CNOT3O75175 MIR4648-201ENST00000580107 72 ntBASIC2.15□□□□□ -2.07
CNOT3O75175 MIR3133-201ENST00000583157 78 ntBASIC2.15□□□□□ -2.07
CNOT3O75175 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.15□□□□□ -2.07
CNOT3O75175 AC068700.1-201ENST00000565862 3754 ntBASIC2.14□□□□□ -2.07
CNOT3O75175 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CNOT3O75175 SNORD114-7-201ENST00000362520 77 ntBASIC2.14□□□□□ -2.07
CNOT3O75175 RNA5SP138-201ENST00000365098 114 ntBASIC2.14□□□□□ -2.07
CNOT3O75175 RNU6-804P-201ENST00000384286 107 ntBASIC2.14□□□□□ -2.07
CNOT3O75175 AL135786.1-201ENST00000415892 214 ntBASIC2.14□□□□□ -2.07
CNOT3O75175 HMGN2P34-201ENST00000437647 269 ntBASIC2.14□□□□□ -2.07
CNOT3O75175 AL357134.1-201ENST00000445848 426 ntBASIC2.14□□□□□ -2.07
CNOT3O75175 HSPE1P13-201ENST00000451143 297 ntBASIC2.14□□□□□ -2.07
CNOT3O75175 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.14□□□□□ -2.07
CNOT3O75175 RNU6-1007P-201ENST00000516586 107 ntBASIC2.14□□□□□ -2.07
CNOT3O75175 MIR4438-201ENST00000585271 93 ntBASIC2.14□□□□□ -2.07
CNOT3O75175 MIR6715A-201ENST00000615929 79 ntBASIC2.14□□□□□ -2.07
CNOT3O75175 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CNOT3O75175 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CNOT3O75175 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CNOT3O75175 RNU1-91P-201ENST00000364746 163 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 Y_RNA.332-201ENST00000365271 113 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 SNORA25B-201ENST00000365507 128 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 Y_RNA.412-201ENST00000384001 104 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 MIR626-201ENST00000385032 94 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 MIR221-201ENST00000385135 110 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CNOT3O75175 RNU6-381P-201ENST00000391259 108 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 SNORA36B-201ENST00000410438 131 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 RNU2-48P-201ENST00000410694 191 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 AC010154.1-201ENST00000425857 269 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 MTCO1P44-201ENST00000441935 243 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 AC009238.1-201ENST00000442165 424 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 AC009237.6-201ENST00000446969 424 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.13□□□□□ -2.07
CNOT3O75175 AC245047.8-201ENST00000456455 284 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 RPS27P21-201ENST00000486977 252 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 RPL23AP54-201ENST00000495129 419 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.13□□□□□ -2.07
CNOT3O75175 RN7SKP164-201ENST00000516138 266 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 RNU7-115P-201ENST00000516433 55 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.13□□□□□ -2.07
CNOT3O75175 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.13□□□□□ -2.07
CNOT3O75175 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.13□□□□□ -2.07
CNOT3O75175 MIR4724-201ENST00000579485 89 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.13□□□□□ -2.07
CNOT3O75175 POLR3GP1-201ENST00000594073 261 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms