Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.24
SLC28A1O00337 Y_RNA.101-201ENST00000363154 102 ntBASIC1.08□□□□□ -2.24
SLC28A1O00337 Y_RNA.390-201ENST00000383932 102 ntBASIC1.08□□□□□ -2.24
SLC28A1O00337 MIR559-201ENST00000385188 96 ntBASIC1.08□□□□□ -2.24
SLC28A1O00337 RNY4P36-201ENST00000391116 96 ntBASIC1.08□□□□□ -2.24
SLC28A1O00337 Y_RNA.621-201ENST00000411065 96 ntBASIC1.08□□□□□ -2.24
SLC28A1O00337 AC104332.1-201ENST00000440471 797 ntBASIC1.08□□□□□ -2.24
SLC28A1O00337 RPL39P39-201ENST00000455840 151 ntBASIC1.08□□□□□ -2.24
SLC28A1O00337 AL163540.1-201ENST00000485382 386 ntBASIC1.08□□□□□ -2.24
SLC28A1O00337 CYCTP-201ENST00000504253 315 ntBASIC1.08□□□□□ -2.24
SLC28A1O00337 RNU6-947P-201ENST00000516264 106 ntBASIC1.08□□□□□ -2.24
SLC28A1O00337 RNU6-277P-201ENST00000516272 106 ntBASIC1.08□□□□□ -2.24
SLC28A1O00337 RNA5SP404-201ENST00000517118 132 ntBASIC1.08□□□□□ -2.24
SLC28A1O00337 AC005730.3-201ENST00000583067 366 ntBASIC1.08□□□□□ -2.24
SLC28A1O00337 UBE2V2P2-201ENST00000587677 504 ntBASIC1.08□□□□□ -2.24
SLC28A1O00337 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.08□□□□□ -2.24
SLC28A1O00337 RNU6-626P-201ENST00000363354 107 ntBASIC1.07□□□□□ -2.24
SLC28A1O00337 Y_RNA.140-201ENST00000363474 103 ntBASIC1.07□□□□□ -2.24
SLC28A1O00337 RNU6-324P-201ENST00000363957 106 ntBASIC1.07□□□□□ -2.24
SLC28A1O00337 RNU6-20P-201ENST00000384106 107 ntBASIC1.07□□□□□ -2.24
SLC28A1O00337 SNORA70.7-201ENST00000384159 133 ntBASIC1.07□□□□□ -2.24
SLC28A1O00337 RNU6-163P-201ENST00000384396 106 ntBASIC1.07□□□□□ -2.24
SLC28A1O00337 MIR891A-201ENST00000401237 79 ntBASIC1.07□□□□□ -2.24
SLC28A1O00337 RPS4XP11-201ENST00000446897 772 ntBASIC1.07□□□□□ -2.24
SLC28A1O00337 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.07□□□□□ -2.24
SLC28A1O00337 MIR4659A-201ENST00000580269 81 ntBASIC1.07□□□□□ -2.24
SLC28A1O00337 MIR4298-201ENST00000584380 73 ntBASIC1.07□□□□□ -2.24
SLC28A1O00337 AC120024.3-201ENST00000603167 156 ntBASIC1.07□□□□□ -2.24
SLC28A1O00337 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SLC28A1O00337 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.06□□□□□ -2.24
SLC28A1O00337 SNORD68-201ENST00000363214 84 ntBASIC1.06□□□□□ -2.24
SLC28A1O00337 RNU6-1283P-201ENST00000365314 105 ntBASIC1.06□□□□□ -2.24
SLC28A1O00337 RNU6-1040P-201ENST00000383974 107 ntBASIC1.06□□□□□ -2.24
SLC28A1O00337 RNU6-1080P-201ENST00000383982 107 ntBASIC1.06□□□□□ -2.24
SLC28A1O00337 SNORD116-29-201ENST00000384516 83 ntBASIC1.06□□□□□ -2.24
SLC28A1O00337 RNU6-1105P-201ENST00000384774 107 ntBASIC1.06□□□□□ -2.24
SLC28A1O00337 RNU6-1054P-201ENST00000411293 104 ntBASIC1.06□□□□□ -2.24
SLC28A1O00337 AP1B1P2-201ENST00000416196 106 ntBASIC1.06□□□□□ -2.24
SLC28A1O00337 BTF3P4-201ENST00000418852 495 ntBASIC1.06□□□□□ -2.24
SLC28A1O00337 AC048334.1-201ENST00000477975 159 ntBASIC1.06□□□□□ -2.24
SLC28A1O00337 AC093852.1-201ENST00000503587 266 ntBASIC1.06□□□□□ -2.24
SLC28A1O00337 SNORD116-28-201ENST00000516123 91 ntBASIC1.06□□□□□ -2.24
SLC28A1O00337 RNU6-155P-201ENST00000516347 100 ntBASIC1.06□□□□□ -2.24
SLC28A1O00337 RNU6-699P-201ENST00000517081 110 ntBASIC1.06□□□□□ -2.24
SLC28A1O00337 RNU6-1116P-201ENST00000517269 99 ntBASIC1.06□□□□□ -2.24
SLC28A1O00337 MIR6078-201ENST00000611069 100 ntBASIC1.06□□□□□ -2.24
SLC28A1O00337 AC011476.5-201ENST00000615594 130 ntBASIC1.06□□□□□ -2.24
SLC28A1O00337 AC138305.3-201ENST00000624988 240 ntBASIC1.06□□□□□ -2.24
SLC28A1O00337 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.06□□□□□ -2.24
SLC28A1O00337 Y_RNA.27-201ENST00000362540 103 ntBASIC1.05□□□□□ -2.24
SLC28A1O00337 RNU4-79P-201ENST00000362764 141 ntBASIC1.05□□□□□ -2.24
SLC28A1O00337 RNU6-833P-201ENST00000363486 107 ntBASIC1.05□□□□□ -2.24
SLC28A1O00337 Y_RNA.230-201ENST00000364348 109 ntBASIC1.05□□□□□ -2.24
SLC28A1O00337 SNORD116-13-201ENST00000384408 92 ntBASIC1.05□□□□□ -2.24
SLC28A1O00337 RNU6-910P-201ENST00000390844 107 ntBASIC1.05□□□□□ -2.24
SLC28A1O00337 AC096644.2-201ENST00000429278 159 ntBASIC1.05□□□□□ -2.24
SLC28A1O00337 AC245047.7-201ENST00000440265 293 ntBASIC1.05□□□□□ -2.24
SLC28A1O00337 RPEP5-201ENST00000441137 268 ntBASIC1.05□□□□□ -2.24
SLC28A1O00337 CHEK2P4-201ENST00000450340 246 ntBASIC1.05□□□□□ -2.24
SLC28A1O00337 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.05□□□□□ -2.24
SLC28A1O00337 Y_RNA.718-201ENST00000517110 102 ntBASIC1.05□□□□□ -2.24
SLC28A1O00337 VN1R91P-201ENST00000594377 169 ntBASIC1.05□□□□□ -2.24
SLC28A1O00337 AP000942.3-201ENST00000603702 160 ntBASIC1.05□□□□□ -2.24
SLC28A1O00337 AL132765.2-201ENST00000610812 351 ntBASIC1.05□□□□□ -2.24
SLC28A1O00337 AC027279.3-201ENST00000625055 122 ntBASIC1.05□□□□□ -2.24
SLC28A1O00337 U6.92-201ENST00000636464 89 ntBASIC1.05□□□□□ -2.24
SLC28A1O00337 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.04□□□□□ -2.24
SLC28A1O00337 Y_RNA.446-201ENST00000384178 104 ntBASIC1.04□□□□□ -2.24
SLC28A1O00337 RNU2-61P-201ENST00000411069 191 ntBASIC1.04□□□□□ -2.24
SLC28A1O00337 PIGPP3-201ENST00000425307 415 ntBASIC1.04□□□□□ -2.24
SLC28A1O00337 AC011604.1-201ENST00000545978 196 ntBASIC1.04□□□□□ -2.24
SLC28A1O00337 AL391987.6-201ENST00000305671 199 ntBASIC1.03□□□□□ -2.24
SLC28A1O00337 SNORA72.1-201ENST00000363485 129 ntBASIC1.03□□□□□ -2.24
SLC28A1O00337 RNU1-124P-201ENST00000363861 145 ntBASIC1.03□□□□□ -2.24
SLC28A1O00337 Y_RNA.428-201ENST00000384078 102 ntBASIC1.03□□□□□ -2.24
SLC28A1O00337 RNU6-708P-201ENST00000384217 107 ntBASIC1.03□□□□□ -2.24
SLC28A1O00337 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.03□□□□□ -2.24
SLC28A1O00337 MTCO2P27-201ENST00000420740 428 ntBASIC1.03□□□□□ -2.24
SLC28A1O00337 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.03□□□□□ -2.24
SLC28A1O00337 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.03□□□□□ -2.24
SLC28A1O00337 LINC01399-202ENST00000458450 244 ntBASIC1.03□□□□□ -2.24
SLC28A1O00337 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.03□□□□□ -2.24
SLC28A1O00337 RPS23P4-201ENST00000487908 423 ntBASIC1.03□□□□□ -2.24
SLC28A1O00337 AC022616.4-201ENST00000522985 181 ntBASIC1.03□□□□□ -2.24
SLC28A1O00337 AC006600.1-201ENST00000572529 153 ntBASIC1.03□□□□□ -2.24
SLC28A1O00337 FAM106DP-201ENST00000586416 501 ntBASIC1.03□□□□□ -2.24
SLC28A1O00337 AC004832.4-201ENST00000608952 331 ntBASIC1.03□□□□□ -2.24
SLC28A1O00337 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.03□□□□□ -2.24
SLC28A1O00337 AC084781.2-201ENST00000615568 161 ntBASIC1.03□□□□□ -2.24
SLC28A1O00337 AL591926.4-201ENST00000616895 298 ntBASIC1.03□□□□□ -2.24
SLC28A1O00337 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.03□□□□□ -2.24
SLC28A1O00337 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
SLC28A1O00337 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
SLC28A1O00337 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
SLC28A1O00337 MIR526A1-201ENST00000384897 85 ntBASIC1.02□□□□□ -2.25
SLC28A1O00337 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.02□□□□□ -2.25
SLC28A1O00337 RNU6-1199P-201ENST00000411249 104 ntBASIC1.02□□□□□ -2.25
SLC28A1O00337 MRPL35P3-201ENST00000421557 364 ntBASIC1.02□□□□□ -2.25
SLC28A1O00337 OR2A41P-201ENST00000473586 105 ntBASIC1.02□□□□□ -2.25
SLC28A1O00337 SNORD111.1-201ENST00000516421 86 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms