Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU6-1186P-201ENST00000410429 97 ntBASIC1.76□□□□□ -2.13
PRKNO60260 RNU6-847P-201ENST00000411115 108 ntBASIC1.76□□□□□ -2.13
PRKNO60260 RPS26P55-201ENST00000471178 356 ntBASIC1.76□□□□□ -2.13
PRKNO60260 RPS29P11-201ENST00000496507 171 ntBASIC1.76□□□□□ -2.13
PRKNO60260 RNU6-191P-201ENST00000516295 94 ntBASIC1.76□□□□□ -2.13
PRKNO60260 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.76□□□□□ -2.13
PRKNO60260 MIR4529-201ENST00000578110 78 ntBASIC1.76□□□□□ -2.13
PRKNO60260 AL512605.2-201ENST00000592972 256 ntBASIC1.76□□□□□ -2.13
PRKNO60260 AC010900.2-201ENST00000604508 210 ntBASIC1.76□□□□□ -2.13
PRKNO60260 U2.14-201ENST00000615943 113 ntBASIC1.76□□□□□ -2.13
PRKNO60260 AC078938.1-201ENST00000620993 318 ntBASIC1.76□□□□□ -2.13
PRKNO60260 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.76□□□□□ -2.13
PRKNO60260 AC006435.5-201ENST00000624486 112 ntBASIC1.76□□□□□ -2.13
PRKNO60260 AC022513.1-201ENST00000624512 117 ntBASIC1.76□□□□□ -2.13
PRKNO60260 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.76□□□□□ -2.13
PRKNO60260 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
PRKNO60260 CENPCP1-201ENST00000533085 2578 ntBASIC1.75□□□□□ -2.13
PRKNO60260 AC008555.8-201ENST00000623602 2168 ntBASIC1.75□□□□□ -2.13
PRKNO60260 Y_RNA.20-201ENST00000362479 113 ntBASIC1.75□□□□□ -2.13
PRKNO60260 RNU1-96P-201ENST00000364163 162 ntBASIC1.75□□□□□ -2.13
PRKNO60260 SNORA20.1-201ENST00000364790 130 ntBASIC1.75□□□□□ -2.13
PRKNO60260 Y_RNA.352-201ENST00000365439 102 ntBASIC1.75□□□□□ -2.13
PRKNO60260 RNU6-662P-201ENST00000384253 104 ntBASIC1.75□□□□□ -2.13
PRKNO60260 Y_RNA.478-201ENST00000384358 107 ntBASIC1.75□□□□□ -2.13
PRKNO60260 AL117342.1-201ENST00000404861 406 ntBASIC1.75□□□□□ -2.13
PRKNO60260 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.75□□□□□ -2.13
PRKNO60260 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.75□□□□□ -2.13
PRKNO60260 AC099677.2-201ENST00000436385 175 ntBASIC1.75□□□□□ -2.13
PRKNO60260 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.75□□□□□ -2.13
PRKNO60260 RNU6-1337P-201ENST00000516525 95 ntBASIC1.75□□□□□ -2.13
PRKNO60260 RNU6-63P-201ENST00000516690 95 ntBASIC1.75□□□□□ -2.13
PRKNO60260 RNU6-295P-201ENST00000516901 104 ntBASIC1.75□□□□□ -2.13
PRKNO60260 AC007229.1-201ENST00000590455 412 ntBASIC1.75□□□□□ -2.13
PRKNO60260 AL353149.1-201ENST00000610667 244 ntBASIC1.75□□□□□ -2.13
PRKNO60260 MIR8081-201ENST00000611533 95 ntBASIC1.75□□□□□ -2.13
PRKNO60260 U6.73-201ENST00000619194 103 ntBASIC1.75□□□□□ -2.13
PRKNO60260 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PRKNO60260 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
PRKNO60260 Y_RNA.44-201ENST00000362676 108 ntBASIC1.74□□□□□ -2.13
PRKNO60260 Y_RNA.172-201ENST00000363765 102 ntBASIC1.74□□□□□ -2.13
PRKNO60260 SNORD27-201ENST00000363981 72 ntBASIC1.74□□□□□ -2.13
PRKNO60260 Y_RNA.257-201ENST00000364596 102 ntBASIC1.74□□□□□ -2.13
PRKNO60260 Y_RNA.341-201ENST00000365341 102 ntBASIC1.74□□□□□ -2.13
PRKNO60260 RNA5SP37-201ENST00000365420 130 ntBASIC1.74□□□□□ -2.13
PRKNO60260 Y_RNA.539-201ENST00000384635 107 ntBASIC1.74□□□□□ -2.13
PRKNO60260 RNU6-136P-201ENST00000384663 107 ntBASIC1.74□□□□□ -2.13
PRKNO60260 Y_RNA.552-201ENST00000384665 112 ntBASIC1.74□□□□□ -2.13
PRKNO60260 MIR583-201ENST00000384846 75 ntBASIC1.74□□□□□ -2.13
PRKNO60260 RNU6-482P-201ENST00000391068 107 ntBASIC1.74□□□□□ -2.13
PRKNO60260 RNA5SP465-201ENST00000391195 109 ntBASIC1.74□□□□□ -2.13
PRKNO60260 AC019129.1-201ENST00000403786 261 ntBASIC1.74□□□□□ -2.13
PRKNO60260 AL603910.2-201ENST00000407268 136 ntBASIC1.74□□□□□ -2.13
PRKNO60260 RNU6-710P-201ENST00000410424 105 ntBASIC1.74□□□□□ -2.13
PRKNO60260 CYCSP49-201ENST00000420810 319 ntBASIC1.74□□□□□ -2.13
PRKNO60260 AL135790.2-201ENST00000437701 267 ntBASIC1.74□□□□□ -2.13
PRKNO60260 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.74□□□□□ -2.13
PRKNO60260 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.74□□□□□ -2.13
PRKNO60260 RNU7-172P-201ENST00000517125 64 ntBASIC1.74□□□□□ -2.13
PRKNO60260 AC005786.1-201ENST00000588553 154 ntBASIC1.74□□□□□ -2.13
PRKNO60260 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.74□□□□□ -2.13
PRKNO60260 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.73□□□□□ -2.13
PRKNO60260 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
PRKNO60260 SNORD114-7-201ENST00000362520 77 ntBASIC1.73□□□□□ -2.13
PRKNO60260 RNU1-22P-201ENST00000363334 158 ntBASIC1.73□□□□□ -2.13
PRKNO60260 RNA5SP99-201ENST00000364020 114 ntBASIC1.73□□□□□ -2.13
PRKNO60260 Y_RNA.277-201ENST00000364754 102 ntBASIC1.73□□□□□ -2.13
PRKNO60260 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.73□□□□□ -2.13
PRKNO60260 RNU4-52P-201ENST00000384209 138 ntBASIC1.73□□□□□ -2.13
PRKNO60260 SNORD116-13-201ENST00000384408 92 ntBASIC1.73□□□□□ -2.13
PRKNO60260 MIR9-3-201ENST00000385084 90 ntBASIC1.73□□□□□ -2.13
PRKNO60260 RNA5SP323-201ENST00000391094 133 ntBASIC1.73□□□□□ -2.13
PRKNO60260 RNU6-1248P-201ENST00000391096 64 ntBASIC1.73□□□□□ -2.13
PRKNO60260 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.73□□□□□ -2.13
PRKNO60260 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.73□□□□□ -2.13
PRKNO60260 AC097462.1-201ENST00000514125 324 ntBASIC1.73□□□□□ -2.13
PRKNO60260 SNORA27.4-201ENST00000516650 95 ntBASIC1.73□□□□□ -2.13
PRKNO60260 RNU6-111P-201ENST00000517179 105 ntBASIC1.73□□□□□ -2.13
PRKNO60260 AL096840.1-201ENST00000603287 93 ntBASIC1.73□□□□□ -2.13
PRKNO60260 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.73□□□□□ -2.13
PRKNO60260 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PRKNO60260 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
PRKNO60260 Y_RNA.117-201ENST00000363294 101 ntBASIC1.72□□□□□ -2.13
PRKNO60260 RNU6-740P-201ENST00000364734 105 ntBASIC1.72□□□□□ -2.13
PRKNO60260 SNORA8-201ENST00000384574 139 ntBASIC1.72□□□□□ -2.13
PRKNO60260 RNU6-376P-201ENST00000384731 106 ntBASIC1.72□□□□□ -2.13
PRKNO60260 AL512604.1-201ENST00000404812 257 ntBASIC1.72□□□□□ -2.13
PRKNO60260 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
PRKNO60260 EBAG9P1-201ENST00000418955 543 ntBASIC1.72□□□□□ -2.13
PRKNO60260 HSPE1P13-201ENST00000451143 297 ntBASIC1.72□□□□□ -2.13
PRKNO60260 RNA5SP182-201ENST00000516064 82 ntBASIC1.72□□□□□ -2.13
PRKNO60260 RNU6-548P-201ENST00000517083 115 ntBASIC1.72□□□□□ -2.13
PRKNO60260 MIR5094-201ENST00000578766 85 ntBASIC1.72□□□□□ -2.13
PRKNO60260 AC073413.2-201ENST00000604332 360 ntBASIC1.72□□□□□ -2.13
PRKNO60260 AL627230.6-201ENST00000611129 280 ntBASIC1.72□□□□□ -2.13
PRKNO60260 AL359075.3-201ENST00000613288 217 ntBASIC1.72□□□□□ -2.13
PRKNO60260 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.72□□□□□ -2.13
PRKNO60260 AC141273.2-201ENST00000618989 130 ntBASIC1.72□□□□□ -2.13
PRKNO60260 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PRKNO60260 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
PRKNO60260 RNU6-1048P-201ENST00000364054 107 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms