Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RNU6-329P-201ENST00000459618 107 ntBASIC0.67□□□□□ -2.3
CHMP2AO43633 AL049830.1-201ENST00000468034 425 ntBASIC0.67□□□□□ -2.3
CHMP2AO43633 RNU6-720P-201ENST00000516363 108 ntBASIC0.67□□□□□ -2.3
CHMP2AO43633 RNU6-1096P-201ENST00000517089 102 ntBASIC0.67□□□□□ -2.3
CHMP2AO43633 AC090617.3-201ENST00000573670 475 ntBASIC0.67□□□□□ -2.3
CHMP2AO43633 AC009229.3-201ENST00000608056 282 ntBASIC0.67□□□□□ -2.3
CHMP2AO43633 AC093783.1-201ENST00000612976 329 ntBASIC0.67□□□□□ -2.3
CHMP2AO43633 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 Y_RNA.364-201ENST00000365532 101 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 Y_RNA.453-201ENST00000384223 109 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 Y_RNA.498-201ENST00000384460 102 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 AC092423.1-201ENST00000430165 186 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 MTATP6P26-201ENST00000445926 662 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.66□□□□□ -2.3
CHMP2AO43633 RNU6-625P-201ENST00000459412 107 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.66□□□□□ -2.3
CHMP2AO43633 SNORA40.9-201ENST00000515895 93 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 RNU6-322P-201ENST00000516010 103 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 RNU6-966P-201ENST00000516479 104 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 AC105029.1-201ENST00000520250 669 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 AP003484.1-201ENST00000530974 250 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 RPL21P9-201ENST00000556149 474 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 AC018638.8-201ENST00000588755 281 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 AL162424.1-201ENST00000602325 221 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 SNORA28-201ENST00000606769 126 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 AC090517.2-201ENST00000614966 680 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 AC104260.1-201ENST00000616660 539 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 AC127459.3-201ENST00000624328 466 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 AC006435.5-201ENST00000624486 112 ntBASIC0.66□□□□□ -2.3
CHMP2AO43633 SNORA25.3-201ENST00000363205 127 ntBASIC0.65□□□□□ -2.31
CHMP2AO43633 SNORA2.2-201ENST00000365473 135 ntBASIC0.65□□□□□ -2.31
CHMP2AO43633 RNU6-1304P-201ENST00000411374 106 ntBASIC0.65□□□□□ -2.31
CHMP2AO43633 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.65□□□□□ -2.31
CHMP2AO43633 MTND3P21-201ENST00000433774 331 ntBASIC0.65□□□□□ -2.31
CHMP2AO43633 RNU7-21P-201ENST00000459430 62 ntBASIC0.65□□□□□ -2.31
CHMP2AO43633 AP002004.2-201ENST00000531656 154 ntBASIC0.65□□□□□ -2.31
CHMP2AO43633 EIF1P4-201ENST00000572664 335 ntBASIC0.65□□□□□ -2.31
CHMP2AO43633 AC084782.3-201ENST00000612282 578 ntBASIC0.65□□□□□ -2.31
CHMP2AO43633 AC093913.1-201ENST00000614178 329 ntBASIC0.65□□□□□ -2.31
CHMP2AO43633 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.65□□□□□ -2.31
CHMP2AO43633 SNORD68-201ENST00000363214 84 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 Y_RNA.157-201ENST00000363638 102 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 RNU6-961P-201ENST00000363893 105 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 RNA5SP499-201ENST00000363982 119 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 RNY3P11-201ENST00000364153 102 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 RNY1-201ENST00000364228 113 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 RNU6-926P-201ENST00000384075 107 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 SNORD116-13-201ENST00000384408 92 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 MIR516B2-201ENST00000385190 85 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 MIR548K-201ENST00000408406 116 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 RNU4-14P-201ENST00000410858 122 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 AC009161.1-201ENST00000417306 376 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.64□□□□□ -2.31
CHMP2AO43633 MTND4P17-201ENST00000470444 350 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.64□□□□□ -2.31
CHMP2AO43633 AC114811.1-201ENST00000507207 168 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 SNORA25.10-201ENST00000515926 124 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 RNA5SP255-201ENST00000516370 107 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 SNORD111.1-201ENST00000516421 86 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 RNU6-1016P-201ENST00000516689 94 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 AF235103.2-201ENST00000525753 346 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.64□□□□□ -2.31
CHMP2AO43633 AC023827.1-201ENST00000569247 97 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 PRELID3BP2-201ENST00000605362 201 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 uc_338.17-201ENST00000619633 179 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 MIR3674-201ENST00000636576 68 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 AC068137.4-201ENST00000638485 296 ntBASIC0.64□□□□□ -2.31
CHMP2AO43633 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
CHMP2AO43633 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CHMP2AO43633 RNU6-1013P-201ENST00000384180 107 ntBASIC0.63□□□□□ -2.31
CHMP2AO43633 Y_RNA.490-201ENST00000384413 102 ntBASIC0.63□□□□□ -2.31
CHMP2AO43633 AL354751.2-201ENST00000415471 210 ntBASIC0.63□□□□□ -2.31
CHMP2AO43633 AL390729.2-201ENST00000416137 156 ntBASIC0.63□□□□□ -2.31
CHMP2AO43633 AC098934.3-201ENST00000430450 190 ntBASIC0.63□□□□□ -2.31
CHMP2AO43633 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.63□□□□□ -2.31
CHMP2AO43633 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.63□□□□□ -2.31
CHMP2AO43633 AC005828.6-201ENST00000606610 232 ntBASIC0.63□□□□□ -2.31
CHMP2AO43633 AC004832.4-201ENST00000608952 331 ntBASIC0.63□□□□□ -2.31
CHMP2AO43633 AC104465.1-201ENST00000611365 139 ntBASIC0.63□□□□□ -2.31
CHMP2AO43633 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.63□□□□□ -2.31
CHMP2AO43633 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.63□□□□□ -2.31
CHMP2AO43633 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
CHMP2AO43633 RNU6-99P-201ENST00000364721 107 ntBASIC0.62□□□□□ -2.31
CHMP2AO43633 Y_RNA.330-201ENST00000365230 109 ntBASIC0.62□□□□□ -2.31
CHMP2AO43633 Y_RNA.339-201ENST00000365325 102 ntBASIC0.62□□□□□ -2.31
CHMP2AO43633 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
CHMP2AO43633 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
CHMP2AO43633 RNU6-700P-201ENST00000391043 107 ntBASIC0.62□□□□□ -2.31
CHMP2AO43633 RNA5SP482-201ENST00000391269 118 ntBASIC0.62□□□□□ -2.31
CHMP2AO43633 MIR873-201ENST00000401120 77 ntBASIC0.62□□□□□ -2.31
CHMP2AO43633 MTCYBP4-201ENST00000401524 249 ntBASIC0.62□□□□□ -2.31
CHMP2AO43633 SNORD12B-201ENST00000410433 91 ntBASIC0.62□□□□□ -2.31
CHMP2AO43633 AC074085.1-201ENST00000413598 418 ntBASIC0.62□□□□□ -2.31
CHMP2AO43633 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.62□□□□□ -2.31
CHMP2AO43633 AC093019.1-201ENST00000443135 252 ntBASIC0.62□□□□□ -2.31
CHMP2AO43633 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.62□□□□□ -2.31
CHMP2AO43633 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.62□□□□□ -2.31
CHMP2AO43633 RNU6-408P-201ENST00000515910 100 ntBASIC0.62□□□□□ -2.31
CHMP2AO43633 RNU7-41P-201ENST00000515917 61 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms