Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AC018448.1-201ENST00000552843 316 ntBASIC0.36□□□□□ -2.35
DFFAO00273 AC011195.1-201ENST00000578177 177 ntBASIC0.36□□□□□ -2.35
DFFAO00273 MIR4762-201ENST00000585261 75 ntBASIC0.36□□□□□ -2.35
DFFAO00273 AC104260.1-201ENST00000616660 539 ntBASIC0.36□□□□□ -2.35
DFFAO00273 SNORD114-7-201ENST00000362520 77 ntBASIC0.35□□□□□ -2.35
DFFAO00273 RNU6-454P-201ENST00000364292 107 ntBASIC0.35□□□□□ -2.35
DFFAO00273 MIR136-201ENST00000385207 82 ntBASIC0.35□□□□□ -2.35
DFFAO00273 SNORD111-201ENST00000408139 94 ntBASIC0.35□□□□□ -2.35
DFFAO00273 RNU6-994P-201ENST00000410507 111 ntBASIC0.35□□□□□ -2.35
DFFAO00273 AL354751.2-201ENST00000415471 210 ntBASIC0.35□□□□□ -2.35
DFFAO00273 ELOCP24-201ENST00000456370 334 ntBASIC0.35□□□□□ -2.35
DFFAO00273 AC010486.3-201ENST00000511602 785 ntBASIC0.35□□□□□ -2.35
DFFAO00273 AF235103.2-201ENST00000525753 346 ntBASIC0.35□□□□□ -2.35
DFFAO00273 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.35□□□□□ -2.35
DFFAO00273 MIR4764-201ENST00000580680 88 ntBASIC0.35□□□□□ -2.35
DFFAO00273 Z99129.1-201ENST00000612510 255 ntBASIC0.35□□□□□ -2.35
DFFAO00273 AL591926.4-201ENST00000616895 298 ntBASIC0.35□□□□□ -2.35
DFFAO00273 AC134026.1-201ENST00000623249 2239 ntBASIC0.34□□□□□ -2.35
DFFAO00273 RNU6-1059P-201ENST00000363752 98 ntBASIC0.34□□□□□ -2.36
DFFAO00273 AC117470.1-201ENST00000381974 330 ntBASIC0.34□□□□□ -2.36
DFFAO00273 RNY1P8-201ENST00000383970 114 ntBASIC0.34□□□□□ -2.36
DFFAO00273 Y_RNA.498-201ENST00000384460 102 ntBASIC0.34□□□□□ -2.36
DFFAO00273 MIR15B-201ENST00000385045 98 ntBASIC0.34□□□□□ -2.36
DFFAO00273 RNU6-332P-201ENST00000391193 108 ntBASIC0.34□□□□□ -2.36
DFFAO00273 snoU13.18-201ENST00000459483 104 ntBASIC0.34□□□□□ -2.36
DFFAO00273 RN7SKP12-201ENST00000516275 143 ntBASIC0.34□□□□□ -2.36
DFFAO00273 RNU7-43P-201ENST00000516554 64 ntBASIC0.34□□□□□ -2.36
DFFAO00273 RNU11-2P-201ENST00000516898 142 ntBASIC0.34□□□□□ -2.36
DFFAO00273 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
DFFAO00273 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.34□□□□□ -2.36
DFFAO00273 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.34□□□□□ -2.36
DFFAO00273 MIR3942-201ENST00000585264 109 ntBASIC0.34□□□□□ -2.36
DFFAO00273 AP000770.2-201ENST00000623694 100 ntBASIC0.34□□□□□ -2.36
DFFAO00273 SNORA36.2-201ENST00000384004 127 ntBASIC0.33□□□□□ -2.36
DFFAO00273 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
DFFAO00273 Y_RNA.508-201ENST00000384502 114 ntBASIC0.33□□□□□ -2.36
DFFAO00273 MIR1827-201ENST00000408549 66 ntBASIC0.33□□□□□ -2.36
DFFAO00273 RNA5SP222-201ENST00000411039 105 ntBASIC0.33□□□□□ -2.36
DFFAO00273 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.33□□□□□ -2.36
DFFAO00273 MRPS18CP6-201ENST00000423587 223 ntBASIC0.33□□□□□ -2.36
DFFAO00273 DLGAP5P1-201ENST00000430307 464 ntBASIC0.33□□□□□ -2.36
DFFAO00273 RNU6-625P-201ENST00000459412 107 ntBASIC0.33□□□□□ -2.36
DFFAO00273 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.33□□□□□ -2.36
DFFAO00273 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.33□□□□□ -2.36
DFFAO00273 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.33□□□□□ -2.36
DFFAO00273 MIR3674-201ENST00000636576 68 ntBASIC0.33□□□□□ -2.36
DFFAO00273 Y_RNA.38-201ENST00000362617 102 ntBASIC0.32□□□□□ -2.36
DFFAO00273 Y_RNA.243-201ENST00000364481 109 ntBASIC0.32□□□□□ -2.36
DFFAO00273 VTRNA1-3-201ENST00000365645 89 ntBASIC0.32□□□□□ -2.36
DFFAO00273 RNU6-842P-201ENST00000384269 107 ntBASIC0.32□□□□□ -2.36
DFFAO00273 SNORD105-201ENST00000386910 85 ntBASIC0.32□□□□□ -2.36
DFFAO00273 MIR190B-201ENST00000401119 79 ntBASIC0.32□□□□□ -2.36
DFFAO00273 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.32□□□□□ -2.36
DFFAO00273 RNA5SP511-201ENST00000410487 115 ntBASIC0.32□□□□□ -2.36
DFFAO00273 Y_RNA.621-201ENST00000411065 96 ntBASIC0.32□□□□□ -2.36
DFFAO00273 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.32□□□□□ -2.36
DFFAO00273 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.32□□□□□ -2.36
DFFAO00273 MTCO2P12-201ENST00000427426 682 ntBASIC0.32□□□□□ -2.36
DFFAO00273 USP9YP30-201ENST00000430729 455 ntBASIC0.32□□□□□ -2.36
DFFAO00273 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.32□□□□□ -2.36
DFFAO00273 SNORA18.7-201ENST00000516910 131 ntBASIC0.32□□□□□ -2.36
DFFAO00273 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.32□□□□□ -2.36
DFFAO00273 MIR5701-3-201ENST00000578890 82 ntBASIC0.32□□□□□ -2.36
DFFAO00273 MIR5701-1-201ENST00000585138 82 ntBASIC0.32□□□□□ -2.36
DFFAO00273 MIR5701-2-201ENST00000615634 82 ntBASIC0.32□□□□□ -2.36
DFFAO00273 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
DFFAO00273 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.31□□□□□ -2.36
DFFAO00273 Y_RNA.48-201ENST00000362710 103 ntBASIC0.31□□□□□ -2.36
DFFAO00273 RNY1-201ENST00000364228 113 ntBASIC0.31□□□□□ -2.36
DFFAO00273 SNORD113.3-201ENST00000364630 78 ntBASIC0.31□□□□□ -2.36
DFFAO00273 Y_RNA.361-201ENST00000365515 120 ntBASIC0.31□□□□□ -2.36
DFFAO00273 Y_RNA.364-201ENST00000365532 101 ntBASIC0.31□□□□□ -2.36
DFFAO00273 RNA5SP475-201ENST00000410568 110 ntBASIC0.31□□□□□ -2.36
DFFAO00273 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.31□□□□□ -2.36
DFFAO00273 AL392103.1-201ENST00000447000 198 ntBASIC0.31□□□□□ -2.36
DFFAO00273 SNORA68.3-201ENST00000515906 83 ntBASIC0.31□□□□□ -2.36
DFFAO00273 RNU1-54P-201ENST00000517181 120 ntBASIC0.31□□□□□ -2.36
DFFAO00273 AF250324.2-201ENST00000608299 610 ntBASIC0.31□□□□□ -2.36
DFFAO00273 MIR1321-201ENST00000637766 79 ntBASIC0.31□□□□□ -2.36
DFFAO00273 AC100810.6-201ENST00000638068 285 ntBASIC0.31□□□□□ -2.36
DFFAO00273 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
DFFAO00273 RNU6-879P-201ENST00000364328 108 ntBASIC0.3□□□□□ -2.36
DFFAO00273 MIR598-201ENST00000384868 97 ntBASIC0.3□□□□□ -2.36
DFFAO00273 RNU6-1304P-201ENST00000411374 106 ntBASIC0.3□□□□□ -2.36
DFFAO00273 MTND1P26-201ENST00000440488 538 ntBASIC0.3□□□□□ -2.36
DFFAO00273 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
DFFAO00273 UBE2V1P7-201ENST00000446395 340 ntBASIC0.3□□□□□ -2.36
DFFAO00273 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
DFFAO00273 RNU6-864P-201ENST00000516256 108 ntBASIC0.3□□□□□ -2.36
DFFAO00273 RNU6-273P-201ENST00000516937 96 ntBASIC0.3□□□□□ -2.36
DFFAO00273 AC245008.1-201ENST00000608123 476 ntBASIC0.3□□□□□ -2.36
DFFAO00273 RNU6-654P-201ENST00000364373 107 ntBASIC0.29□□□□□ -2.36
DFFAO00273 MIR140-201ENST00000385282 100 ntBASIC0.29□□□□□ -2.36
DFFAO00273 MIR1302-7-201ENST00000408841 72 ntBASIC0.29□□□□□ -2.36
DFFAO00273 MTND1P4-201ENST00000435196 415 ntBASIC0.29□□□□□ -2.36
DFFAO00273 SNORD5.1-201ENST00000458800 75 ntBASIC0.29□□□□□ -2.36
DFFAO00273 RNU7-87P-201ENST00000459343 62 ntBASIC0.29□□□□□ -2.36
DFFAO00273 SNORD123-201ENST00000459473 70 ntBASIC0.29□□□□□ -2.36
DFFAO00273 SNORA40.9-201ENST00000515895 93 ntBASIC0.29□□□□□ -2.36
DFFAO00273 Y_RNA.673-201ENST00000516306 88 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms