Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 SNORA32-201ENST00000384072 121 ntBASIC4.83□□□□□ -1.64
SPDYE4A6NLX3 SNORA11.4-201ENST00000408823 129 ntBASIC4.83□□□□□ -1.64
SPDYE4A6NLX3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.83□□□□□ -1.64
SPDYE4A6NLX3 RPS12P2-201ENST00000439728 269 ntBASIC4.83□□□□□ -1.64
SPDYE4A6NLX3 AL360157.1-201ENST00000565962 87 ntBASIC4.83□□□□□ -1.64
SPDYE4A6NLX3 AC091178.1-203ENST00000584586 279 ntBASIC4.83□□□□□ -1.64
SPDYE4A6NLX3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.83□□□□□ -1.64
SPDYE4A6NLX3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SPDYE4A6NLX3 MAPK10-322ENST00000641485 4530 ntBASIC4.83□□□□□ -1.64
SPDYE4A6NLX3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SPDYE4A6NLX3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SPDYE4A6NLX3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SPDYE4A6NLX3 RNU1-44P-201ENST00000384453 163 ntBASIC4.82□□□□□ -1.64
SPDYE4A6NLX3 MIR889-201ENST00000401280 79 ntBASIC4.82□□□□□ -1.64
SPDYE4A6NLX3 RNU7-67P-201ENST00000459003 62 ntBASIC4.82□□□□□ -1.64
SPDYE4A6NLX3 AL049873.1-201ENST00000480540 376 ntBASIC4.82□□□□□ -1.64
SPDYE4A6NLX3 RNU6-958P-201ENST00000516995 106 ntBASIC4.82□□□□□ -1.64
SPDYE4A6NLX3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SPDYE4A6NLX3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.82□□□□□ -1.64
SPDYE4A6NLX3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SPDYE4A6NLX3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SPDYE4A6NLX3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SPDYE4A6NLX3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SPDYE4A6NLX3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SPDYE4A6NLX3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SPDYE4A6NLX3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SPDYE4A6NLX3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SPDYE4A6NLX3 Y_RNA.140-201ENST00000363474 103 ntBASIC4.81□□□□□ -1.64
SPDYE4A6NLX3 SNORD38.1-201ENST00000363863 68 ntBASIC4.81□□□□□ -1.64
SPDYE4A6NLX3 RNA5SP493-201ENST00000364115 91 ntBASIC4.81□□□□□ -1.64
SPDYE4A6NLX3 Y_RNA.247-201ENST00000364500 92 ntBASIC4.81□□□□□ -1.64
SPDYE4A6NLX3 Y_RNA.370-201ENST00000365589 108 ntBASIC4.81□□□□□ -1.64
SPDYE4A6NLX3 AL359837.1-201ENST00000381357 287 ntBASIC4.81□□□□□ -1.64
SPDYE4A6NLX3 MIR23A-201ENST00000385245 73 ntBASIC4.81□□□□□ -1.64
SPDYE4A6NLX3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC4.81□□□□□ -1.64
SPDYE4A6NLX3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC4.81□□□□□ -1.64
SPDYE4A6NLX3 AC091153.1-201ENST00000466297 402 ntBASIC4.81□□□□□ -1.64
SPDYE4A6NLX3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SPDYE4A6NLX3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC4.81□□□□□ -1.64
SPDYE4A6NLX3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SPDYE4A6NLX3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SPDYE4A6NLX3 AC091152.2-201ENST00000591628 2569 ntBASIC4.8□□□□□ -1.64
SPDYE4A6NLX3 RNU6-1163P-201ENST00000364516 107 ntBASIC4.8□□□□□ -1.64
SPDYE4A6NLX3 SNORA26.6-201ENST00000391256 115 ntBASIC4.8□□□□□ -1.64
SPDYE4A6NLX3 RN7SL98P-201ENST00000462271 300 ntBASIC4.8□□□□□ -1.64
SPDYE4A6NLX3 AC105129.1-201ENST00000560250 297 ntBASIC4.8□□□□□ -1.64
SPDYE4A6NLX3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC4.8□□□□□ -1.64
SPDYE4A6NLX3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC4.8□□□□□ -1.64
SPDYE4A6NLX3 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.8□□□□□ -1.64
SPDYE4A6NLX3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SPDYE4A6NLX3 RNU6-833P-201ENST00000363486 107 ntBASIC4.79□□□□□ -1.64
SPDYE4A6NLX3 MIR659-201ENST00000384963 97 ntBASIC4.79□□□□□ -1.64
SPDYE4A6NLX3 MIR1262-201ENST00000408276 93 ntBASIC4.79□□□□□ -1.64
SPDYE4A6NLX3 AL445685.2-201ENST00000422551 342 ntBASIC4.79□□□□□ -1.64
SPDYE4A6NLX3 AC003685.2-201ENST00000422795 395 ntBASIC4.79□□□□□ -1.64
SPDYE4A6NLX3 UBL5P1-201ENST00000507979 193 ntBASIC4.79□□□□□ -1.64
SPDYE4A6NLX3 RNU7-2P-201ENST00000516096 62 ntBASIC4.79□□□□□ -1.64
SPDYE4A6NLX3 CYCSP29-201ENST00000533731 318 ntBASIC4.79□□□□□ -1.64
SPDYE4A6NLX3 MIR92B-201ENST00000607575 96 ntBASIC4.79□□□□□ -1.64
SPDYE4A6NLX3 MIR6717-201ENST00000622747 73 ntBASIC4.79□□□□□ -1.64
SPDYE4A6NLX3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC4.79□□□□□ -1.64
SPDYE4A6NLX3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SPDYE4A6NLX3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SPDYE4A6NLX3 PWAR6-201ENST00000552334 4618 ntBASIC4.79□□□□□ -1.64
SPDYE4A6NLX3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SPDYE4A6NLX3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.78□□□□□ -1.64
SPDYE4A6NLX3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SPDYE4A6NLX3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SPDYE4A6NLX3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SPDYE4A6NLX3 MIR383-201ENST00000362257 73 ntBASIC4.78□□□□□ -1.64
SPDYE4A6NLX3 RPS29P29-201ENST00000456396 171 ntBASIC4.78□□□□□ -1.64
SPDYE4A6NLX3 AC091905.2-201ENST00000623143 306 ntBASIC4.78□□□□□ -1.64
SPDYE4A6NLX3 SNORD3E-202ENST00000627253 216 ntBASIC4.78□□□□□ -1.64
SPDYE4A6NLX3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.78□□□□□ -1.64
SPDYE4A6NLX3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SPDYE4A6NLX3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SPDYE4A6NLX3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SPDYE4A6NLX3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.77□□□□□ -1.65
SPDYE4A6NLX3 SNORA37-201ENST00000384504 129 ntBASIC4.77□□□□□ -1.65
SPDYE4A6NLX3 RNU1-101P-201ENST00000391171 127 ntBASIC4.77□□□□□ -1.65
SPDYE4A6NLX3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SPDYE4A6NLX3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SPDYE4A6NLX3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SPDYE4A6NLX3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SPDYE4A6NLX3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SPDYE4A6NLX3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SPDYE4A6NLX3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SPDYE4A6NLX3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SPDYE4A6NLX3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SPDYE4A6NLX3 RNU1-89P-201ENST00000384592 164 ntBASIC4.76□□□□□ -1.65
SPDYE4A6NLX3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC4.76□□□□□ -1.65
SPDYE4A6NLX3 MIR3169-201ENST00000578032 83 ntBASIC4.76□□□□□ -1.65
SPDYE4A6NLX3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SPDYE4A6NLX3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.75□□□□□ -1.65
SPDYE4A6NLX3 SPRR2C-201ENST00000290702 219 ntBASIC4.75□□□□□ -1.65
SPDYE4A6NLX3 RNU6-23P-201ENST00000363283 107 ntBASIC4.75□□□□□ -1.65
SPDYE4A6NLX3 RNA5SP366-201ENST00000365454 123 ntBASIC4.75□□□□□ -1.65
SPDYE4A6NLX3 RNU6-220P-201ENST00000390919 107 ntBASIC4.75□□□□□ -1.65
SPDYE4A6NLX3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC4.75□□□□□ -1.65
SPDYE4A6NLX3 RN7SKP57-201ENST00000517248 293 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms