Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 RNU6-136P-201ENST00000384663 107 ntBASIC2.5□□□□□ -2.01
KDM1AO60341 MIR27B-201ENST00000385129 97 ntBASIC2.5□□□□□ -2.01
KDM1AO60341 RNA5SP465-201ENST00000391195 109 ntBASIC2.5□□□□□ -2.01
KDM1AO60341 RNU6-918P-201ENST00000391219 106 ntBASIC2.5□□□□□ -2.01
KDM1AO60341 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.5□□□□□ -2.01
KDM1AO60341 SNORA11.4-201ENST00000408823 129 ntBASIC2.5□□□□□ -2.01
KDM1AO60341 RNU2-52P-201ENST00000410680 190 ntBASIC2.5□□□□□ -2.01
KDM1AO60341 RNA5SP270-201ENST00000411361 118 ntBASIC2.5□□□□□ -2.01
KDM1AO60341 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.5□□□□□ -2.01
KDM1AO60341 AC099677.2-201ENST00000436385 175 ntBASIC2.5□□□□□ -2.01
KDM1AO60341 RPS4XP11-201ENST00000446897 772 ntBASIC2.5□□□□□ -2.01
KDM1AO60341 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.5□□□□□ -2.01
KDM1AO60341 RPL23AP54-201ENST00000495129 419 ntBASIC2.5□□□□□ -2.01
KDM1AO60341 AC072026.1-201ENST00000605023 201 ntBASIC2.5□□□□□ -2.01
KDM1AO60341 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
KDM1AO60341 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KDM1AO60341 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
KDM1AO60341 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
KDM1AO60341 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
KDM1AO60341 RNU4-10P-201ENST00000364383 140 ntBASIC2.49□□□□□ -2.01
KDM1AO60341 Y_RNA.435-201ENST00000384095 112 ntBASIC2.49□□□□□ -2.01
KDM1AO60341 SNORA8-201ENST00000384574 139 ntBASIC2.49□□□□□ -2.01
KDM1AO60341 MIR597-201ENST00000384968 97 ntBASIC2.49□□□□□ -2.01
KDM1AO60341 MIR520G-201ENST00000385064 90 ntBASIC2.49□□□□□ -2.01
KDM1AO60341 MIR1283-2-201ENST00000408621 87 ntBASIC2.49□□□□□ -2.01
KDM1AO60341 COX6CP10-201ENST00000416832 224 ntBASIC2.49□□□□□ -2.01
KDM1AO60341 RPS26P45-201ENST00000471748 340 ntBASIC2.49□□□□□ -2.01
KDM1AO60341 AC006023.1-201ENST00000603944 259 ntBASIC2.49□□□□□ -2.01
KDM1AO60341 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.49□□□□□ -2.01
KDM1AO60341 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KDM1AO60341 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
KDM1AO60341 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KDM1AO60341 Y_RNA.555-201ENST00000384673 110 ntBASIC2.48□□□□□ -2.01
KDM1AO60341 MIR548I3-201ENST00000408378 149 ntBASIC2.48□□□□□ -2.01
KDM1AO60341 MIR548I1-201ENST00000408810 149 ntBASIC2.48□□□□□ -2.01
KDM1AO60341 AC009310.1-201ENST00000414414 451 ntBASIC2.48□□□□□ -2.01
KDM1AO60341 RNU6-437P-201ENST00000459408 95 ntBASIC2.48□□□□□ -2.01
KDM1AO60341 AC107393.1-201ENST00000512403 346 ntBASIC2.48□□□□□ -2.01
KDM1AO60341 RNA5SP24-201ENST00000516478 95 ntBASIC2.48□□□□□ -2.01
KDM1AO60341 RNU6-1096P-201ENST00000517089 102 ntBASIC2.48□□□□□ -2.01
KDM1AO60341 MIR4724-201ENST00000579485 89 ntBASIC2.48□□□□□ -2.01
KDM1AO60341 MIR5688-201ENST00000580619 83 ntBASIC2.48□□□□□ -2.01
KDM1AO60341 AL136360.1-201ENST00000503377 1900 ntBASIC2.48□□□□□ -2.01
KDM1AO60341 AC245060.5-201ENST00000610778 3293 ntBASIC2.48□□□□□ -2.01
KDM1AO60341 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.47□□□□□ -2.01
KDM1AO60341 AC018630.2-201ENST00000534866 2403 ntBASIC2.47□□□□□ -2.01
KDM1AO60341 SNORA3A-201ENST00000364113 130 ntBASIC2.47□□□□□ -2.01
KDM1AO60341 RNU6-209P-201ENST00000384118 107 ntBASIC2.47□□□□□ -2.01
KDM1AO60341 MIR626-201ENST00000385032 94 ntBASIC2.47□□□□□ -2.01
KDM1AO60341 RNU11-3P-201ENST00000391111 133 ntBASIC2.47□□□□□ -2.01
KDM1AO60341 RNU6-381P-201ENST00000391259 108 ntBASIC2.47□□□□□ -2.01
KDM1AO60341 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.47□□□□□ -2.01
KDM1AO60341 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.47□□□□□ -2.01
KDM1AO60341 AC091021.1-201ENST00000468051 388 ntBASIC2.47□□□□□ -2.01
KDM1AO60341 AC069114.2-201ENST00000604699 304 ntBASIC2.47□□□□□ -2.01
KDM1AO60341 MIR6817-201ENST00000615588 66 ntBASIC2.47□□□□□ -2.01
KDM1AO60341 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.47□□□□□ -2.01
KDM1AO60341 MIR6079-201ENST00000635807 62 ntBASIC2.47□□□□□ -2.01
KDM1AO60341 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.47□□□□□ -2.01
KDM1AO60341 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
KDM1AO60341 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
KDM1AO60341 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
KDM1AO60341 AC100821.1-201ENST00000523153 2479 ntBASIC2.46□□□□□ -2.02
KDM1AO60341 RNA5SP68-201ENST00000363885 119 ntBASIC2.46□□□□□ -2.02
KDM1AO60341 Y_RNA.233-201ENST00000364407 101 ntBASIC2.46□□□□□ -2.02
KDM1AO60341 Y_RNA.270-201ENST00000364693 104 ntBASIC2.46□□□□□ -2.02
KDM1AO60341 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.46□□□□□ -2.02
KDM1AO60341 RN7SKP164-201ENST00000516138 266 ntBASIC2.46□□□□□ -2.02
KDM1AO60341 AC022559.1-201ENST00000520905 205 ntBASIC2.46□□□□□ -2.02
KDM1AO60341 AC021269.2-201ENST00000532318 330 ntBASIC2.46□□□□□ -2.02
KDM1AO60341 AC011604.1-201ENST00000545978 196 ntBASIC2.46□□□□□ -2.02
KDM1AO60341 AC091178.2-201ENST00000584401 117 ntBASIC2.46□□□□□ -2.02
KDM1AO60341 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.46□□□□□ -2.02
KDM1AO60341 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.46□□□□□ -2.02
KDM1AO60341 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
KDM1AO60341 Y_RNA.7-201ENST00000362352 102 ntBASIC2.45□□□□□ -2.02
KDM1AO60341 Y_RNA.24-201ENST00000362508 103 ntBASIC2.45□□□□□ -2.02
KDM1AO60341 RNU6-674P-201ENST00000363831 107 ntBASIC2.45□□□□□ -2.02
KDM1AO60341 RNU6-969P-201ENST00000383900 105 ntBASIC2.45□□□□□ -2.02
KDM1AO60341 Y_RNA.571-201ENST00000384753 98 ntBASIC2.45□□□□□ -2.02
KDM1AO60341 HMGN2P3-201ENST00000433603 273 ntBASIC2.45□□□□□ -2.02
KDM1AO60341 HMGN2P5-201ENST00000436882 273 ntBASIC2.45□□□□□ -2.02
KDM1AO60341 RPS12P2-201ENST00000439728 269 ntBASIC2.45□□□□□ -2.02
KDM1AO60341 RNU7-94P-201ENST00000459576 63 ntBASIC2.45□□□□□ -2.02
KDM1AO60341 SNORD53-201ENST00000579969 78 ntBASIC2.45□□□□□ -2.02
KDM1AO60341 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
KDM1AO60341 Y_RNA.121-201ENST00000363309 113 ntBASIC2.44□□□□□ -2.02
KDM1AO60341 Y_RNA.150-201ENST00000363562 102 ntBASIC2.44□□□□□ -2.02
KDM1AO60341 RNU6-682P-201ENST00000363843 106 ntBASIC2.44□□□□□ -2.02
KDM1AO60341 RNA5SP456-201ENST00000364002 114 ntBASIC2.44□□□□□ -2.02
KDM1AO60341 SNORD114-30-201ENST00000364448 72 ntBASIC2.44□□□□□ -2.02
KDM1AO60341 RNU4-70P-201ENST00000384579 139 ntBASIC2.44□□□□□ -2.02
KDM1AO60341 MIR562-201ENST00000384894 95 ntBASIC2.44□□□□□ -2.02
KDM1AO60341 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.44□□□□□ -2.02
KDM1AO60341 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.44□□□□□ -2.02
KDM1AO60341 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.44□□□□□ -2.02
KDM1AO60341 TRBV12-1-201ENST00000479785 344 ntBASIC2.44□□□□□ -2.02
KDM1AO60341 AL163195.1-201ENST00000496941 348 ntBASIC2.44□□□□□ -2.02
KDM1AO60341 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.44□□□□□ -2.02
KDM1AO60341 RNU6-861P-201ENST00000516745 106 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms