Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RNU6-570P-201ENST00000517051 105 ntBASIC1.47□□□□□ -2.17
CDX4O14627 CYCSP23-201ENST00000519781 313 ntBASIC1.47□□□□□ -2.17
CDX4O14627 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.47□□□□□ -2.17
CDX4O14627 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.47□□□□□ -2.17
CDX4O14627 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.47□□□□□ -2.17
CDX4O14627 AC004467.1-201ENST00000615678 330 ntBASIC1.47□□□□□ -2.17
CDX4O14627 MIR376A1-201ENST00000616574 68 ntBASIC1.47□□□□□ -2.17
CDX4O14627 MIR8062-201ENST00000621515 85 ntBASIC1.47□□□□□ -2.17
CDX4O14627 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.47□□□□□ -2.17
CDX4O14627 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
CDX4O14627 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.47□□□□□ -2.17
CDX4O14627 snoU2_19.2-201ENST00000363024 80 ntBASIC1.46□□□□□ -2.18
CDX4O14627 Y_RNA.101-201ENST00000363154 102 ntBASIC1.46□□□□□ -2.18
CDX4O14627 SNORD113-8-201ENST00000363497 74 ntBASIC1.46□□□□□ -2.18
CDX4O14627 Y_RNA.286-201ENST00000364813 102 ntBASIC1.46□□□□□ -2.18
CDX4O14627 RNU6-418P-201ENST00000384035 107 ntBASIC1.46□□□□□ -2.18
CDX4O14627 RNU6-975P-201ENST00000384296 105 ntBASIC1.46□□□□□ -2.18
CDX4O14627 RNU6-505P-201ENST00000384427 107 ntBASIC1.46□□□□□ -2.18
CDX4O14627 RNU6-102P-201ENST00000384485 104 ntBASIC1.46□□□□□ -2.18
CDX4O14627 RNU6-713P-201ENST00000384761 107 ntBASIC1.46□□□□□ -2.18
CDX4O14627 MT-TW-201ENST00000387382 68 ntBASIC1.46□□□□□ -2.18
CDX4O14627 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.46□□□□□ -2.18
CDX4O14627 HSPE1P21-201ENST00000438283 308 ntBASIC1.46□□□□□ -2.18
CDX4O14627 ATP5J2P3-201ENST00000451550 258 ntBASIC1.46□□□□□ -2.18
CDX4O14627 AC025465.3-201ENST00000510570 311 ntBASIC1.46□□□□□ -2.18
CDX4O14627 RNU6-1143P-201ENST00000516125 104 ntBASIC1.46□□□□□ -2.18
CDX4O14627 RNU6-1146P-201ENST00000516282 102 ntBASIC1.46□□□□□ -2.18
CDX4O14627 Y_RNA.713-201ENST00000517013 96 ntBASIC1.46□□□□□ -2.18
CDX4O14627 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.46□□□□□ -2.18
CDX4O14627 AC005176.2-201ENST00000596933 147 ntBASIC1.46□□□□□ -2.18
CDX4O14627 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.46□□□□□ -2.18
CDX4O14627 AC022709.1-201ENST00000615967 87 ntBASIC1.46□□□□□ -2.18
CDX4O14627 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.46□□□□□ -2.18
CDX4O14627 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CDX4O14627 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
CDX4O14627 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.45□□□□□ -2.18
CDX4O14627 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
CDX4O14627 MIR340-201ENST00000362125 95 ntBASIC1.45□□□□□ -2.18
CDX4O14627 Y_RNA.193-201ENST00000363979 102 ntBASIC1.45□□□□□ -2.18
CDX4O14627 RNU6-454P-201ENST00000364292 107 ntBASIC1.45□□□□□ -2.18
CDX4O14627 SNORA72.2-201ENST00000365028 127 ntBASIC1.45□□□□□ -2.18
CDX4O14627 RNU6-1175P-201ENST00000365200 107 ntBASIC1.45□□□□□ -2.18
CDX4O14627 SNORD63-201ENST00000384262 68 ntBASIC1.45□□□□□ -2.18
CDX4O14627 Y_RNA.461-201ENST00000384263 103 ntBASIC1.45□□□□□ -2.18
CDX4O14627 RNU6-472P-201ENST00000384299 107 ntBASIC1.45□□□□□ -2.18
CDX4O14627 Y_RNA.483-201ENST00000384380 101 ntBASIC1.45□□□□□ -2.18
CDX4O14627 Y_RNA.570-201ENST00000384750 101 ntBASIC1.45□□□□□ -2.18
CDX4O14627 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CDX4O14627 RNA5SP475-201ENST00000410568 110 ntBASIC1.45□□□□□ -2.18
CDX4O14627 AC008134.1-201ENST00000420943 193 ntBASIC1.45□□□□□ -2.18
CDX4O14627 NDUFB4P10-201ENST00000452541 359 ntBASIC1.45□□□□□ -2.18
CDX4O14627 RNU7-57P-201ENST00000459540 60 ntBASIC1.45□□□□□ -2.18
CDX4O14627 RNU7-110P-201ENST00000516891 62 ntBASIC1.45□□□□□ -2.18
CDX4O14627 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.45□□□□□ -2.18
CDX4O14627 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.45□□□□□ -2.18
CDX4O14627 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.45□□□□□ -2.18
CDX4O14627 MIR4423-201ENST00000580922 80 ntBASIC1.45□□□□□ -2.18
CDX4O14627 MIR4713-201ENST00000582691 75 ntBASIC1.45□□□□□ -2.18
CDX4O14627 MIR3149-201ENST00000584629 83 ntBASIC1.45□□□□□ -2.18
CDX4O14627 AC011373.1-201ENST00000607270 237 ntBASIC1.45□□□□□ -2.18
CDX4O14627 U4.1-201ENST00000620349 87 ntBASIC1.45□□□□□ -2.18
CDX4O14627 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.45□□□□□ -2.18
CDX4O14627 MIR3674-201ENST00000636576 68 ntBASIC1.45□□□□□ -2.18
CDX4O14627 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CDX4O14627 Y_RNA.16-201ENST00000362421 102 ntBASIC1.44□□□□□ -2.18
CDX4O14627 Y_RNA.84-201ENST00000363011 104 ntBASIC1.44□□□□□ -2.18
CDX4O14627 U3.8-201ENST00000363675 217 ntBASIC1.44□□□□□ -2.18
CDX4O14627 RNU6-1264P-201ENST00000383891 107 ntBASIC1.44□□□□□ -2.18
CDX4O14627 Y_RNA.462-201ENST00000384268 102 ntBASIC1.44□□□□□ -2.18
CDX4O14627 Y_RNA.541-201ENST00000384640 113 ntBASIC1.44□□□□□ -2.18
CDX4O14627 MIR1302-3-201ENST00000408128 138 ntBASIC1.44□□□□□ -2.18
CDX4O14627 RNU5A-5P-201ENST00000411054 116 ntBASIC1.44□□□□□ -2.18
CDX4O14627 AL354695.1-201ENST00000427935 228 ntBASIC1.44□□□□□ -2.18
CDX4O14627 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.44□□□□□ -2.18
CDX4O14627 RNU6-496P-201ENST00000516145 99 ntBASIC1.44□□□□□ -2.18
CDX4O14627 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.44□□□□□ -2.18
CDX4O14627 AC069114.2-201ENST00000604699 304 ntBASIC1.44□□□□□ -2.18
CDX4O14627 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.44□□□□□ -2.18
CDX4O14627 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.44□□□□□ -2.18
CDX4O14627 snoZ196.1-201ENST00000625269 89 ntBASIC1.44□□□□□ -2.18
CDX4O14627 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CDX4O14627 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CDX4O14627 RNU1-22P-201ENST00000363334 158 ntBASIC1.43□□□□□ -2.18
CDX4O14627 SNORD114-26-201ENST00000363543 72 ntBASIC1.43□□□□□ -2.18
CDX4O14627 Y_RNA.230-201ENST00000364348 109 ntBASIC1.43□□□□□ -2.18
CDX4O14627 Y_RNA.331-201ENST00000365267 102 ntBASIC1.43□□□□□ -2.18
CDX4O14627 RNU6-1310P-201ENST00000384153 107 ntBASIC1.43□□□□□ -2.18
CDX4O14627 Y_RNA.446-201ENST00000384178 104 ntBASIC1.43□□□□□ -2.18
CDX4O14627 Y_RNA.452-201ENST00000384202 108 ntBASIC1.43□□□□□ -2.18
CDX4O14627 MIR515-2-201ENST00000384883 83 ntBASIC1.43□□□□□ -2.18
CDX4O14627 MIR515-1-201ENST00000384884 83 ntBASIC1.43□□□□□ -2.18
CDX4O14627 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CDX4O14627 Y_RNA.581-201ENST00000391017 97 ntBASIC1.43□□□□□ -2.18
CDX4O14627 MIR1302-6-201ENST00000408466 90 ntBASIC1.43□□□□□ -2.18
CDX4O14627 RNU6-1203P-201ENST00000410703 110 ntBASIC1.43□□□□□ -2.18
CDX4O14627 RNU6-1199P-201ENST00000411249 104 ntBASIC1.43□□□□□ -2.18
CDX4O14627 RNU6-57P-201ENST00000411348 103 ntBASIC1.43□□□□□ -2.18
CDX4O14627 AC009310.1-201ENST00000414414 451 ntBASIC1.43□□□□□ -2.18
CDX4O14627 EBAG9P1-201ENST00000418955 543 ntBASIC1.43□□□□□ -2.18
CDX4O14627 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 267.1 ms